RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 BRMS1Q9HCU9 246 aa12.55□□□□□ -0.4
DDX56-203ENST00000421223 ZNF219Q9P2Y4 722 aaPredicted RBP12.55□□□□□ -0.4
DDX56-203ENST00000421223 BAG3O95817 575 aa12.55□□□□□ -0.4
DDX56-203ENST00000421223 SKILP12757 684 aa12.55□□□□□ -0.4
DDX56-203ENST00000421223 PLCD1P51178 756 aa12.55□□□□□ -0.4
DDX56-203ENST00000421223 KLHL10Q6JEL2 608 aa12.55□□□□□ -0.4
DDX56-203ENST00000421223 FOXP4Q8IVH2 680 aaPredicted RBP12.55□□□□□ -0.4
DDX56-203ENST00000421223 RASGRP4Q8TDF6 673 aa12.55□□□□□ -0.4
DDX56-203ENST00000421223 MYH2Q9UKX2 1941 aa12.55□□□□□ -0.4
DDX56-203ENST00000421223 XDHP47989 1333 aa12.54□□□□□ -0.4
DDX56-203ENST00000421223 LRP5O75197 1615 aa12.54□□□□□ -0.4
DDX56-203ENST00000421223 VWA3AA6NCI4 1184 aa12.54□□□□□ -0.4
DDX56-203ENST00000421223 WNT7AO00755 349 aa12.54□□□□□ -0.4
DDX56-203ENST00000421223 MCM7P33993 719 aa12.54□□□□□ -0.4
DDX56-203ENST00000421223 PICALMQ13492 652 aa12.54□□□□□ -0.4
DDX56-203ENST00000421223 RASGRP2Q7LDG7 609 aa12.54□□□□□ -0.4
DDX56-203ENST00000421223 STAG2Q8N3U4 1231 aa12.54□□□□□ -0.4
DDX56-203ENST00000421223 PRR29P0C7W0 189 aa12.54□□□□□ -0.4
DDX56-203ENST00000421223 GYS1P13807 737 aa12.54□□□□□ -0.4
DDX56-203ENST00000421223 CFAP100Q494V2 611 aa12.54□□□□□ -0.4
DDX56-203ENST00000421223 MFSD14BQ5SR56 506 aa12.54□□□□□ -0.4
DDX56-203ENST00000421223 TRMT44Q8IYL2 757 aaKnown RBP12.54□□□□□ -0.4
DDX56-203ENST00000421223 ARPP21Q9UBL0 812 aaPredicted RBP12.54□□□□□ -0.4
DDX56-203ENST00000421223 GGA1Q9UJY5 639 aa12.54□□□□□ -0.4
DDX56-203ENST00000421223 CDK11BP21127 795 aaKnown RBP12.54□□□□□ -0.4
DDX56-203ENST00000421223 CDC25AP30304 524 aa12.54□□□□□ -0.4
DDX56-203ENST00000421223 HOMER1Q86YM7 354 aa12.54□□□□□ -0.4
DDX56-203ENST00000421223 FBXO2Q9UK22 296 aaPredicted RBP12.54□□□□□ -0.4
DDX56-203ENST00000421223 ADAMTS3O15072 1205 aa12.53□□□□□ -0.4
DDX56-203ENST00000421223 BTDP43251 543 aa12.53□□□□□ -0.4
DDX56-203ENST00000421223 RBM6P78332 1123 aaKnown RBP12.53□□□□□ -0.4
DDX56-203ENST00000421223 GTF2IP78347 998 aa12.53□□□□□ -0.4
DDX56-203ENST00000421223 TMTC3Q6ZXV5 915 aa12.53□□□□□ -0.4
DDX56-203ENST00000421223 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.53□□□□□ -0.4
DDX56-203ENST00000421223 LRRC8AQ8IWT6 810 aa12.53□□□□□ -0.4
DDX56-203ENST00000421223 PNMA1Q8ND90 353 aa12.53□□□□□ -0.4
DDX56-203ENST00000421223 CD209Q9NNX6 404 aa12.53□□□□□ -0.4
DDX56-203ENST00000421223 HPSEQ9Y251 543 aa12.53□□□□□ -0.4
DDX56-203ENST00000421223 LEMD3Q9Y2U8 911 aa12.53□□□□□ -0.4
DDX56-203ENST00000421223 WNK3Q9BYP7 1800 aa12.53□□□□□ -0.4
DDX56-203ENST00000421223 SMTNL1A8MU46 457 aa12.53□□□□□ -0.4
DDX56-203ENST00000421223 G3V3G9 751 aa12.53□□□□□ -0.4
DDX56-203ENST00000421223 PRPF3O43395 683 aaKnown RBP12.53□□□□□ -0.4
DDX56-203ENST00000421223 RAD21O60216 631 aa12.53□□□□□ -0.4
DDX56-203ENST00000421223 COBLO75128 1261 aa12.53□□□□□ -0.4
DDX56-203ENST00000421223 CALM1P0DP23 149 aa12.53□□□□□ -0.4
DDX56-203ENST00000421223 CALM2P0DP24 149 aa12.53□□□□□ -0.4
DDX56-203ENST00000421223 CALM3P0DP25 149 aa12.53□□□□□ -0.4
DDX56-203ENST00000421223 PTPREP23469 700 aa12.53□□□□□ -0.4
DDX56-203ENST00000421223 GOLGA8FQ08AF8 430 aa12.53□□□□□ -0.4
DDX56-203ENST00000421223 GOLGA8DPQ0D2H9 430 aa12.53□□□□□ -0.4
DDX56-203ENST00000421223 DCAF8Q5TAQ9 597 aa12.53□□□□□ -0.4
DDX56-203ENST00000421223 TEX11Q8IYF3 940 aa12.53□□□□□ -0.4
DDX56-203ENST00000421223 MRFAP1L1Q96HT8 127 aa12.53□□□□□ -0.4
DDX56-203ENST00000421223 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.53□□□□□ -0.4
DDX56-203ENST00000421223 RBM28Q9NW13 759 aaKnown RBP12.53□□□□□ -0.4
DDX56-203ENST00000421223 FANCLQ9NW38 375 aa12.53□□□□□ -0.4
DDX56-203ENST00000421223 TRPC5Q9UL62 973 aaPredicted RBP12.53□□□□□ -0.4
DDX56-203ENST00000421223 CEP131Q9UPN4 1083 aa12.53□□□□□ -0.4
DDX56-203ENST00000421223 CICQ96RK0 1608 aaPredicted RBP12.52□□□□□ -0.4
DDX56-203ENST00000421223 EIF6P56537 245 aaKnown RBP12.52□□□□□ -0.4
DDX56-203ENST00000421223 FANCCQ00597 558 aa12.52□□□□□ -0.4
DDX56-203ENST00000421223 RASSF8Q8NHQ8 419 aa12.52□□□□□ -0.4
DDX56-203ENST00000421223 PDCL3Q9H2J4 239 aa12.52□□□□□ -0.4
DDX56-203ENST00000421223 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.52□□□□□ -0.4
DDX56-203ENST00000421223 TNNT1P13805 278 aa12.52□□□□□ -0.41
DDX56-203ENST00000421223 STX17P56962 302 aa12.52□□□□□ -0.41
DDX56-203ENST00000421223 POSTNQ15063 836 aa12.52□□□□□ -0.41
DDX56-203ENST00000421223 C12orf60Q5U649 245 aa12.52□□□□□ -0.41
DDX56-203ENST00000421223 HEATR3Q7Z4Q2 680 aa12.52□□□□□ -0.41
DDX56-203ENST00000421223 SMARCE1Q969G3 411 aa12.52□□□□□ -0.41
DDX56-203ENST00000421223 HOOK1Q9UJC3 728 aaKnown RBP12.52□□□□□ -0.41
DDX56-203ENST00000421223 USP27XA6NNY8 438 aa12.51□□□□□ -0.41
DDX56-203ENST00000421223 SCG2P13521 617 aa12.51□□□□□ -0.41
DDX56-203ENST00000421223 UBASH3AP57075 661 aa12.51□□□□□ -0.41
DDX56-203ENST00000421223 FUT2Q10981 343 aa12.51□□□□□ -0.41
DDX56-203ENST00000421223 PTGDRQ13258 359 aa12.51□□□□□ -0.41
DDX56-203ENST00000421223 DOK7Q18PE1 504 aa12.51□□□□□ -0.41
DDX56-203ENST00000421223 MSL1Q68DK7 614 aa12.51□□□□□ -0.41
DDX56-203ENST00000421223 SARM1Q6SZW1 724 aa12.51□□□□□ -0.41
DDX56-203ENST00000421223 RBM17Q96I25 401 aaKnown RBP12.51□□□□□ -0.41
DDX56-203ENST00000421223 MXD3Q9BW11 206 aa12.51□□□□□ -0.41
DDX56-203ENST00000421223 IL17RBQ9NRM6 502 aa12.51□□□□□ -0.41
DDX56-203ENST00000421223 SPTLC3Q9NUV7 552 aa12.51□□□□□ -0.41
DDX56-203ENST00000421223 LDHCP07864 332 aa12.51□□□□□ -0.41
DDX56-203ENST00000421223 TTC38Q5R3I4 469 aa12.51□□□□□ -0.41
DDX56-203ENST00000421223 DPF2Q92785 391 aa12.51□□□□□ -0.41
DDX56-203ENST00000421223 PLIN2Q99541 437 aa12.51□□□□□ -0.41
DDX56-203ENST00000421223 PHF20Q9BVI0 1012 aa12.51□□□□□ -0.41
DDX56-203ENST00000421223 POLLQ9UGP5 575 aa12.51□□□□□ -0.41
DDX56-203ENST00000421223 SPATA31A6Q5VVP1 1343 aa12.51□□□□□ -0.41
DDX56-203ENST00000421223 ORC4O43929 436 aa12.51□□□□□ -0.41
DDX56-203ENST00000421223 KIF5BP33176 963 aa12.51□□□□□ -0.41
DDX56-203ENST00000421223 GSTO1P78417 241 aa12.51□□□□□ -0.41
DDX56-203ENST00000421223 ATP2B2Q01814 1243 aa12.51□□□□□ -0.41
DDX56-203ENST00000421223 RCSD1Q6JBY9 416 aa12.51□□□□□ -0.41
DDX56-203ENST00000421223 SMYD4Q8IYR2 804 aaPredicted RBP12.51□□□□□ -0.41
DDX56-203ENST00000421223 SYMPKQ92797 1274 aaKnown RBP12.51□□□□□ -0.41
DDX56-203ENST00000421223 TIGD1Q96MW7 591 aa12.51□□□□□ -0.41
DDX56-203ENST00000421223 C4AP0C0L4 1744 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms