RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 PPARAQ07869 468 aa8.55□□□□□ -1.04
SMARCC1-202ENST00000425518 LONRF2Q1L5Z9 754 aa8.55□□□□□ -1.04
SMARCC1-202ENST00000425518 STAG1Q8WVM7 1258 aa8.55□□□□□ -1.04
SMARCC1-202ENST00000425518 RNF41Q9H4P4 317 aaPredicted RBP8.55□□□□□ -1.04
SMARCC1-202ENST00000425518 MAPK8IP1Q9UQF2 711 aa8.55□□□□□ -1.04
SMARCC1-202ENST00000425518 MROH5Q6ZUA9 1318 aa8.55□□□□□ -1.04
SMARCC1-202ENST00000425518 RHOXF2BP0C7M4 288 aa8.55□□□□□ -1.04
SMARCC1-202ENST00000425518 FGFR2P21802 821 aa8.55□□□□□ -1.04
SMARCC1-202ENST00000425518 ELOA2Q8IYF1 753 aaPredicted RBP8.55□□□□□ -1.04
SMARCC1-202ENST00000425518 ACRBPQ8NEB7 543 aa8.55□□□□□ -1.04
SMARCC1-202ENST00000425518 CDC5LQ99459 802 aaKnown RBP8.55□□□□□ -1.04
SMARCC1-202ENST00000425518 RHOXF2Q9BQY4 288 aa8.55□□□□□ -1.04
SMARCC1-202ENST00000425518 CTNND2Q9UQB3 1225 aa8.55□□□□□ -1.04
SMARCC1-202ENST00000425518 WNT7AO00755 349 aa8.54□□□□□ -1.04
SMARCC1-202ENST00000425518 PLEKHA8P1O95397 391 aa8.54□□□□□ -1.04
SMARCC1-202ENST00000425518 KRT2P35908 639 aa8.54□□□□□ -1.04
SMARCC1-202ENST00000425518 GPS2Q13227 327 aa8.54□□□□□ -1.04
SMARCC1-202ENST00000425518 RRAGBQ5VZM2 374 aa8.54□□□□□ -1.04
SMARCC1-202ENST00000425518 ESR2Q92731 530 aa8.54□□□□□ -1.04
SMARCC1-202ENST00000425518 SLC4A9Q96Q91 983 aa8.54□□□□□ -1.04
SMARCC1-202ENST00000425518 PANX2Q96RD6 677 aa8.54□□□□□ -1.04
SMARCC1-202ENST00000425518 ATP8B1O43520 1251 aa8.54□□□□□ -1.04
SMARCC1-202ENST00000425518 ABL1P00519 1130 aa8.54□□□□□ -1.04
SMARCC1-202ENST00000425518 CYP19A1P11511 503 aaPredicted RBP8.54□□□□□ -1.04
SMARCC1-202ENST00000425518 GNAT2P19087 354 aa8.54□□□□□ -1.04
SMARCC1-202ENST00000425518 FXR1P51114 621 aaKnown RBP eCLIP8.54□□□□□ -1.043e-7■■□□□ 12.5
SMARCC1-202ENST00000425518 BRINP3Q76B58 766 aa8.54□□□□□ -1.04
SMARCC1-202ENST00000425518 SRGAP1Q7Z6B7 1085 aa8.54□□□□□ -1.04
SMARCC1-202ENST00000425518 NUP88Q99567 741 aaPredicted RBP8.54□□□□□ -1.04
SMARCC1-202ENST00000425518 FUT8Q9BYC5 575 aa8.54□□□□□ -1.04
SMARCC1-202ENST00000425518 ADD3Q9UEY8 706 aaKnown RBP8.54□□□□□ -1.04
SMARCC1-202ENST00000425518 KCPQ6ZWJ8 1503 aa8.54□□□□□ -1.04
SMARCC1-202ENST00000425518 LMAN1P49257 510 aa8.54□□□□□ -1.04
SMARCC1-202ENST00000425518 IFIT1BQ5T764 474 aaKnown RBP8.54□□□□□ -1.04
SMARCC1-202ENST00000425518 JAKMIP3Q5VZ66 844 aa8.54□□□□□ -1.04
SMARCC1-202ENST00000425518 SLC35F6Q8N357 371 aa8.54□□□□□ -1.04
SMARCC1-202ENST00000425518 SHISA4Q96DD7 197 aa8.54□□□□□ -1.04
SMARCC1-202ENST00000425518 AATFQ9NY61 560 aaKnown RBP eCLIP8.54□□□□□ -1.04
SMARCC1-202ENST00000425518 TAB2Q9NYJ8 693 aa8.54□□□□□ -1.04
SMARCC1-202ENST00000425518 CDC23Q9UJX2 597 aa8.54□□□□□ -1.04
SMARCC1-202ENST00000425518 CTAGE9A4FU28 777 aa8.53□□□□□ -1.04
SMARCC1-202ENST00000425518 PTGDRQ13258 359 aa8.53□□□□□ -1.04
SMARCC1-202ENST00000425518 SUSD4Q5VX71 490 aa8.53□□□□□ -1.04
SMARCC1-202ENST00000425518 WWC2Q6AWC2 1192 aa8.53□□□□□ -1.04
SMARCC1-202ENST00000425518 APTXQ7Z2E3 356 aaKnown RBP8.53□□□□□ -1.04
SMARCC1-202ENST00000425518 CATIPQ7Z7H3 387 aa8.53□□□□□ -1.04
SMARCC1-202ENST00000425518 SUGCTQ9HAC7 445 aa8.53□□□□□ -1.04
SMARCC1-202ENST00000425518 BRMS1Q9HCU9 246 aa8.53□□□□□ -1.04
SMARCC1-202ENST00000425518 PPP1R3GB7ZBB8 358 aa8.53□□□□□ -1.04
SMARCC1-202ENST00000425518 MFAP3LO75121 409 aa8.53□□□□□ -1.04
SMARCC1-202ENST00000425518 IGHMBP2P38935 993 aaKnown RBP8.53□□□□□ -1.04
SMARCC1-202ENST00000425518 FAM193AP78312 1265 aa8.53□□□□□ -1.04
SMARCC1-202ENST00000425518 MAPK8IP2Q13387 824 aaPredicted RBP8.53□□□□□ -1.04
SMARCC1-202ENST00000425518 CUL4BQ13620 913 aa8.53□□□□□ -1.04
SMARCC1-202ENST00000425518 ADGRA1Q86SQ6 560 aa8.53□□□□□ -1.04
SMARCC1-202ENST00000425518 SPATA20Q8TB22 786 aa8.53□□□□□ -1.04
SMARCC1-202ENST00000425518 CTAGE1Q96RT6 745 aa8.53□□□□□ -1.04
SMARCC1-202ENST00000425518 SLF1Q9BQI6 1058 aa8.53□□□□□ -1.04
SMARCC1-202ENST00000425518 RNF26Q9BY78 433 aaPredicted RBP8.53□□□□□ -1.04
SMARCC1-202ENST00000425518 PODXL2Q9NZ53 605 aa8.53□□□□□ -1.04
SMARCC1-202ENST00000425518 MAGEB6P1A0A0J9YX57 407 aa8.53□□□□□ -1.04
SMARCC1-202ENST00000425518 MCM7P33993 719 aa8.53□□□□□ -1.04
SMARCC1-202ENST00000425518 DYNLL1P63167 89 aaKnown RBP8.53□□□□□ -1.04
SMARCC1-202ENST00000425518 DPYDQ12882 1025 aa8.53□□□□□ -1.04
SMARCC1-202ENST00000425518 PKN1Q16512 942 aa8.53□□□□□ -1.04
SMARCC1-202ENST00000425518 TTC38Q5R3I4 469 aa8.53□□□□□ -1.04
SMARCC1-202ENST00000425518 CEP112Q8N8E3 955 aa8.53□□□□□ -1.04
SMARCC1-202ENST00000425518 ENAHQ8N8S7 591 aaPredicted RBP8.53□□□□□ -1.04
SMARCC1-202ENST00000425518 PDE11AQ9HCR9 933 aa8.53□□□□□ -1.04
SMARCC1-202ENST00000425518 SPEF2Q9C093 1822 aa8.53□□□□□ -1.04
SMARCC1-202ENST00000425518 ATRNO75882 1429 aa8.52□□□□□ -1.04
SMARCC1-202ENST00000425518 WTIPA6NIX2 430 aaPredicted RBP8.52□□□□□ -1.04
SMARCC1-202ENST00000425518 GYPCP04921 128 aa8.52□□□□□ -1.04
SMARCC1-202ENST00000425518 IRX5P78411 483 aaPredicted RBP8.52□□□□□ -1.04
SMARCC1-202ENST00000425518 KRT31Q15323 416 aa8.52□□□□□ -1.04
SMARCC1-202ENST00000425518 PIK3AP1Q6ZUJ8 805 aa8.52□□□□□ -1.04
SMARCC1-202ENST00000425518 CNGA4Q8IV77 575 aa8.52□□□□□ -1.04
SMARCC1-202ENST00000425518 ZFP91Q96JP5 570 aaPredicted RBP8.52□□□□□ -1.04
SMARCC1-202ENST00000425518 GSDMAQ96QA5 445 aa8.52□□□□□ -1.04
SMARCC1-202ENST00000425518 ZSCAN10Q96SZ4 725 aaPredicted RBP8.52□□□□□ -1.04
SMARCC1-202ENST00000425518 RNF216Q9NWF9 866 aaPredicted RBP8.52□□□□□ -1.04
SMARCC1-202ENST00000425518 CCDC151A5D8V7 595 aa8.52□□□□□ -1.05
SMARCC1-202ENST00000425518 H3BQF6 201 aa8.52□□□□□ -1.05
SMARCC1-202ENST00000425518 RNF225M0QZC1 329 aaPredicted RBP8.52□□□□□ -1.05
SMARCC1-202ENST00000425518 GYG1P46976 350 aa8.52□□□□□ -1.05
SMARCC1-202ENST00000425518 NLRP5P59047 1200 aa8.52□□□□□ -1.05
SMARCC1-202ENST00000425518 BRD3Q15059 726 aa8.52□□□□□ -1.05
SMARCC1-202ENST00000425518 SLC4A8Q2Y0W8 1093 aa8.52□□□□□ -1.05
SMARCC1-202ENST00000425518 TXLNBQ8N3L3 684 aa8.52□□□□□ -1.05
SMARCC1-202ENST00000425518 RASSF8Q8NHQ8 419 aa8.52□□□□□ -1.05
SMARCC1-202ENST00000425518 PNKPQ96T60 521 aa8.52□□□□□ -1.05
SMARCC1-202ENST00000425518 NAA15Q9BXJ9 866 aaKnown RBP8.52□□□□□ -1.05
SMARCC1-202ENST00000425518 VPS18Q9P253 973 aa8.52□□□□□ -1.05
SMARCC1-202ENST00000425518 ADAM21Q9UKJ8 722 aa8.52□□□□□ -1.05
SMARCC1-202ENST00000425518 TJP1Q07157 1748 aa8.52□□□□□ -1.05
SMARCC1-202ENST00000425518 SOS2Q07890 1332 aaPredicted RBP8.52□□□□□ -1.05
SMARCC1-202ENST00000425518 PHACTR2O75167 634 aa8.52□□□□□ -1.05
SMARCC1-202ENST00000425518 KRT9P35527 623 aa8.52□□□□□ -1.05
SMARCC1-202ENST00000425518 IQCA1Q86XH1 822 aa8.52□□□□□ -1.05
SMARCC1-202ENST00000425518 IQUBQ8NA54 791 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms