RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 CTSWP56202 376 aa7.95□□□□□ -1.14
SFXN1-202ENST00000421887 SPACA3Q8IXA5 215 aa7.95□□□□□ -1.14
SFXN1-202ENST00000421887 NSUN3Q9H649 340 aaKnown RBP7.95□□□□□ -1.14
SFXN1-202ENST00000421887 UGGT1Q9NYU2 1555 aa7.95□□□□□ -1.14
SFXN1-202ENST00000421887 ADGBQ8N7X0 1667 aa7.95□□□□□ -1.14
SFXN1-202ENST00000421887 STRCP1A6NGW2 1772 aa7.94□□□□□ -1.14
SFXN1-202ENST00000421887 KCNB2Q92953 911 aa7.94□□□□□ -1.14
SFXN1-202ENST00000421887 NPHS2Q9NP85 383 aa7.94□□□□□ -1.14
SFXN1-202ENST00000421887 ANO2Q9NQ90 1003 aa7.94□□□□□ -1.14
SFXN1-202ENST00000421887 MED14O60244 1454 aa7.94□□□□□ -1.14
SFXN1-202ENST00000421887 SYCP2Q9BX26 1530 aa7.93□□□□□ -1.14
SFXN1-202ENST00000421887 PLXNC1O60486 1568 aa7.93□□□□□ -1.14
SFXN1-202ENST00000421887 AMIGO3Q86WK7 504 aa7.93□□□□□ -1.14
SFXN1-202ENST00000421887 KCNK12Q9HB15 430 aa7.93□□□□□ -1.14
SFXN1-202ENST00000421887 ABL1P00519 1130 aa7.92□□□□□ -1.14
SFXN1-202ENST00000421887 HNRNPMP52272 730 aaKnown RBP eCLIP7.92□□□□□ -1.14
SFXN1-202ENST00000421887 FKBP4Q02790 459 aaKnown RBP eCLIP7.92□□□□□ -1.14
SFXN1-202ENST00000421887 PTPN12Q05209 780 aaKnown RBP7.92□□□□□ -1.14
SFXN1-202ENST00000421887 FAAP100Q0VG06 881 aa7.92□□□□□ -1.14
SFXN1-202ENST00000421887 KCNA10Q16322 511 aa7.92□□□□□ -1.14
SFXN1-202ENST00000421887 NKPD1Q17RQ9 610 aa7.92□□□□□ -1.14
SFXN1-202ENST00000421887 CARS2Q9HA77 564 aaKnown RBP7.92□□□□□ -1.14
SFXN1-202ENST00000421887 KRT82Q9NSB4 513 aa7.92□□□□□ -1.14
SFXN1-202ENST00000421887 NLRP1Q9C000 1473 aa7.92□□□□□ -1.14
SFXN1-202ENST00000421887 LRRIQ1Q96JM4 1722 aa7.92□□□□□ -1.14
SFXN1-202ENST00000421887 GNAT3A8MTJ3 354 aa7.91□□□□□ -1.14
SFXN1-202ENST00000421887 SF3B2Q13435 895 aaKnown RBP7.91□□□□□ -1.14
SFXN1-202ENST00000421887 MEX3CQ5U5Q3 659 aaKnown RBP7.91□□□□□ -1.14
SFXN1-202ENST00000421887 ZNF772Q68DY9 489 aaPredicted RBP7.91□□□□□ -1.14
SFXN1-202ENST00000421887 CIAPIN1Q6FI81 312 aa7.91□□□□□ -1.14
SFXN1-202ENST00000421887 ATG14Q6ZNE5 492 aa7.91□□□□□ -1.14
SFXN1-202ENST00000421887 FAM214BQ7L5A3 538 aa7.91□□□□□ -1.14
SFXN1-202ENST00000421887 KRTAP17-1Q9BYP8 105 aa7.91□□□□□ -1.14
SFXN1-202ENST00000421887 ABCB6Q9NP58 842 aa7.91□□□□□ -1.14
SFXN1-202ENST00000421887 FAM135BQ49AJ0 1406 aa7.91□□□□□ -1.14
SFXN1-202ENST00000421887 INO80Q9ULG1 1556 aaPredicted RBP7.91□□□□□ -1.14
SFXN1-202ENST00000421887 ROBO1Q9Y6N7 1651 aa7.9□□□□□ -1.14
SFXN1-202ENST00000421887 PZPP20742 1482 aa7.9□□□□□ -1.14
SFXN1-202ENST00000421887 PLEKHH2Q8IVE3 1493 aa7.9□□□□□ -1.14
SFXN1-202ENST00000421887 EEA1Q15075 1411 aa7.9□□□□□ -1.14
SFXN1-202ENST00000421887 PITPNM2Q9BZ72 1349 aa7.9□□□□□ -1.14
SFXN1-202ENST00000421887 WASHC2CQ9Y4E1 1318 aa7.9□□□□□ -1.14
SFXN1-202ENST00000421887 IGF2BP3O00425 579 aaKnown RBP eCLIP7.9□□□□□ -1.14
SFXN1-202ENST00000421887 SSFA2P28290 1259 aa7.9□□□□□ -1.14
SFXN1-202ENST00000421887 RPS26P11Q5JNZ5 115 aaPredicted RBP7.9□□□□□ -1.14
SFXN1-202ENST00000421887 RNF214Q8ND24 703 aa7.9□□□□□ -1.14
SFXN1-202ENST00000421887 XIRP1Q702N8 1843 aaKnown RBP7.89□□□□□ -1.15
SFXN1-202ENST00000421887 CCDC18Q5T9S5 1454 aa7.89□□□□□ -1.15
SFXN1-202ENST00000421887 MIA2Q96PC5 1412 aa7.89□□□□□ -1.15
SFXN1-202ENST00000421887 TCAF2A6NFQ2 919 aa7.89□□□□□ -1.15
SFXN1-202ENST00000421887 GADD45BO75293 160 aaPredicted RBP7.89□□□□□ -1.15
SFXN1-202ENST00000421887 NEFLP07196 543 aa7.89□□□□□ -1.15
SFXN1-202ENST00000421887 DCP1AQ9NPI6 582 aaPredicted RBP7.89□□□□□ -1.15
SFXN1-202ENST00000421887 PRDM10Q9NQV6 1147 aa7.89□□□□□ -1.15
SFXN1-202ENST00000421887 GPN3Q9UHW5 284 aaPredicted RBP7.89□□□□□ -1.15
SFXN1-202ENST00000421887 MTMR7Q9Y216 660 aa7.89□□□□□ -1.15
SFXN1-202ENST00000421887 PHLPP1O60346 1717 aa7.89□□□□□ -1.15
SFXN1-202ENST00000421887 KDM5DQ9BY66 1539 aa7.88□□□□□ -1.15
SFXN1-202ENST00000421887 TMEM238LA0A1B0GVL6 79 aa7.88□□□□□ -1.15
SFXN1-202ENST00000421887 KIF3BO15066 747 aa7.88□□□□□ -1.15
SFXN1-202ENST00000421887 CLCN7P51798 805 aa7.88□□□□□ -1.15
SFXN1-202ENST00000421887 ZNF211Q13398 564 aaPredicted RBP7.88□□□□□ -1.15
SFXN1-202ENST00000421887 ORC1Q13415 861 aa7.88□□□□□ -1.15
SFXN1-202ENST00000421887 CFDP1Q9UEE9 299 aaPredicted RBP7.88□□□□□ -1.15
SFXN1-202ENST00000421887 KIAA1107Q9UPP5 1409 aa7.87□□□□□ -1.15
SFXN1-202ENST00000421887 JCADQ9P266 1359 aa7.87□□□□□ -1.15
SFXN1-202ENST00000421887 ZC3H13Q5T200 1668 aaKnown RBP7.87□□□□□ -1.15
SFXN1-202ENST00000421887 CPNE3O75131 537 aaKnown RBP7.87□□□□□ -1.15
SFXN1-202ENST00000421887 ZC3H12AQ5D1E8 599 aaKnown RBP7.87□□□□□ -1.15
SFXN1-202ENST00000421887 EPB41L4BQ9H329 900 aa7.87□□□□□ -1.15
SFXN1-202ENST00000421887 ATP13A1Q9HD20 1204 aa7.87□□□□□ -1.15
SFXN1-202ENST00000421887 CD320Q9NPF0 282 aa7.87□□□□□ -1.15
SFXN1-202ENST00000421887 C19orf73Q9NVV2 129 aa7.87□□□□□ -1.15
SFXN1-202ENST00000421887 NUAK1O60285 661 aa7.86□□□□□ -1.15
SFXN1-202ENST00000421887 HOXA5P20719 270 aa7.86□□□□□ -1.15
SFXN1-202ENST00000421887 GDNFP39905 211 aa7.86□□□□□ -1.15
SFXN1-202ENST00000421887 ERVK-24P63145 666 aa7.86□□□□□ -1.15
SFXN1-202ENST00000421887 PPP2R3AQ06190 1150 aa7.86□□□□□ -1.15
SFXN1-202ENST00000421887 MAP1SQ66K74 1059 aaPredicted RBP7.86□□□□□ -1.15
SFXN1-202ENST00000421887 PICK1Q9NRD5 415 aa7.86□□□□□ -1.15
SFXN1-202ENST00000421887 BRPF3Q9ULD4 1205 aa7.86□□□□□ -1.15
SFXN1-202ENST00000421887 JAG2Q9Y219 1238 aa7.86□□□□□ -1.15
SFXN1-202ENST00000421887 CSADQ9Y600 493 aa7.86□□□□□ -1.15
SFXN1-202ENST00000421887 LRRC9Q6ZRR7 1453 aa7.86□□□□□ -1.15
SFXN1-202ENST00000421887 CFAP65Q6ZU64 1925 aaKnown RBP7.86□□□□□ -1.15
SFXN1-202ENST00000421887 ETV2O00321 342 aaPredicted RBP7.85□□□□□ -1.15
SFXN1-202ENST00000421887 PRPF40BQ6NWY9 871 aaKnown RBP7.85□□□□□ -1.15
SFXN1-202ENST00000421887 PDZD3Q86UT5 571 aa7.85□□□□□ -1.15
SFXN1-202ENST00000421887 KCNN1Q92952 543 aa7.85□□□□□ -1.15
SFXN1-202ENST00000421887 RELTQ969Z4 430 aa7.85□□□□□ -1.15
SFXN1-202ENST00000421887 ACSBG1Q96GR2 724 aa7.85□□□□□ -1.15
SFXN1-202ENST00000421887 C20orf173Q96LM9 149 aa7.85□□□□□ -1.15
SFXN1-202ENST00000421887 HSPA12BQ96MM6 686 aa7.85□□□□□ -1.15
SFXN1-202ENST00000421887 TMEM39AQ9NV64 488 aa7.85□□□□□ -1.15
SFXN1-202ENST00000421887 SMG5Q9UPR3 1016 aaKnown RBP7.85□□□□□ -1.15
SFXN1-202ENST00000421887 EID1Q9Y6B2 187 aa7.85□□□□□ -1.15
SFXN1-202ENST00000421887 ARHGAP35Q9NRY4 1499 aa7.85□□□□□ -1.15
SFXN1-202ENST00000421887 DHX29Q7Z478 1369 aaKnown RBP7.84□□□□□ -1.15
SFXN1-202ENST00000421887 SPATA31A6Q5VVP1 1343 aa7.84□□□□□ -1.15
SFXN1-202ENST00000421887 GPATCH8Q9UKJ3 1502 aaKnown RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms