RNA–Protein interactions for RNA: ENST00000422863.1

HLA-DQA1-204, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-204ENST00000422863 GBF1Q92538 1859 aa9.37□□□□□ -0.91
HLA-DQA1-204ENST00000422863 TMEM265A0A087WTH1 108 aa9.37□□□□□ -0.91
HLA-DQA1-204ENST00000422863 ENTPD3O75355 529 aa9.37□□□□□ -0.91
HLA-DQA1-204ENST00000422863 PPP1R37O75864 691 aa9.37□□□□□ -0.91
HLA-DQA1-204ENST00000422863 ALDH1L1O75891 902 aa9.37□□□□□ -0.91
HLA-DQA1-204ENST00000422863 SLC5A1P13866 664 aa9.37□□□□□ -0.91
HLA-DQA1-204ENST00000422863 ZKSCAN1P17029 563 aaPredicted RBP9.37□□□□□ -0.91
HLA-DQA1-204ENST00000422863 CNGA1P29973 690 aa9.37□□□□□ -0.91
HLA-DQA1-204ENST00000422863 PROCA1Q8NCQ7 364 aaPredicted RBP9.37□□□□□ -0.91
HLA-DQA1-204ENST00000422863 ZNF280CQ8ND82 737 aa9.37□□□□□ -0.91
HLA-DQA1-204ENST00000422863 PPM1EQ8WY54 764 aa9.37□□□□□ -0.91
HLA-DQA1-204ENST00000422863 BADQ92934 168 aa9.37□□□□□ -0.91
HLA-DQA1-204ENST00000422863 IDI2Q9BXS1 227 aa9.37□□□□□ -0.91
HLA-DQA1-204ENST00000422863 TXNRD2Q9NNW7 524 aa9.37□□□□□ -0.91
HLA-DQA1-204ENST00000422863 PRDM5Q9NQX1 630 aaPredicted RBP9.37□□□□□ -0.91
HLA-DQA1-204ENST00000422863 PRKAG2Q9UGJ0 569 aa9.37□□□□□ -0.91
HLA-DQA1-204ENST00000422863 ATP11BQ9Y2G3 1177 aa9.37□□□□□ -0.91
HLA-DQA1-204ENST00000422863 SIPA1L1O43166 1804 aa9.37□□□□□ -0.91
HLA-DQA1-204ENST00000422863 RTP1P59025 263 aa9.36□□□□□ -0.91
HLA-DQA1-204ENST00000422863 IRX3P78415 501 aaPredicted RBP9.36□□□□□ -0.91
HLA-DQA1-204ENST00000422863 PABPC4Q13310 644 aaKnown RBP eCLIP9.36□□□□□ -0.91
HLA-DQA1-204ENST00000422863 ANO1Q5XXA6 986 aa9.36□□□□□ -0.91
HLA-DQA1-204ENST00000422863 NYAP1Q6ZVC0 841 aa9.36□□□□□ -0.91
HLA-DQA1-204ENST00000422863 ANKK1Q8NFD2 765 aa9.36□□□□□ -0.91
HLA-DQA1-204ENST00000422863 LPIN2Q92539 896 aa9.36□□□□□ -0.91
HLA-DQA1-204ENST00000422863 PAGR1Q9BTK6 254 aa9.36□□□□□ -0.91
HLA-DQA1-204ENST00000422863 PORCNQ9H237 461 aa9.36□□□□□ -0.91
HLA-DQA1-204ENST00000422863 FLRT1Q9NZU1 646 aa9.36□□□□□ -0.91
HLA-DQA1-204ENST00000422863 MORF4L1Q9UBU8 362 aa9.36□□□□□ -0.91
HLA-DQA1-204ENST00000422863 USP17L5A8MUK1 530 aa9.35□□□□□ -0.91
HLA-DQA1-204ENST00000422863 BTDP43251 543 aa9.35□□□□□ -0.91
HLA-DQA1-204ENST00000422863 PHKA1P46020 1223 aa9.35□□□□□ -0.91
HLA-DQA1-204ENST00000422863 FOSBP53539 338 aa9.35□□□□□ -0.91
HLA-DQA1-204ENST00000422863 PDE3AQ14432 1141 aa9.35□□□□□ -0.91
HLA-DQA1-204ENST00000422863 GRIN2CQ14957 1233 aa9.35□□□□□ -0.91
HLA-DQA1-204ENST00000422863 RABL6Q3YEC7 729 aaPredicted RBP9.35□□□□□ -0.91
HLA-DQA1-204ENST00000422863 CCDC184Q52MB2 194 aa9.35□□□□□ -0.91
HLA-DQA1-204ENST00000422863 TJAP1Q5JTD0 557 aa9.35□□□□□ -0.91
HLA-DQA1-204ENST00000422863 GJC2Q5T442 439 aaPredicted RBP9.35□□□□□ -0.91
HLA-DQA1-204ENST00000422863 SH3RF1Q7Z6J0 888 aa9.35□□□□□ -0.91
HLA-DQA1-204ENST00000422863 CCAR1Q8IX12 1150 aaKnown RBP9.35□□□□□ -0.91
HLA-DQA1-204ENST00000422863 GPRC5AQ8NFJ5 357 aa9.35□□□□□ -0.91
HLA-DQA1-204ENST00000422863 USP6NLQ92738 828 aa9.35□□□□□ -0.91
HLA-DQA1-204ENST00000422863 SIL1Q9H173 461 aa9.35□□□□□ -0.91
HLA-DQA1-204ENST00000422863 CWC22Q9HCG8 908 aaKnown RBP9.35□□□□□ -0.91
HLA-DQA1-204ENST00000422863 GPHNQ9NQX3 736 aaPredicted RBP9.35□□□□□ -0.91
HLA-DQA1-204ENST00000422863 RBPJLQ9UBG7 517 aa9.35□□□□□ -0.91
HLA-DQA1-204ENST00000422863 ABCF2Q9UG63 623 aa9.35□□□□□ -0.91
HLA-DQA1-204ENST00000422863 EYA2O00167 538 aa9.34□□□□□ -0.91
HLA-DQA1-204ENST00000422863 STK25O00506 426 aa9.34□□□□□ -0.91
HLA-DQA1-204ENST00000422863 XRCC5P13010 732 aaKnown RBP9.34□□□□□ -0.91
HLA-DQA1-204ENST00000422863 CAP2P40123 477 aa9.34□□□□□ -0.91
HLA-DQA1-204ENST00000422863 RGS2P41220 211 aa9.34□□□□□ -0.91
HLA-DQA1-204ENST00000422863 HERVK_113P62684 666 aa9.34□□□□□ -0.91
HLA-DQA1-204ENST00000422863 ERVK-9P63128 1117 aa9.34□□□□□ -0.91
HLA-DQA1-204ENST00000422863 ERVK-24P63145 666 aa9.34□□□□□ -0.91
HLA-DQA1-204ENST00000422863 DSG2Q14126 1118 aa9.34□□□□□ -0.91
HLA-DQA1-204ENST00000422863 CCDC27Q2M243 656 aa9.34□□□□□ -0.91
HLA-DQA1-204ENST00000422863 SHROOM1Q2M3G4 852 aaPredicted RBP9.34□□□□□ -0.91
HLA-DQA1-204ENST00000422863 MORN1Q5T089 497 aa9.34□□□□□ -0.91
HLA-DQA1-204ENST00000422863 GPR142Q7Z601 462 aa9.34□□□□□ -0.91
HLA-DQA1-204ENST00000422863 FAM122AQ96E09 287 aa9.34□□□□□ -0.91
HLA-DQA1-204ENST00000422863 OSBPL5Q9H0X9 879 aaPredicted RBP9.34□□□□□ -0.91
HLA-DQA1-204ENST00000422863 PRKRIP1Q9H875 184 aaPredicted RBP9.34□□□□□ -0.91
HLA-DQA1-204ENST00000422863 GNL3LQ9NVN8 582 aaKnown RBP9.34□□□□□ -0.91
HLA-DQA1-204ENST00000422863 MYH1P12882 1939 aa9.34□□□□□ -0.91
HLA-DQA1-204ENST00000422863 UTYO14607 1347 aa9.33□□□□□ -0.92
HLA-DQA1-204ENST00000422863 GAKO14976 1311 aa9.33□□□□□ -0.92
HLA-DQA1-204ENST00000422863 KIF16BQ96L93 1317 aa9.33□□□□□ -0.92
HLA-DQA1-204ENST00000422863 ADORA1P30542 326 aa9.33□□□□□ -0.92
HLA-DQA1-204ENST00000422863 PLA2G5P39877 138 aa9.33□□□□□ -0.92
HLA-DQA1-204ENST00000422863 RFX5P48382 616 aaPredicted RBP9.33□□□□□ -0.92
HLA-DQA1-204ENST00000422863 JAG1P78504 1218 aa9.33□□□□□ -0.92
HLA-DQA1-204ENST00000422863 SMAD3P84022 425 aaKnown RBP9.33□□□□□ -0.92
HLA-DQA1-204ENST00000422863 MTMR2Q13614 643 aa9.33□□□□□ -0.92
HLA-DQA1-204ENST00000422863 ATP2B3Q16720 1220 aa9.33□□□□□ -0.92
HLA-DQA1-204ENST00000422863 SH3D19Q5HYK7 790 aa9.33□□□□□ -0.92
HLA-DQA1-204ENST00000422863 WDR78Q5VTH9 848 aa9.33□□□□□ -0.92
HLA-DQA1-204ENST00000422863 SLC39A5Q6ZMH5 540 aa9.33□□□□□ -0.92
HLA-DQA1-204ENST00000422863 ATG9AQ7Z3C6 839 aa9.33□□□□□ -0.92
HLA-DQA1-204ENST00000422863 PLEKHH3Q7Z736 793 aa9.33□□□□□ -0.92
HLA-DQA1-204ENST00000422863 DZIP1Q86YF9 867 aaKnown RBP9.33□□□□□ -0.92
HLA-DQA1-204ENST00000422863 TRMT44Q8IYL2 757 aaKnown RBP9.33□□□□□ -0.92
HLA-DQA1-204ENST00000422863 OXER1Q8TDS5 423 aa9.33□□□□□ -0.92
HLA-DQA1-204ENST00000422863 SOCS4Q8WXH5 440 aa9.33□□□□□ -0.92
HLA-DQA1-204ENST00000422863 FERMT2Q96AC1 680 aa9.33□□□□□ -0.92
HLA-DQA1-204ENST00000422863 EDC3Q96F86 508 aaKnown RBP9.33□□□□□ -0.92
HLA-DQA1-204ENST00000422863 TMOD4Q9NZQ9 345 aa9.33□□□□□ -0.92
HLA-DQA1-204ENST00000422863 DENND2AQ9ULE3 1009 aa9.33□□□□□ -0.92
HLA-DQA1-204ENST00000422863 RFX7Q2KHR2 1363 aa9.33□□□□□ -0.92
HLA-DQA1-204ENST00000422863 IL16Q14005 1332 aa9.32□□□□□ -0.92
HLA-DQA1-204ENST00000422863 TRIM43BA6NCK2 446 aa9.32□□□□□ -0.92
HLA-DQA1-204ENST00000422863 MAPK4P31152 587 aa9.32□□□□□ -0.92
HLA-DQA1-204ENST00000422863 CYP2C19P33261 490 aa9.32□□□□□ -0.92
HLA-DQA1-204ENST00000422863 BACE1P56817 501 aa9.32□□□□□ -0.92
HLA-DQA1-204ENST00000422863 RHBDL3P58872 404 aa9.32□□□□□ -0.92
HLA-DQA1-204ENST00000422863 MAP2K5Q13163 448 aa9.32□□□□□ -0.92
HLA-DQA1-204ENST00000422863 TRIM60Q495X7 471 aa9.32□□□□□ -0.92
HLA-DQA1-204ENST00000422863 TRPV1Q8NER1 839 aa9.32□□□□□ -0.92
HLA-DQA1-204ENST00000422863 NPLOC4Q8TAT6 608 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms