RNA–Protein interactions for RNA: ENST00000423998.1

GTF3C2-204, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 828 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-204ENST00000423998 CDK5RAP2Q96SN8 1893 aa16.33■□□□□ 0.2
GTF3C2-204ENST00000423998 CYP2D7A0A087X1C5 515 aa16.32■□□□□ 0.2
GTF3C2-204ENST00000423998 EPB41L2O43491 1005 aaKnown RBP16.32■□□□□ 0.2
GTF3C2-204ENST00000423998 FGRP09769 529 aa16.32■□□□□ 0.2
GTF3C2-204ENST00000423998 TAF1CQ15572 869 aaPredicted RBP16.32■□□□□ 0.2
GTF3C2-204ENST00000423998 IQCA1Q86XH1 822 aa16.32■□□□□ 0.2
GTF3C2-204ENST00000423998 NEDD1Q8NHV4 660 aa16.32■□□□□ 0.2
GTF3C2-204ENST00000423998 BRI3BPQ8WY22 251 aa16.32■□□□□ 0.2
GTF3C2-204ENST00000423998 ESYT1Q9BSJ8 1104 aa16.32■□□□□ 0.2
GTF3C2-204ENST00000423998 PRDM10Q9NQV6 1147 aa16.32■□□□□ 0.2
GTF3C2-204ENST00000423998 NYAP2Q9P242 653 aa16.32■□□□□ 0.2
GTF3C2-204ENST00000423998 PDHXO00330 501 aa16.31■□□□□ 0.2
GTF3C2-204ENST00000423998 RANBP6O60518 1105 aaKnown RBP16.31■□□□□ 0.2
GTF3C2-204ENST00000423998 TTLL1O95922 423 aa16.31■□□□□ 0.2
GTF3C2-204ENST00000423998 RASA1P20936 1047 aa16.31■□□□□ 0.2
GTF3C2-204ENST00000423998 TFAP4Q01664 338 aa16.31■□□□□ 0.2
GTF3C2-204ENST00000423998 MTMR2Q13614 643 aa16.31■□□□□ 0.2
GTF3C2-204ENST00000423998 KIF22Q14807 665 aa16.31■□□□□ 0.2
GTF3C2-204ENST00000423998 SEPT2Q15019 361 aa16.31■□□□□ 0.2
GTF3C2-204ENST00000423998 SMCR8Q8TEV9 937 aaPredicted RBP16.31■□□□□ 0.2
GTF3C2-204ENST00000423998 STAG1Q8WVM7 1258 aa16.31■□□□□ 0.2
GTF3C2-204ENST00000423998 MAP4K1Q92918 833 aa16.31■□□□□ 0.2
GTF3C2-204ENST00000423998 TTC14Q96N46 770 aa16.31■□□□□ 0.2
GTF3C2-204ENST00000423998 ZIC5Q96T25 663 aa16.31■□□□□ 0.2
GTF3C2-204ENST00000423998 THSD7BQ9C0I4 1608 aa16.3■□□□□ 0.2
GTF3C2-204ENST00000423998 BTBD19C9JJ37 291 aa16.3■□□□□ 0.2
GTF3C2-204ENST00000423998 AKR1B1P15121 316 aa16.3■□□□□ 0.2
GTF3C2-204ENST00000423998 HOXA7P31268 230 aaPredicted RBP16.3■□□□□ 0.2
GTF3C2-204ENST00000423998 GCLCP48506 637 aaPredicted RBP16.3■□□□□ 0.2
GTF3C2-204ENST00000423998 HMGCS2P54868 508 aa16.3■□□□□ 0.2
GTF3C2-204ENST00000423998 IRX3P78415 501 aaPredicted RBP16.3■□□□□ 0.2
GTF3C2-204ENST00000423998 RRP1BQ14684 758 aaKnown RBP16.3■□□□□ 0.2
GTF3C2-204ENST00000423998 SLC44A5Q8NCS7 719 aa16.3■□□□□ 0.2
GTF3C2-204ENST00000423998 C12orf42Q96LP6 360 aa16.3■□□□□ 0.2
GTF3C2-204ENST00000423998 ANO2Q9NQ90 1003 aa16.3■□□□□ 0.2
GTF3C2-204ENST00000423998 HOXC10Q9NYD6 342 aa16.3■□□□□ 0.2
GTF3C2-204ENST00000423998 TMX2Q9Y320 296 aa16.3■□□□□ 0.2
GTF3C2-204ENST00000423998 DOCK1Q14185 1865 aa16.29■□□□□ 0.2
GTF3C2-204ENST00000423998 USP17L15C9J2P7 530 aa16.29■□□□□ 0.2
GTF3C2-204ENST00000423998 USP17L13C9JLJ4 530 aa16.29■□□□□ 0.2
GTF3C2-204ENST00000423998 USP17L11C9JVI0 530 aa16.29■□□□□ 0.2
GTF3C2-204ENST00000423998 USP17L18D6R9N7 530 aa16.29■□□□□ 0.2
GTF3C2-204ENST00000423998 USP17L22D6RA61 530 aa16.29■□□□□ 0.2
GTF3C2-204ENST00000423998 USP17L17D6RBQ6 530 aa16.29■□□□□ 0.2
GTF3C2-204ENST00000423998 USP17L19D6RCP7 530 aa16.29■□□□□ 0.2
GTF3C2-204ENST00000423998 USP17L20D6RJB6 530 aa16.29■□□□□ 0.2
GTF3C2-204ENST00000423998 TLR2O60603 784 aa16.29■□□□□ 0.2
GTF3C2-204ENST00000423998 ZKSCAN1P17029 563 aaPredicted RBP16.29■□□□□ 0.2
GTF3C2-204ENST00000423998 ATP2B2Q01814 1243 aa16.29■□□□□ 0.2
GTF3C2-204ENST00000423998 USP17L24Q0WX57 530 aa16.29■□□□□ 0.2
GTF3C2-204ENST00000423998 SART3Q15020 963 aaKnown RBP16.29■□□□□ 0.2
GTF3C2-204ENST00000423998 RALYLQ86SE5 291 aaKnown RBP16.29■□□□□ 0.2
GTF3C2-204ENST00000423998 STK11IPQ8N1F8 1099 aa16.29■□□□□ 0.2
GTF3C2-204ENST00000423998 MKL1Q969V6 931 aa16.29■□□□□ 0.2
GTF3C2-204ENST00000423998 PTPN18Q99952 460 aa16.29■□□□□ 0.2
GTF3C2-204ENST00000423998 TCP11L1Q9NUJ3 509 aa16.29■□□□□ 0.2
GTF3C2-204ENST00000423998 IGF2BP3O00425 579 aaKnown RBP eCLIP16.28■□□□□ 0.2
GTF3C2-204ENST00000423998 FOXP2O15409 715 aa16.28■□□□□ 0.2
GTF3C2-204ENST00000423998 PRDM1O75626 825 aa16.28■□□□□ 0.2
GTF3C2-204ENST00000423998 GNRH1P01148 92 aa16.28■□□□□ 0.2
GTF3C2-204ENST00000423998 SLURP2P0DP57 97 aa16.28■□□□□ 0.2
GTF3C2-204ENST00000423998 CTDSPL2Q05D32 466 aa16.28■□□□□ 0.2
GTF3C2-204ENST00000423998 RRP12Q5JTH9 1297 aaKnown RBP16.28■□□□□ 0.2
GTF3C2-204ENST00000423998 ERO1AQ96HE7 468 aa16.28■□□□□ 0.2
GTF3C2-204ENST00000423998 MTMR4Q9NYA4 1195 aa16.28■□□□□ 0.2
GTF3C2-204ENST00000423998 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.28■□□□□ 0.2
GTF3C2-204ENST00000423998 DDX60LQ5H9U9 1706 aaKnown RBP16.28■□□□□ 0.2
GTF3C2-204ENST00000423998 BAZ2AQ9UIF9 1905 aaKnown RBP16.27■□□□□ 0.2
GTF3C2-204ENST00000423998 ERICH2A1L162 156 aa16.27■□□□□ 0.2
GTF3C2-204ENST00000423998 GPR25O00155 361 aa16.27■□□□□ 0.2
GTF3C2-204ENST00000423998 FOXN1O15353 648 aa16.27■□□□□ 0.2
GTF3C2-204ENST00000423998 FKTNO75072 461 aa16.27■□□□□ 0.2
GTF3C2-204ENST00000423998 EEF2P13639 858 aaKnown RBP16.27■□□□□ 0.2
GTF3C2-204ENST00000423998 HAND2P61296 217 aa16.27■□□□□ 0.2
GTF3C2-204ENST00000423998 KRT32Q14532 448 aa16.27■□□□□ 0.2
GTF3C2-204ENST00000423998 FAM43AQ8N2R8 423 aa16.27■□□□□ 0.2
GTF3C2-204ENST00000423998 VCPKMTQ9H867 229 aa16.27■□□□□ 0.2
GTF3C2-204ENST00000423998 CLIP2Q9UDT6 1046 aa16.27■□□□□ 0.2
GTF3C2-204ENST00000423998 STX8Q9UNK0 236 aa16.27■□□□□ 0.2
GTF3C2-204ENST00000423998 OTOFQ9HC10 1997 aa16.27■□□□□ 0.19
GTF3C2-204ENST00000423998 PLIN4Q96Q06 1357 aa16.26■□□□□ 0.19
GTF3C2-204ENST00000423998 WDR46O15213 610 aaKnown RBP16.26■□□□□ 0.19
GTF3C2-204ENST00000423998 TBC1D8O95759 1140 aa16.26■□□□□ 0.19
GTF3C2-204ENST00000423998 MCCP23508 829 aa16.26■□□□□ 0.19
GTF3C2-204ENST00000423998 LBX1P52954 281 aa16.26■□□□□ 0.19
GTF3C2-204ENST00000423998 SP3Q02447 781 aa16.26■□□□□ 0.19
GTF3C2-204ENST00000423998 CRHR2Q13324 411 aa16.26■□□□□ 0.19
GTF3C2-204ENST00000423998 GPAT2Q6NUI2 795 aa16.26■□□□□ 0.19
GTF3C2-204ENST00000423998 DGKHQ86XP1 1220 aa16.26■□□□□ 0.19
GTF3C2-204ENST00000423998 CCAR1Q8IX12 1150 aaKnown RBP16.26■□□□□ 0.19
GTF3C2-204ENST00000423998 NCOA7Q8NI08 942 aa16.26■□□□□ 0.19
GTF3C2-204ENST00000423998 UBAC1Q9BSL1 405 aa16.26■□□□□ 0.19
GTF3C2-204ENST00000423998 FDX1P10109 184 aa16.25■□□□□ 0.19
GTF3C2-204ENST00000423998 HSPA8P11142 646 aaKnown RBP16.25■□□□□ 0.19
GTF3C2-204ENST00000423998 HOXD10P28358 340 aa16.25■□□□□ 0.19
GTF3C2-204ENST00000423998 GUCY1A2P33402 732 aa16.25■□□□□ 0.19
GTF3C2-204ENST00000423998 COG2Q14746 738 aa16.25■□□□□ 0.19
GTF3C2-204ENST00000423998 PKN2Q16513 984 aaKnown RBP16.25■□□□□ 0.19
GTF3C2-204ENST00000423998 RCSD1Q6JBY9 416 aa16.25■□□□□ 0.19
GTF3C2-204ENST00000423998 TMTC2Q8N394 836 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms