RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 CDC45O75419 566 aa18.7■□□□□ 0.58
BRAT1-202ENST00000421712 GUCY1A2P33402 732 aa18.7■□□□□ 0.58
BRAT1-202ENST00000421712 RRP12Q5JTH9 1297 aaKnown RBP18.7■□□□□ 0.58
BRAT1-202ENST00000421712 ANKRD23Q86SG2 305 aa18.7■□□□□ 0.58
BRAT1-202ENST00000421712 ZFYVE28Q9HCC9 887 aa18.7■□□□□ 0.58
BRAT1-202ENST00000421712 INCENPQ9NQS7 918 aa18.7■□□□□ 0.58
BRAT1-202ENST00000421712 ANAPC4Q9UJX5 808 aa18.7■□□□□ 0.58
BRAT1-202ENST00000421712 LAMB1P07942 1786 aa18.7■□□□□ 0.58
BRAT1-202ENST00000421712 PHIPQ8WWQ0 1821 aa18.7■□□□□ 0.58
BRAT1-202ENST00000421712 RANBP6O60518 1105 aaKnown RBP18.69■□□□□ 0.58
BRAT1-202ENST00000421712 TSPY3P0CV98 308 aa18.69■□□□□ 0.58
BRAT1-202ENST00000421712 TSPY8P0CW00 308 aa18.69■□□□□ 0.58
BRAT1-202ENST00000421712 ICA1Q05084 483 aa18.69■□□□□ 0.58
BRAT1-202ENST00000421712 IMMTQ16891 758 aaKnown RBP18.69■□□□□ 0.58
BRAT1-202ENST00000421712 FAM47AQ5JRC9 791 aa18.69■□□□□ 0.58
BRAT1-202ENST00000421712 USP17L2Q6R6M4 530 aa18.69■□□□□ 0.58
BRAT1-202ENST00000421712 ACER1Q8TDN7 264 aa18.69■□□□□ 0.58
BRAT1-202ENST00000421712 KANSL2Q9H9L4 492 aa18.69■□□□□ 0.58
BRAT1-202ENST00000421712 ARHGEF10LQ9HCE6 1279 aa18.69■□□□□ 0.58
BRAT1-202ENST00000421712 ZMYM6O95789 1325 aa18.69■□□□□ 0.58
BRAT1-202ENST00000421712 TSPY2A6NKD2 308 aa18.68■□□□□ 0.58
BRAT1-202ENST00000421712 USP14P54578 494 aa18.68■□□□□ 0.58
BRAT1-202ENST00000421712 TFAP4Q01664 338 aa18.68■□□□□ 0.58
BRAT1-202ENST00000421712 PTH1RQ03431 593 aa18.68■□□□□ 0.58
BRAT1-202ENST00000421712 CRHR2Q13324 411 aa18.68■□□□□ 0.58
BRAT1-202ENST00000421712 DGKZQ13574 1117 aa18.68■□□□□ 0.58
BRAT1-202ENST00000421712 MOGSQ13724 837 aa18.68■□□□□ 0.58
BRAT1-202ENST00000421712 GPAT2Q6NUI2 795 aa18.68■□□□□ 0.58
BRAT1-202ENST00000421712 MFSD6Q6ZSS7 791 aa18.68■□□□□ 0.58
BRAT1-202ENST00000421712 CLEC10AQ8IUN9 316 aa18.68■□□□□ 0.58
BRAT1-202ENST00000421712 PROCA1Q8NCQ7 364 aaPredicted RBP18.68■□□□□ 0.58
BRAT1-202ENST00000421712 ESYT1Q9BSJ8 1104 aa18.68■□□□□ 0.58
BRAT1-202ENST00000421712 ZCCHC17Q9NP64 241 aaKnown RBP18.68■□□□□ 0.58
BRAT1-202ENST00000421712 RAD21O60216 631 aa18.67■□□□□ 0.58
BRAT1-202ENST00000421712 PABPC4Q13310 644 aaKnown RBP eCLIP18.67■□□□□ 0.58
BRAT1-202ENST00000421712 SH3D19Q5HYK7 790 aa18.67■□□□□ 0.58
BRAT1-202ENST00000421712 AKNAD1Q5T1N1 836 aa18.67■□□□□ 0.58
BRAT1-202ENST00000421712 R3HDMLQ9H3Y0 253 aa18.67■□□□□ 0.58
BRAT1-202ENST00000421712 RNF41Q9H4P4 317 aaPredicted RBP18.67■□□□□ 0.58
BRAT1-202ENST00000421712 AGTPBP1Q9UPW5 1226 aa18.67■□□□□ 0.58
BRAT1-202ENST00000421712 EEF2P13639 858 aaKnown RBP18.66■□□□□ 0.58
BRAT1-202ENST00000421712 OSBPP22059 807 aa18.66■□□□□ 0.58
BRAT1-202ENST00000421712 TREML2Q5T2D2 321 aa18.66■□□□□ 0.58
BRAT1-202ENST00000421712 PARK7Q99497 189 aaKnown RBP18.66■□□□□ 0.58
BRAT1-202ENST00000421712 KIAA1683Q9H0B3 1180 aa18.66■□□□□ 0.58
BRAT1-202ENST00000421712 SH2D4AQ9H788 454 aa18.66■□□□□ 0.58
BRAT1-202ENST00000421712 ANO2Q9NQ90 1003 aa18.66■□□□□ 0.58
BRAT1-202ENST00000421712 EMILIN3Q9NT22 766 aa18.66■□□□□ 0.58
BRAT1-202ENST00000421712 U3KPZ7 1027 aaPredicted RBP18.66■□□□□ 0.58
BRAT1-202ENST00000421712 A0A1W2PRG0 241 aa18.65■□□□□ 0.58
BRAT1-202ENST00000421712 GPR25O00155 361 aa18.65■□□□□ 0.58
BRAT1-202ENST00000421712 NEDD1Q8NHV4 660 aa18.65■□□□□ 0.58
BRAT1-202ENST00000421712 STAG1Q8WVM7 1258 aa18.65■□□□□ 0.58
BRAT1-202ENST00000421712 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.65■□□□□ 0.58
BRAT1-202ENST00000421712 CLIP2Q9UDT6 1046 aa18.65■□□□□ 0.58
BRAT1-202ENST00000421712 PNMA3Q9UL41 463 aa18.65■□□□□ 0.58
BRAT1-202ENST00000421712 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.65■□□□□ 0.58
BRAT1-202ENST00000421712 PTPRFP10586 1907 aa18.64■□□□□ 0.58
BRAT1-202ENST00000421712 ORC4O43929 436 aa18.64■□□□□ 0.57
BRAT1-202ENST00000421712 CYP2C8P10632 490 aa18.64■□□□□ 0.57
BRAT1-202ENST00000421712 PCP11498 1178 aaKnown RBP18.64■□□□□ 0.57
BRAT1-202ENST00000421712 IRX3P78415 501 aaPredicted RBP18.64■□□□□ 0.57
BRAT1-202ENST00000421712 TBC1D10CQ8IV04 446 aa18.64■□□□□ 0.57
BRAT1-202ENST00000421712 SMCR8Q8TEV9 937 aaPredicted RBP18.64■□□□□ 0.57
BRAT1-202ENST00000421712 CFHR5Q9BXR6 569 aa18.64■□□□□ 0.57
BRAT1-202ENST00000421712 PRDM10Q9NQV6 1147 aa18.64■□□□□ 0.57
BRAT1-202ENST00000421712 SLC45A1Q9Y2W3 748 aa18.64■□□□□ 0.57
BRAT1-202ENST00000421712 TACC3Q9Y6A5 838 aa18.64■□□□□ 0.57
BRAT1-202ENST00000421712 TLR2O60603 784 aa18.63■□□□□ 0.57
BRAT1-202ENST00000421712 SIAH1Q8IUQ4 282 aa18.63■□□□□ 0.57
BRAT1-202ENST00000421712 CEP95Q96GE4 821 aa18.63■□□□□ 0.57
BRAT1-202ENST00000421712 NBPF3Q9H094 633 aa18.63■□□□□ 0.57
BRAT1-202ENST00000421712 GOPCQ9HD26 462 aa18.63■□□□□ 0.57
BRAT1-202ENST00000421712 TMX2Q9Y320 296 aa18.63■□□□□ 0.57
BRAT1-202ENST00000421712 FKTNO75072 461 aa18.62■□□□□ 0.57
BRAT1-202ENST00000421712 TTLL1O95922 423 aa18.62■□□□□ 0.57
BRAT1-202ENST00000421712 FGRP09769 529 aa18.62■□□□□ 0.57
BRAT1-202ENST00000421712 PPP4R3BQ5MIZ7 849 aa18.62■□□□□ 0.57
BRAT1-202ENST00000421712 SPICE1Q8N0Z3 855 aa18.62■□□□□ 0.57
BRAT1-202ENST00000421712 ZNF296Q8WUU4 475 aaPredicted RBP18.62■□□□□ 0.57
BRAT1-202ENST00000421712 ESR2Q92731 530 aa18.62■□□□□ 0.57
BRAT1-202ENST00000421712 MAP4K1Q92918 833 aa18.62■□□□□ 0.57
BRAT1-202ENST00000421712 MTMR4Q9NYA4 1195 aa18.62■□□□□ 0.57
BRAT1-202ENST00000421712 NYAP2Q9P242 653 aa18.62■□□□□ 0.57
BRAT1-202ENST00000421712 CPA4Q9UI42 421 aa18.62■□□□□ 0.57
BRAT1-202ENST00000421712 RBM8AQ9Y5S9 174 aaKnown RBP18.62■□□□□ 0.57
BRAT1-202ENST00000421712 CASP8AP2Q9UKL3 1982 aa18.62■□□□□ 0.57
BRAT1-202ENST00000421712 USP17L15C9J2P7 530 aa18.61■□□□□ 0.57
BRAT1-202ENST00000421712 USP17L13C9JLJ4 530 aa18.61■□□□□ 0.57
BRAT1-202ENST00000421712 USP17L11C9JVI0 530 aa18.61■□□□□ 0.57
BRAT1-202ENST00000421712 USP17L18D6R9N7 530 aa18.61■□□□□ 0.57
BRAT1-202ENST00000421712 USP17L22D6RA61 530 aa18.61■□□□□ 0.57
BRAT1-202ENST00000421712 USP17L17D6RBQ6 530 aa18.61■□□□□ 0.57
BRAT1-202ENST00000421712 USP17L19D6RCP7 530 aa18.61■□□□□ 0.57
BRAT1-202ENST00000421712 USP17L20D6RJB6 530 aa18.61■□□□□ 0.57
BRAT1-202ENST00000421712 VCAM1P19320 739 aa18.61■□□□□ 0.57
BRAT1-202ENST00000421712 USP17L24Q0WX57 530 aa18.61■□□□□ 0.57
BRAT1-202ENST00000421712 TRDNQ13061 729 aa18.61■□□□□ 0.57
BRAT1-202ENST00000421712 C12orf42Q96LP6 360 aa18.61■□□□□ 0.57
BRAT1-202ENST00000421712 LSG1Q9H089 658 aaKnown RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms