RNA–Protein interactions for RNA: ENST00000422029.6

NDUFA3-208, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3

Gene NDUFA3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-208ENST00000422029 ZBTB40Q9NUA8 1239 aa13.76□□□□□ -0.21
NDUFA3-208ENST00000422029 RCAN3Q9UKA8 241 aa13.76□□□□□ -0.21
NDUFA3-208ENST00000422029 CEP290O15078 2479 aa13.76□□□□□ -0.21
NDUFA3-208ENST00000422029 MKI67P46013 3256 aaKnown RBP13.75□□□□□ -0.21
NDUFA3-208ENST00000422029 CNMDO75829 334 aa13.75□□□□□ -0.21
NDUFA3-208ENST00000422029 HMGCRP04035 888 aa13.75□□□□□ -0.21
NDUFA3-208ENST00000422029 GUCY1A2P33402 732 aa13.75□□□□□ -0.21
NDUFA3-208ENST00000422029 HSP90AB4PQ58FF6 505 aa13.75□□□□□ -0.21
NDUFA3-208ENST00000422029 STK11IPQ8N1F8 1099 aa13.75□□□□□ -0.21
NDUFA3-208ENST00000422029 KIF1BPQ96EK5 621 aa13.75□□□□□ -0.21
NDUFA3-208ENST00000422029 HMX1Q9NP08 348 aaPredicted RBP13.75□□□□□ -0.21
NDUFA3-208ENST00000422029 PLXNB2O15031 1838 aa13.74□□□□□ -0.21
NDUFA3-208ENST00000422029 TCRBV5S4A2TA0A5A2 114 aa13.74□□□□□ -0.21
NDUFA3-208ENST00000422029 PRKAR2AP13861 404 aaKnown RBP13.74□□□□□ -0.21
NDUFA3-208ENST00000422029 ERVK-9P63128 1117 aa13.74□□□□□ -0.21
NDUFA3-208ENST00000422029 ERVK-24P63145 666 aa13.74□□□□□ -0.21
NDUFA3-208ENST00000422029 KIAA1755Q5JYT7 1200 aa13.74□□□□□ -0.21
NDUFA3-208ENST00000422029 GPR142Q7Z601 462 aa13.74□□□□□ -0.21
NDUFA3-208ENST00000422029 RPAP2Q8IXW5 612 aaPredicted RBP13.74□□□□□ -0.21
NDUFA3-208ENST00000422029 C7orf61Q8IZ16 206 aa13.74□□□□□ -0.21
NDUFA3-208ENST00000422029 NUDT12Q9BQG2 462 aa13.74□□□□□ -0.21
NDUFA3-208ENST00000422029 CRNKL1Q9BZJ0 848 aaKnown RBP13.74□□□□□ -0.21
NDUFA3-208ENST00000422029 RPAP3Q9H6T3 665 aaPredicted RBP13.74□□□□□ -0.21
NDUFA3-208ENST00000422029 CABP5Q9NP86 173 aa13.74□□□□□ -0.21
NDUFA3-208ENST00000422029 STAP2Q9UGK3 403 aa13.74□□□□□ -0.21
NDUFA3-208ENST00000422029 ZMYND8Q9ULU4 1186 aaPredicted RBP13.74□□□□□ -0.21
NDUFA3-208ENST00000422029 DDX19BQ9UMR2 479 aa13.74□□□□□ -0.21
NDUFA3-208ENST00000422029 A0A1W2PRG0 241 aa13.73□□□□□ -0.21
NDUFA3-208ENST00000422029 USP17L15C9J2P7 530 aa13.73□□□□□ -0.21
NDUFA3-208ENST00000422029 USP17L13C9JLJ4 530 aa13.73□□□□□ -0.21
NDUFA3-208ENST00000422029 USP17L11C9JVI0 530 aa13.73□□□□□ -0.21
NDUFA3-208ENST00000422029 USP17L18D6R9N7 530 aa13.73□□□□□ -0.21
NDUFA3-208ENST00000422029 USP17L22D6RA61 530 aa13.73□□□□□ -0.21
NDUFA3-208ENST00000422029 USP17L17D6RBQ6 530 aa13.73□□□□□ -0.21
NDUFA3-208ENST00000422029 USP17L19D6RCP7 530 aa13.73□□□□□ -0.21
NDUFA3-208ENST00000422029 USP17L20D6RJB6 530 aa13.73□□□□□ -0.21
NDUFA3-208ENST00000422029 HMMRO75330 724 aa13.73□□□□□ -0.21
NDUFA3-208ENST00000422029 MBD4O95243 580 aa13.73□□□□□ -0.21
NDUFA3-208ENST00000422029 SYN1P17600 705 aa13.73□□□□□ -0.21
NDUFA3-208ENST00000422029 VCAM1P19320 739 aa13.73□□□□□ -0.21
NDUFA3-208ENST00000422029 CCND3P30281 292 aaPredicted RBP13.73□□□□□ -0.21
NDUFA3-208ENST00000422029 USP17L24Q0WX57 530 aa13.73□□□□□ -0.21
NDUFA3-208ENST00000422029 PDE3AQ14432 1141 aa13.73□□□□□ -0.21
NDUFA3-208ENST00000422029 TTF1Q15361 905 aaPredicted RBP13.73□□□□□ -0.21
NDUFA3-208ENST00000422029 PLEKHH3Q7Z736 793 aa13.73□□□□□ -0.21
NDUFA3-208ENST00000422029 CRISPLD2Q9H0B8 497 aa13.73□□□□□ -0.21
NDUFA3-208ENST00000422029 BTBD7Q9P203 1132 aa13.73□□□□□ -0.21
NDUFA3-208ENST00000422029 NR2E3Q9Y5X4 410 aa13.73□□□□□ -0.21
NDUFA3-208ENST00000422029 RPTORQ8N122 1335 aa13.72□□□□□ -0.21
NDUFA3-208ENST00000422029 TRIOBPQ9H2D6 2365 aa13.72□□□□□ -0.21
NDUFA3-208ENST00000422029 BRCA2P51587 3418 aa13.72□□□□□ -0.21
NDUFA3-208ENST00000422029 MS4A1P11836 297 aa13.72□□□□□ -0.21
NDUFA3-208ENST00000422029 ZKSCAN1P17029 563 aaPredicted RBP13.72□□□□□ -0.21
NDUFA3-208ENST00000422029 CACNB2Q08289 660 aaPredicted RBP13.72□□□□□ -0.21
NDUFA3-208ENST00000422029 TSHZ3Q63HK5 1081 aa13.72□□□□□ -0.21
NDUFA3-208ENST00000422029 CATSPERGQ6ZRH7 1159 aa13.72□□□□□ -0.21
NDUFA3-208ENST00000422029 NECAB2Q7Z6G3 386 aa13.72□□□□□ -0.21
NDUFA3-208ENST00000422029 SPICE1Q8N0Z3 855 aa13.72□□□□□ -0.21
NDUFA3-208ENST00000422029 EHD4Q9H223 541 aa13.72□□□□□ -0.21
NDUFA3-208ENST00000422029 DCP1AQ9NPI6 582 aaPredicted RBP13.72□□□□□ -0.21
NDUFA3-208ENST00000422029 PAG1Q9NWQ8 432 aa13.72□□□□□ -0.21
NDUFA3-208ENST00000422029 FLRT1Q9NZU1 646 aa13.72□□□□□ -0.21
NDUFA3-208ENST00000422029 RAB11FIP3O75154 756 aa13.71□□□□□ -0.21
NDUFA3-208ENST00000422029 AKR1B1P15121 316 aa13.71□□□□□ -0.21
NDUFA3-208ENST00000422029 MAPK4P31152 587 aa13.71□□□□□ -0.21
NDUFA3-208ENST00000422029 MNX1P50219 401 aaPredicted RBP13.71□□□□□ -0.21
NDUFA3-208ENST00000422029 ATP2B2Q01814 1243 aa13.71□□□□□ -0.21
NDUFA3-208ENST00000422029 GABPAQ06546 454 aa13.71□□□□□ -0.21
NDUFA3-208ENST00000422029 TANGO6Q9C0B7 1094 aa13.71□□□□□ -0.21
NDUFA3-208ENST00000422029 KIAA1683Q9H0B3 1180 aa13.71□□□□□ -0.21
NDUFA3-208ENST00000422029 GINM1Q9NU53 330 aa13.71□□□□□ -0.21
NDUFA3-208ENST00000422029 ADD2P35612 726 aa13.7□□□□□ -0.22
NDUFA3-208ENST00000422029 MORN1Q5T089 497 aa13.7□□□□□ -0.22
NDUFA3-208ENST00000422029 USP6NLQ92738 828 aa13.7□□□□□ -0.22
NDUFA3-208ENST00000422029 NAV1Q8NEY1 1877 aa13.7□□□□□ -0.22
NDUFA3-208ENST00000422029 SPDYE16A6NNV3 312 aaPredicted RBP13.69□□□□□ -0.22
NDUFA3-208ENST00000422029 USP17L12C9JPN9 530 aa13.69□□□□□ -0.22
NDUFA3-208ENST00000422029 USP17L21D6R901 530 aa13.69□□□□□ -0.22
NDUFA3-208ENST00000422029 RAD21O60216 631 aa13.69□□□□□ -0.22
NDUFA3-208ENST00000422029 ATP5JP18859 108 aa13.69□□□□□ -0.22
NDUFA3-208ENST00000422029 CNGA1P29973 690 aa13.69□□□□□ -0.22
NDUFA3-208ENST00000422029 CYP2C19P33261 490 aa13.69□□□□□ -0.22
NDUFA3-208ENST00000422029 RGS2P41220 211 aa13.69□□□□□ -0.22
NDUFA3-208ENST00000422029 USP14P54578 494 aa13.69□□□□□ -0.22
NDUFA3-208ENST00000422029 MAP2K5Q13163 448 aa13.69□□□□□ -0.22
NDUFA3-208ENST00000422029 PLS1Q14651 629 aa13.69□□□□□ -0.22
NDUFA3-208ENST00000422029 ANO1Q5XXA6 986 aa13.69□□□□□ -0.22
NDUFA3-208ENST00000422029 SIAH1Q8IUQ4 282 aa13.69□□□□□ -0.22
NDUFA3-208ENST00000422029 NPLOC4Q8TAT6 608 aa13.69□□□□□ -0.22
NDUFA3-208ENST00000422029 SOCS4Q8WXH5 440 aa13.69□□□□□ -0.22
NDUFA3-208ENST00000422029 C12orf42Q96LP6 360 aa13.69□□□□□ -0.22
NDUFA3-208ENST00000422029 HAUS7Q99871 368 aa13.69□□□□□ -0.22
NDUFA3-208ENST00000422029 NBPF3Q9H094 633 aa13.69□□□□□ -0.22
NDUFA3-208ENST00000422029 C11orf49Q9H6J7 331 aa13.69□□□□□ -0.22
NDUFA3-208ENST00000422029 RABGAP1Q9Y3P9 1069 aa13.69□□□□□ -0.22
NDUFA3-208ENST00000422029 SLC4A4Q9Y6R1 1079 aa13.69□□□□□ -0.22
NDUFA3-208ENST00000422029 SOX1O00570 391 aaPredicted RBP13.68□□□□□ -0.22
NDUFA3-208ENST00000422029 MYCNP04198 464 aaPredicted RBP13.68□□□□□ -0.22
NDUFA3-208ENST00000422029 MAP3K21Q5TCX8 1036 aa13.68□□□□□ -0.22
NDUFA3-208ENST00000422029 CERS3Q8IU89 383 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms