RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 USP17L13C9JLJ4 530 aa21.02■□□□□ 0.96
MSH6-203ENST00000420813 USP17L11C9JVI0 530 aa21.02■□□□□ 0.96
MSH6-203ENST00000420813 USP17L18D6R9N7 530 aa21.02■□□□□ 0.96
MSH6-203ENST00000420813 USP17L22D6RA61 530 aa21.02■□□□□ 0.96
MSH6-203ENST00000420813 USP17L17D6RBQ6 530 aa21.02■□□□□ 0.96
MSH6-203ENST00000420813 USP17L19D6RCP7 530 aa21.02■□□□□ 0.96
MSH6-203ENST00000420813 USP17L20D6RJB6 530 aa21.02■□□□□ 0.96
MSH6-203ENST00000420813 XRCC5P13010 732 aaKnown RBP21.02■□□□□ 0.96
MSH6-203ENST00000420813 USP17L24Q0WX57 530 aa21.02■□□□□ 0.96
MSH6-203ENST00000420813 RAB3GAP1Q15042 981 aa21.02■□□□□ 0.96
MSH6-203ENST00000420813 RPTORQ8N122 1335 aa21.02■□□□□ 0.95
MSH6-203ENST00000420813 ATP5JP18859 108 aa21.01■□□□□ 0.95
MSH6-203ENST00000420813 PDE3AQ14432 1141 aa21.01■□□□□ 0.95
MSH6-203ENST00000420813 ANKLE1Q8NAG6 615 aa21.01■□□□□ 0.95
MSH6-203ENST00000420813 TRIB2Q92519 343 aa21.01■□□□□ 0.95
MSH6-203ENST00000420813 HMX1Q9NP08 348 aaPredicted RBP21.01■□□□□ 0.95
MSH6-203ENST00000420813 PAG1Q9NWQ8 432 aa21.01■□□□□ 0.95
MSH6-203ENST00000420813 MCM9Q9NXL9 1143 aa21.01■□□□□ 0.95
MSH6-203ENST00000420813 NR2E3Q9Y5X4 410 aa21.01■□□□□ 0.95
MSH6-203ENST00000420813 PEX10O60683 326 aa21■□□□□ 0.95
MSH6-203ENST00000420813 FXR1P51114 621 aaKnown RBP eCLIP21■□□□□ 0.95
MSH6-203ENST00000420813 ZYXQ15942 572 aaKnown RBP21■□□□□ 0.95
MSH6-203ENST00000420813 Q3C1V9 767 aa21■□□□□ 0.95
MSH6-203ENST00000420813 CCAR1Q8IX12 1150 aaKnown RBP21■□□□□ 0.95
MSH6-203ENST00000420813 TRMT44Q8IYL2 757 aaKnown RBP21■□□□□ 0.95
MSH6-203ENST00000420813 LCORLQ8N3X6 602 aa21■□□□□ 0.95
MSH6-203ENST00000420813 PAGR1Q9BTK6 254 aa21■□□□□ 0.95
MSH6-203ENST00000420813 DCP1AQ9NPI6 582 aaPredicted RBP21■□□□□ 0.95
MSH6-203ENST00000420813 RABGAP1Q9Y3P9 1069 aa21■□□□□ 0.95
MSH6-203ENST00000420813 VCAM1P19320 739 aa20.99■□□□□ 0.95
MSH6-203ENST00000420813 CYP2B6P20813 491 aa20.99■□□□□ 0.95
MSH6-203ENST00000420813 GUCY1A2P33402 732 aa20.99■□□□□ 0.95
MSH6-203ENST00000420813 ADD2P35612 726 aa20.99■□□□□ 0.95
MSH6-203ENST00000420813 MAP3K21Q5TCX8 1036 aa20.99■□□□□ 0.95
MSH6-203ENST00000420813 POTEEQ6S8J3 1075 aa20.99■□□□□ 0.95
MSH6-203ENST00000420813 LBX2Q6XYB7 198 aa20.99■□□□□ 0.95
MSH6-203ENST00000420813 CATSPERGQ6ZRH7 1159 aa20.99■□□□□ 0.95
MSH6-203ENST00000420813 ACER1Q8TDN7 264 aa20.99■□□□□ 0.95
MSH6-203ENST00000420813 SDR42E1Q8WUS8 393 aa20.99■□□□□ 0.95
MSH6-203ENST00000420813 USP6NLQ92738 828 aa20.99■□□□□ 0.95
MSH6-203ENST00000420813 EDC3Q96F86 508 aaKnown RBP20.99■□□□□ 0.95
MSH6-203ENST00000420813 HAUS7Q99871 368 aa20.99■□□□□ 0.95
MSH6-203ENST00000420813 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.99■□□□□ 0.95
MSH6-203ENST00000420813 PORCNQ9H237 461 aa20.99■□□□□ 0.95
MSH6-203ENST00000420813 BOLA2Q9H3K6 86 aa20.99■□□□□ 0.95
MSH6-203ENST00000420813 CCNA1P78396 465 aa20.98■□□□□ 0.95
MSH6-203ENST00000420813 TRIM32Q13049 653 aa20.98■□□□□ 0.95
MSH6-203ENST00000420813 GPR142Q7Z601 462 aa20.98■□□□□ 0.95
MSH6-203ENST00000420813 PLEKHH3Q7Z736 793 aa20.98■□□□□ 0.95
MSH6-203ENST00000420813 RLFQ13129 1914 aa20.98■□□□□ 0.95
MSH6-203ENST00000420813 RGS2P41220 211 aa20.97■□□□□ 0.95
MSH6-203ENST00000420813 SEPT2Q15019 361 aa20.97■□□□□ 0.95
MSH6-203ENST00000420813 MORN1Q5T089 497 aa20.97■□□□□ 0.95
MSH6-203ENST00000420813 CHRDL2Q6WN34 429 aa20.97■□□□□ 0.95
MSH6-203ENST00000420813 NECAB2Q7Z6G3 386 aa20.97■□□□□ 0.95
MSH6-203ENST00000420813 LRRCC1Q9C099 1032 aa20.97■□□□□ 0.95
MSH6-203ENST00000420813 ATP8A2Q9NTI2 1148 aa20.97■□□□□ 0.95
MSH6-203ENST00000420813 SWAP70Q9UH65 585 aa20.97■□□□□ 0.95
MSH6-203ENST00000420813 FRMPD3Q5JV73 1810 aa20.97■□□□□ 0.95
MSH6-203ENST00000420813 A0A0G2JMZ2 1700 aa20.96■□□□□ 0.95
MSH6-203ENST00000420813 CNMDO75829 334 aa20.96■□□□□ 0.95
MSH6-203ENST00000420813 GLRX3O76003 335 aaKnown RBP20.96■□□□□ 0.95
MSH6-203ENST00000420813 PRKAR2AP13861 404 aaKnown RBP20.96■□□□□ 0.95
MSH6-203ENST00000420813 ZKSCAN1P17029 563 aaPredicted RBP20.96■□□□□ 0.95
MSH6-203ENST00000420813 PAWRQ96IZ0 340 aaKnown RBP20.96■□□□□ 0.95
MSH6-203ENST00000420813 APBA2Q99767 749 aa20.96■□□□□ 0.95
MSH6-203ENST00000420813 BCL11AQ9H165 835 aa20.96■□□□□ 0.95
MSH6-203ENST00000420813 ARMT1Q9H993 441 aa20.96■□□□□ 0.95
MSH6-203ENST00000420813 PARP14Q460N5 1801 aa20.96■□□□□ 0.95
MSH6-203ENST00000420813 EVI5O60447 810 aa20.95■□□□□ 0.94
MSH6-203ENST00000420813 MBD4O95243 580 aa20.95■□□□□ 0.94
MSH6-203ENST00000420813 EVX2Q03828 476 aa20.95■□□□□ 0.94
MSH6-203ENST00000420813 UBE3CQ15386 1083 aa20.95■□□□□ 0.94
MSH6-203ENST00000420813 C20orf194Q5TEA3 1177 aa20.95■□□□□ 0.94
MSH6-203ENST00000420813 TMEM179Q6ZVK1 233 aa20.95■□□□□ 0.94
MSH6-203ENST00000420813 RPAP3Q9H6T3 665 aaPredicted RBP20.95■□□□□ 0.94
MSH6-203ENST00000420813 OGDHLQ9ULD0 1010 aa20.95■□□□□ 0.94
MSH6-203ENST00000420813 ZNF236Q9UL36 1845 aa20.94■□□□□ 0.94
MSH6-203ENST00000420813 MPHOSPH10O00566 681 aaKnown RBP20.94■□□□□ 0.94
MSH6-203ENST00000420813 MAP2K5Q13163 448 aa20.94■□□□□ 0.94
MSH6-203ENST00000420813 DIS3LQ8TF46 1054 aaKnown RBP20.94■□□□□ 0.94
MSH6-203ENST00000420813 PRO3102Q9H379 93 aa20.94■□□□□ 0.94
MSH6-203ENST00000420813 CWC22Q9HCG8 908 aaKnown RBP20.94■□□□□ 0.94
MSH6-203ENST00000420813 RANBP2P49792 3224 aaKnown RBP20.94■□□□□ 0.94
MSH6-203ENST00000420813 A0A1W2PRG0 241 aa20.93■□□□□ 0.94
MSH6-203ENST00000420813 SPDYE16A6NNV3 312 aaPredicted RBP20.93■□□□□ 0.94
MSH6-203ENST00000420813 CYP2D6P10635 497 aa20.93■□□□□ 0.94
MSH6-203ENST00000420813 ZSCAN25Q6NSZ9 544 aa20.93■□□□□ 0.94
MSH6-203ENST00000420813 AMOTL1Q8IY63 956 aa20.93■□□□□ 0.94
MSH6-203ENST00000420813 NBPF3Q9H094 633 aa20.93■□□□□ 0.94
MSH6-203ENST00000420813 RBM27Q9P2N5 1060 aaKnown RBP20.93■□□□□ 0.94
MSH6-203ENST00000420813 SLC15A5A6NIM6 579 aa20.92■□□□□ 0.94
MSH6-203ENST00000420813 PRKAB2O43741 272 aa20.92■□□□□ 0.94
MSH6-203ENST00000420813 MNX1P50219 401 aaPredicted RBP20.92■□□□□ 0.94
MSH6-203ENST00000420813 CACNB2Q08289 660 aaPredicted RBP20.92■□□□□ 0.94
MSH6-203ENST00000420813 SLFNL1Q499Z3 407 aa20.92■□□□□ 0.94
MSH6-203ENST00000420813 SLC44A5Q8NCS7 719 aa20.92■□□□□ 0.94
MSH6-203ENST00000420813 DDRGK1Q96HY6 314 aa20.92■□□□□ 0.94
MSH6-203ENST00000420813 BTBD7Q9P203 1132 aa20.92■□□□□ 0.94
MSH6-203ENST00000420813 PTPREP23469 700 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms