RNA–Protein interactions for RNA: ENST00000420163.1

SEC22C-206, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-206ENST00000420163 SH3D19Q5HYK7 790 aa19.74■□□□□ 0.75
SEC22C-206ENST00000420163 TMEM179Q6ZVK1 233 aa19.74■□□□□ 0.75
SEC22C-206ENST00000420163 ZNF296Q8WUU4 475 aaPredicted RBP19.74■□□□□ 0.75
SEC22C-206ENST00000420163 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.74■□□□□ 0.75
SEC22C-206ENST00000420163 A0A1W2PRG0 241 aa19.73■□□□□ 0.75
SEC22C-206ENST00000420163 ZYXQ15942 572 aaKnown RBP19.73■□□□□ 0.75
SEC22C-206ENST00000420163 PROCA1Q8NCQ7 364 aaPredicted RBP19.73■□□□□ 0.75
SEC22C-206ENST00000420163 CCDC17Q96LX7 622 aa19.73■□□□□ 0.75
SEC22C-206ENST00000420163 MKNK2Q9HBH9 465 aa19.73■□□□□ 0.75
SEC22C-206ENST00000420163 INCENPQ9NQS7 918 aa19.73■□□□□ 0.75
SEC22C-206ENST00000420163 AGTPBP1Q9UPW5 1226 aa19.73■□□□□ 0.75
SEC22C-206ENST00000420163 ZMYM6O95789 1325 aa19.73■□□□□ 0.75
SEC22C-206ENST00000420163 ADGRA2Q96PE1 1338 aa19.73■□□□□ 0.75
SEC22C-206ENST00000420163 CYP2C8P10632 490 aa19.72■□□□□ 0.75
SEC22C-206ENST00000420163 MFAP1P55081 439 aaKnown RBP19.72■□□□□ 0.75
SEC22C-206ENST00000420163 NOM1Q5C9Z4 860 aaKnown RBP19.72■□□□□ 0.75
SEC22C-206ENST00000420163 SIAH1Q8IUQ4 282 aa19.72■□□□□ 0.75
SEC22C-206ENST00000420163 NBPF3Q9H094 633 aa19.72■□□□□ 0.75
SEC22C-206ENST00000420163 ZFYVE28Q9HCC9 887 aa19.72■□□□□ 0.75
SEC22C-206ENST00000420163 EMILIN3Q9NT22 766 aa19.72■□□□□ 0.75
SEC22C-206ENST00000420163 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.72■□□□□ 0.75
SEC22C-206ENST00000420163 BMP2KLQ5H9B9 411 aa19.71■□□□□ 0.75
SEC22C-206ENST00000420163 FEZ1Q99689 392 aa19.71■□□□□ 0.75
SEC22C-206ENST00000420163 PARP14Q460N5 1801 aa19.71■□□□□ 0.75
SEC22C-206ENST00000420163 RAD50Q92878 1312 aa19.71■□□□□ 0.75
SEC22C-206ENST00000420163 MGAMO43451 1857 aa19.71■□□□□ 0.75
SEC22C-206ENST00000420163 C19orf81C9J6K1 198 aa19.7■□□□□ 0.74
SEC22C-206ENST00000420163 TLR2O60603 784 aa19.7■□□□□ 0.74
SEC22C-206ENST00000420163 HAND2P61296 217 aa19.7■□□□□ 0.74
SEC22C-206ENST00000420163 CAP1Q01518 475 aa19.7■□□□□ 0.74
SEC22C-206ENST00000420163 ICA1Q05084 483 aa19.7■□□□□ 0.74
SEC22C-206ENST00000420163 KIAA1683Q9H0B3 1180 aa19.7■□□□□ 0.74
SEC22C-206ENST00000420163 TMOD4Q9NZQ9 345 aa19.7■□□□□ 0.74
SEC22C-206ENST00000420163 ANAPC4Q9UJX5 808 aa19.7■□□□□ 0.74
SEC22C-206ENST00000420163 SLC45A1Q9Y2W3 748 aa19.7■□□□□ 0.74
SEC22C-206ENST00000420163 RLFQ13129 1914 aa19.7■□□□□ 0.74
SEC22C-206ENST00000420163 FKTNO75072 461 aa19.69■□□□□ 0.74
SEC22C-206ENST00000420163 USP17L2Q6R6M4 530 aa19.69■□□□□ 0.74
SEC22C-206ENST00000420163 C12orf42Q96LP6 360 aa19.69■□□□□ 0.74
SEC22C-206ENST00000420163 PARK7Q99497 189 aaKnown RBP19.69■□□□□ 0.74
SEC22C-206ENST00000420163 CPA4Q9UI42 421 aa19.69■□□□□ 0.74
SEC22C-206ENST00000420163 IGKV6D-41A0A0C4DH26 115 aa19.68■□□□□ 0.74
SEC22C-206ENST00000420163 SGSM2O43147 1006 aa19.68■□□□□ 0.74
SEC22C-206ENST00000420163 SLC3A2P08195 630 aaKnown RBP19.68■□□□□ 0.74
SEC22C-206ENST00000420163 PDE4BQ07343 736 aa19.68■□□□□ 0.74
SEC22C-206ENST00000420163 FAM47AQ5JRC9 791 aa19.68■□□□□ 0.74
SEC22C-206ENST00000420163 KIAA1755Q5JYT7 1200 aa19.68■□□□□ 0.74
SEC22C-206ENST00000420163 TBC1D10CQ8IV04 446 aa19.68■□□□□ 0.74
SEC22C-206ENST00000420163 DSCC1Q9BVC3 393 aa19.68■□□□□ 0.74
SEC22C-206ENST00000420163 PLIN4Q96Q06 1357 aa19.68■□□□□ 0.74
SEC22C-206ENST00000420163 EEF2P13639 858 aaKnown RBP19.67■□□□□ 0.74
SEC22C-206ENST00000420163 VCAM1P19320 739 aa19.67■□□□□ 0.74
SEC22C-206ENST00000420163 PTH1RQ03431 593 aa19.67■□□□□ 0.74
SEC22C-206ENST00000420163 C17orf99Q6UX52 265 aa19.67■□□□□ 0.74
SEC22C-206ENST00000420163 ZNF444Q8N0Y2 327 aaPredicted RBP19.67■□□□□ 0.74
SEC22C-206ENST00000420163 NKX2-3Q8TAU0 364 aa19.67■□□□□ 0.74
SEC22C-206ENST00000420163 CD99L2Q8TCZ2 262 aa19.67■□□□□ 0.74
SEC22C-206ENST00000420163 RUFY2Q8WXA3 655 aa19.67■□□□□ 0.74
SEC22C-206ENST00000420163 ASCC2Q9H1I8 757 aaPredicted RBP19.67■□□□□ 0.74
SEC22C-206ENST00000420163 KANSL2Q9H9L4 492 aa19.67■□□□□ 0.74
SEC22C-206ENST00000420163 ZNF287Q9HBT7 754 aa19.67■□□□□ 0.74
SEC22C-206ENST00000420163 ARHGEF10LQ9HCE6 1279 aa19.67■□□□□ 0.74
SEC22C-206ENST00000420163 DOCK3Q8IZD9 2030 aa19.66■□□□□ 0.74
SEC22C-206ENST00000420163 ORC4O43929 436 aa19.66■□□□□ 0.74
SEC22C-206ENST00000420163 FGRP09769 529 aa19.66■□□□□ 0.74
SEC22C-206ENST00000420163 BCRP11274 1271 aa19.66■□□□□ 0.74
SEC22C-206ENST00000420163 USP14P54578 494 aa19.66■□□□□ 0.74
SEC22C-206ENST00000420163 TFAP4Q01664 338 aa19.66■□□□□ 0.74
SEC22C-206ENST00000420163 ATP2B2Q01814 1243 aa19.66■□□□□ 0.74
SEC22C-206ENST00000420163 SP3Q02447 781 aa19.66■□□□□ 0.74
SEC22C-206ENST00000420163 NEDD1Q8NHV4 660 aa19.66■□□□□ 0.74
SEC22C-206ENST00000420163 TMX2Q9Y320 296 aa19.66■□□□□ 0.74
SEC22C-206ENST00000420163 HOXA7P31268 230 aaPredicted RBP19.65■□□□□ 0.74
SEC22C-206ENST00000420163 CEP95Q96GE4 821 aa19.65■□□□□ 0.74
SEC22C-206ENST00000420163 PNMA3Q9UL41 463 aa19.65■□□□□ 0.74
SEC22C-206ENST00000420163 ECM2O94769 699 aaPredicted RBP19.64■□□□□ 0.73
SEC22C-206ENST00000420163 TSPY3P0CV98 308 aa19.64■□□□□ 0.73
SEC22C-206ENST00000420163 TSPY8P0CW00 308 aa19.64■□□□□ 0.73
SEC22C-206ENST00000420163 PABPC4Q13310 644 aaKnown RBP eCLIP19.64■□□□□ 0.73
SEC22C-206ENST00000420163 SMCR8Q8TEV9 937 aaPredicted RBP19.64■□□□□ 0.73
SEC22C-206ENST00000420163 STAG1Q8WVM7 1258 aa19.64■□□□□ 0.73
SEC22C-206ENST00000420163 ESYT1Q9BSJ8 1104 aa19.64■□□□□ 0.73
SEC22C-206ENST00000420163 ARHGAP39Q9C0H5 1083 aa19.64■□□□□ 0.73
SEC22C-206ENST00000420163 A0A0G2JMZ2 1700 aa19.64■□□□□ 0.73
SEC22C-206ENST00000420163 COL11A1P12107 1806 aaPredicted RBP19.63■□□□□ 0.73
SEC22C-206ENST00000420163 NEDD4P46934 1319 aa19.63■□□□□ 0.73
SEC22C-206ENST00000420163 ZNF213O14771 459 aa19.63■□□□□ 0.73
SEC22C-206ENST00000420163 NMT2O60551 498 aa19.63■□□□□ 0.73
SEC22C-206ENST00000420163 PEX10O60683 326 aa19.63■□□□□ 0.73
SEC22C-206ENST00000420163 OSBPP22059 807 aa19.63■□□□□ 0.73
SEC22C-206ENST00000420163 CTGFP29279 349 aa19.63■□□□□ 0.73
SEC22C-206ENST00000420163 IRX3P78415 501 aaPredicted RBP19.63■□□□□ 0.73
SEC22C-206ENST00000420163 RRP12Q5JTH9 1297 aaKnown RBP19.63■□□□□ 0.73
SEC22C-206ENST00000420163 AKNAD1Q5T1N1 836 aa19.63■□□□□ 0.73
SEC22C-206ENST00000420163 POTEEQ6S8J3 1075 aa19.63■□□□□ 0.73
SEC22C-206ENST00000420163 CTU1Q7Z7A3 348 aaKnown RBP19.63■□□□□ 0.73
SEC22C-206ENST00000420163 TNS4Q8IZW8 715 aa19.63■□□□□ 0.73
SEC22C-206ENST00000420163 SPICE1Q8N0Z3 855 aa19.63■□□□□ 0.73
SEC22C-206ENST00000420163 ERO1AQ96HE7 468 aa19.63■□□□□ 0.73
SEC22C-206ENST00000420163 P2RX7Q99572 595 aaKnown RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms