RNA–Protein interactions for RNA: ENST00000419764.1

RHBDF1-203, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 5

Gene RHBDF1, Length 435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-203ENST00000419764 PICALMQ13492 652 aa13.05□□□□□ -0.32
RHBDF1-203ENST00000419764 RAB3GAP1Q15042 981 aa13.05□□□□□ -0.32
RHBDF1-203ENST00000419764 NBPF12Q5TAG4 269 aaPredicted RBP13.05□□□□□ -0.32
RHBDF1-203ENST00000419764 SYNE3Q6ZMZ3 975 aa13.05□□□□□ -0.32
RHBDF1-203ENST00000419764 REM2Q8IYK8 340 aaPredicted RBP13.05□□□□□ -0.32
RHBDF1-203ENST00000419764 PTPN18Q99952 460 aa13.05□□□□□ -0.32
RHBDF1-203ENST00000419764 CFHR5Q9BXR6 569 aa13.05□□□□□ -0.32
RHBDF1-203ENST00000419764 AGXT2Q9BYV1 514 aa13.05□□□□□ -0.32
RHBDF1-203ENST00000419764 DEFB129Q9H1M3 183 aa13.05□□□□□ -0.32
RHBDF1-203ENST00000419764 ZNF287Q9HBT7 754 aa13.05□□□□□ -0.32
RHBDF1-203ENST00000419764 USP40Q9NVE5 1235 aa13.05□□□□□ -0.32
RHBDF1-203ENST00000419764 FLT1P17948 1338 aa13.05□□□□□ -0.32
RHBDF1-203ENST00000419764 SH2B2O14492 632 aaPredicted RBP13.04□□□□□ -0.32
RHBDF1-203ENST00000419764 DHX16O60231 1041 aaKnown RBP13.04□□□□□ -0.32
RHBDF1-203ENST00000419764 PFKFB2O60825 505 aa13.04□□□□□ -0.32
RHBDF1-203ENST00000419764 FKTNO75072 461 aa13.04□□□□□ -0.32
RHBDF1-203ENST00000419764 GJB2P29033 226 aa13.04□□□□□ -0.32
RHBDF1-203ENST00000419764 HDLBPQ00341 1268 aaKnown RBP13.04□□□□□ -0.32
RHBDF1-203ENST00000419764 WTAPQ15007 396 aa13.04□□□□□ -0.32
RHBDF1-203ENST00000419764 FBXO46Q6PJ61 603 aaPredicted RBP13.04□□□□□ -0.32
RHBDF1-203ENST00000419764 IQCA1Q86XH1 822 aa13.04□□□□□ -0.32
RHBDF1-203ENST00000419764 FBXL16Q8N461 479 aa13.04□□□□□ -0.32
RHBDF1-203ENST00000419764 CNKSR2Q8WXI2 1034 aa13.04□□□□□ -0.32
RHBDF1-203ENST00000419764 ZNF274Q96GC6 653 aaPredicted RBP13.04□□□□□ -0.32
RHBDF1-203ENST00000419764 WNK4Q96J92 1243 aa13.04□□□□□ -0.32
RHBDF1-203ENST00000419764 INCENPQ9NQS7 918 aa13.04□□□□□ -0.32
RHBDF1-203ENST00000419764 KIF3AQ9Y496 699 aa13.04□□□□□ -0.32
RHBDF1-203ENST00000419764 CPLX1O14810 134 aa13.03□□□□□ -0.32
RHBDF1-203ENST00000419764 USP2O75604 605 aaPredicted RBP13.03□□□□□ -0.32
RHBDF1-203ENST00000419764 PDCP20941 246 aa13.03□□□□□ -0.32
RHBDF1-203ENST00000419764 CCT2P78371 535 aaKnown RBP13.03□□□□□ -0.32
RHBDF1-203ENST00000419764 NFKBIBQ15653 356 aa13.03□□□□□ -0.32
RHBDF1-203ENST00000419764 MAP3K11Q16584 847 aa13.03□□□□□ -0.32
RHBDF1-203ENST00000419764 NOM1Q5C9Z4 860 aaKnown RBP13.03□□□□□ -0.32
RHBDF1-203ENST00000419764 C12orf60Q5U649 245 aa13.03□□□□□ -0.32
RHBDF1-203ENST00000419764 FOXD4L5Q5VV16 416 aaPredicted RBP13.03□□□□□ -0.32
RHBDF1-203ENST00000419764 OTOP1Q7RTM1 612 aa13.03□□□□□ -0.32
RHBDF1-203ENST00000419764 IFNL1Q8IU54 200 aa13.03□□□□□ -0.32
RHBDF1-203ENST00000419764 OGFOD1Q8N543 542 aa13.03□□□□□ -0.32
RHBDF1-203ENST00000419764 FAM184AQ8NB25 1140 aa13.03□□□□□ -0.32
RHBDF1-203ENST00000419764 FOXD4L4Q8WXT5 416 aaPredicted RBP13.03□□□□□ -0.32
RHBDF1-203ENST00000419764 TNPO1Q92973 898 aaKnown RBP13.03□□□□□ -0.32
RHBDF1-203ENST00000419764 ZDHHC15Q96MV8 337 aa13.03□□□□□ -0.32
RHBDF1-203ENST00000419764 ZKSCAN3Q9BRR0 538 aa13.03□□□□□ -0.32
RHBDF1-203ENST00000419764 LLPHQ9BRT6 129 aaKnown RBP13.03□□□□□ -0.32
RHBDF1-203ENST00000419764 MKNK2Q9HBH9 465 aa13.03□□□□□ -0.32
RHBDF1-203ENST00000419764 GPHNQ9NQX3 736 aaPredicted RBP13.03□□□□□ -0.32
RHBDF1-203ENST00000419764 TMOD2Q9NZR1 351 aa13.03□□□□□ -0.32
RHBDF1-203ENST00000419764 ZSWIM5Q9P217 1185 aa13.03□□□□□ -0.32
RHBDF1-203ENST00000419764 SERPINA10Q9UK55 444 aa13.03□□□□□ -0.32
RHBDF1-203ENST00000419764 SLC12A7Q9Y666 1083 aa13.03□□□□□ -0.32
RHBDF1-203ENST00000419764 SIPA1L1O43166 1804 aa13.03□□□□□ -0.32
RHBDF1-203ENST00000419764 ROBO3Q96MS0 1386 aa13.03□□□□□ -0.32
RHBDF1-203ENST00000419764 TSPY2A6NKD2 308 aa13.02□□□□□ -0.33
RHBDF1-203ENST00000419764 GOLGA6L22H0YM25 854 aa13.02□□□□□ -0.33
RHBDF1-203ENST00000419764 ZBTB43O43298 467 aa13.02□□□□□ -0.33
RHBDF1-203ENST00000419764 ORC4O43929 436 aa13.02□□□□□ -0.33
RHBDF1-203ENST00000419764 PRDM1O75626 825 aa13.02□□□□□ -0.33
RHBDF1-203ENST00000419764 PDIA3P30101 505 aaKnown RBP13.02□□□□□ -0.33
RHBDF1-203ENST00000419764 METAP2P50579 478 aaKnown RBP eCLIP13.02□□□□□ -0.33
RHBDF1-203ENST00000419764 RHBDL3P58872 404 aa13.02□□□□□ -0.33
RHBDF1-203ENST00000419764 SCRN1Q12765 414 aa13.02□□□□□ -0.33
RHBDF1-203ENST00000419764 CFAP100Q494V2 611 aa13.02□□□□□ -0.33
RHBDF1-203ENST00000419764 CPLX2Q6PUV4 134 aaKnown RBP13.02□□□□□ -0.33
RHBDF1-203ENST00000419764 APOBEC3FQ8IUX4 373 aaKnown RBP13.02□□□□□ -0.33
RHBDF1-203ENST00000419764 TMTC2Q8N394 836 aa13.02□□□□□ -0.33
RHBDF1-203ENST00000419764 MTMR14Q8NCE2 650 aa13.02□□□□□ -0.33
RHBDF1-203ENST00000419764 MTA3Q9BTC8 594 aa13.02□□□□□ -0.33
RHBDF1-203ENST00000419764 LY9Q9HBG7 655 aa13.02□□□□□ -0.33
RHBDF1-203ENST00000419764 ATAD5Q96QE3 1844 aa13.02□□□□□ -0.33
RHBDF1-203ENST00000419764 VPS37CA5D8V6 355 aaPredicted RBP13.01□□□□□ -0.33
RHBDF1-203ENST00000419764 SPDYE2BA6NHP3 402 aa13.01□□□□□ -0.33
RHBDF1-203ENST00000419764 GOLGA8AA7E2F4 631 aa13.01□□□□□ -0.33
RHBDF1-203ENST00000419764 HLA-DOAP06340 250 aa13.01□□□□□ -0.33
RHBDF1-203ENST00000419764 SPDYE6P0CI01 402 aa13.01□□□□□ -0.33
RHBDF1-203ENST00000419764 NT5C2P49902 561 aa13.01□□□□□ -0.33
RHBDF1-203ENST00000419764 HMGN5P82970 282 aaKnown RBP13.01□□□□□ -0.33
RHBDF1-203ENST00000419764 ST3GAL1Q11201 340 aa13.01□□□□□ -0.33
RHBDF1-203ENST00000419764 DLGAP5Q15398 846 aa13.01□□□□□ -0.33
RHBDF1-203ENST00000419764 PKN2Q16513 984 aaKnown RBP13.01□□□□□ -0.33
RHBDF1-203ENST00000419764 CDC42EP5Q6NZY7 148 aa13.01□□□□□ -0.33
RHBDF1-203ENST00000419764 ARMC9Q7Z3E5 817 aa13.01□□□□□ -0.33
RHBDF1-203ENST00000419764 TTC6Q86TZ1 520 aa13.01□□□□□ -0.33
RHBDF1-203ENST00000419764 MICU3Q86XE3 530 aa13.01□□□□□ -0.33
RHBDF1-203ENST00000419764 RAB11FIP4Q86YS3 637 aa13.01□□□□□ -0.33
RHBDF1-203ENST00000419764 ZNF444Q8N0Y2 327 aaPredicted RBP13.01□□□□□ -0.33
RHBDF1-203ENST00000419764 CD99L2Q8TCZ2 262 aa13.01□□□□□ -0.33
RHBDF1-203ENST00000419764 ZSCAN10Q96SZ4 725 aaPredicted RBP13.01□□□□□ -0.33
RHBDF1-203ENST00000419764 MRIQ9BWK5 157 aa13.01□□□□□ -0.33
RHBDF1-203ENST00000419764 TRIM34Q9BYJ4 488 aa13.01□□□□□ -0.33
RHBDF1-203ENST00000419764 NCOA5Q9HCD5 579 aaKnown RBP13.01□□□□□ -0.33
RHBDF1-203ENST00000419764 PCDH10Q9P2E7 1040 aa13.01□□□□□ -0.33
RHBDF1-203ENST00000419764 BRPF3Q9ULD4 1205 aa13.01□□□□□ -0.33
RHBDF1-203ENST00000419764 TRIM17Q9Y577 477 aa13.01□□□□□ -0.33
RHBDF1-203ENST00000419764 TNKSO95271 1327 aa13.01□□□□□ -0.33
RHBDF1-203ENST00000419764 PTPDC1A2A3K4 754 aa13□□□□□ -0.33
RHBDF1-203ENST00000419764 DDX11L8A8MPP1 907 aa13□□□□□ -0.33
RHBDF1-203ENST00000419764 STX6O43752 255 aa13□□□□□ -0.33
RHBDF1-203ENST00000419764 CDKL5O76039 1030 aa13□□□□□ -0.33
RHBDF1-203ENST00000419764 PDIA4P13667 645 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms