RNA–Protein interactions for RNA: ENST00000419442.1

RAPGEF1-205, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-205ENST00000419442 LBX2Q6XYB7 198 aa13.05□□□□□ -0.32
RAPGEF1-205ENST00000419442 TIFAQ96CG3 184 aa13.05□□□□□ -0.32
RAPGEF1-205ENST00000419442 GAS2L1Q99501 681 aaPredicted RBP13.05□□□□□ -0.32
RAPGEF1-205ENST00000419442 USP44Q9H0E7 712 aa13.05□□□□□ -0.32
RAPGEF1-205ENST00000419442 CEP126Q9P2H0 1117 aa13.05□□□□□ -0.32
RAPGEF1-205ENST00000419442 PI4KBQ9UBF8 816 aa13.05□□□□□ -0.32
RAPGEF1-205ENST00000419442 SEPT4O43236 478 aa13.04□□□□□ -0.32
RAPGEF1-205ENST00000419442 CLTBP09497 229 aa13.04□□□□□ -0.32
RAPGEF1-205ENST00000419442 ADORA1P30542 326 aa13.04□□□□□ -0.32
RAPGEF1-205ENST00000419442 ADCYAP1R1P41586 468 aa13.04□□□□□ -0.32
RAPGEF1-205ENST00000419442 OLFML2BQ68BL8 750 aa13.04□□□□□ -0.32
RAPGEF1-205ENST00000419442 DNAJC18Q9H819 358 aa13.04□□□□□ -0.32
RAPGEF1-205ENST00000419442 SMCHD1A6NHR9 2005 aa13.04□□□□□ -0.32
RAPGEF1-205ENST00000419442 GBF1Q92538 1859 aa13.04□□□□□ -0.32
RAPGEF1-205ENST00000419442 A0A0G2JMZ2 1700 aa13.03□□□□□ -0.32
RAPGEF1-205ENST00000419442 LDHCP07864 332 aa13.03□□□□□ -0.32
RAPGEF1-205ENST00000419442 FPGSQ05932 587 aa13.03□□□□□ -0.32
RAPGEF1-205ENST00000419442 LRRC41Q15345 812 aa13.03□□□□□ -0.32
RAPGEF1-205ENST00000419442 SHROOM1Q2M3G4 852 aaPredicted RBP13.03□□□□□ -0.32
RAPGEF1-205ENST00000419442 USP17L2Q6R6M4 530 aa13.03□□□□□ -0.32
RAPGEF1-205ENST00000419442 ERICH6Q7L0X2 663 aa13.03□□□□□ -0.32
RAPGEF1-205ENST00000419442 CWC22Q9HCG8 908 aaKnown RBP13.03□□□□□ -0.32
RAPGEF1-205ENST00000419442 ZBTB21Q9ULJ3 1066 aa13.03□□□□□ -0.32
RAPGEF1-205ENST00000419442 PHF24Q9UPV7 400 aa13.03□□□□□ -0.32
RAPGEF1-205ENST00000419442 NDUFB9Q9Y6M9 179 aa13.03□□□□□ -0.32
RAPGEF1-205ENST00000419442 PIEZO1Q92508 2521 aa13.02□□□□□ -0.32
RAPGEF1-205ENST00000419442 USP17L15C9J2P7 530 aa13.02□□□□□ -0.33
RAPGEF1-205ENST00000419442 USP17L13C9JLJ4 530 aa13.02□□□□□ -0.33
RAPGEF1-205ENST00000419442 USP17L11C9JVI0 530 aa13.02□□□□□ -0.33
RAPGEF1-205ENST00000419442 USP17L18D6R9N7 530 aa13.02□□□□□ -0.33
RAPGEF1-205ENST00000419442 USP17L22D6RA61 530 aa13.02□□□□□ -0.33
RAPGEF1-205ENST00000419442 USP17L17D6RBQ6 530 aa13.02□□□□□ -0.33
RAPGEF1-205ENST00000419442 USP17L19D6RCP7 530 aa13.02□□□□□ -0.33
RAPGEF1-205ENST00000419442 USP17L20D6RJB6 530 aa13.02□□□□□ -0.33
RAPGEF1-205ENST00000419442 BMP1P13497 986 aa13.02□□□□□ -0.33
RAPGEF1-205ENST00000419442 USP17L24Q0WX57 530 aa13.02□□□□□ -0.33
RAPGEF1-205ENST00000419442 ADGRE1Q14246 886 aa13.02□□□□□ -0.33
RAPGEF1-205ENST00000419442 RASIP1Q5U651 963 aa13.02□□□□□ -0.33
RAPGEF1-205ENST00000419442 PPM1EQ8WY54 764 aa13.02□□□□□ -0.33
RAPGEF1-205ENST00000419442 NSUN4Q96CB9 384 aaKnown RBP13.02□□□□□ -0.33
RAPGEF1-205ENST00000419442 DHX36Q9H2U1 1008 aaKnown RBP13.02□□□□□ -0.33
RAPGEF1-205ENST00000419442 IVNS1ABPQ9Y6Y0 642 aa13.02□□□□□ -0.33
RAPGEF1-205ENST00000419442 ZNFX1Q9P2E3 1918 aaKnown RBP13.01□□□□□ -0.33
RAPGEF1-205ENST00000419442 RAG1P15918 1043 aa13.01□□□□□ -0.33
RAPGEF1-205ENST00000419442 IL15P40933 162 aaPredicted RBP13.01□□□□□ -0.33
RAPGEF1-205ENST00000419442 GSTO1P78417 241 aa13.01□□□□□ -0.33
RAPGEF1-205ENST00000419442 ANO1Q5XXA6 986 aa13.01□□□□□ -0.33
RAPGEF1-205ENST00000419442 CATSPERGQ6ZRH7 1159 aa13.01□□□□□ -0.33
RAPGEF1-205ENST00000419442 FOXP4Q8IVH2 680 aaPredicted RBP13.01□□□□□ -0.33
RAPGEF1-205ENST00000419442 TEX11Q8IYF3 940 aa13.01□□□□□ -0.33
RAPGEF1-205ENST00000419442 FERMT2Q96AC1 680 aa13.01□□□□□ -0.33
RAPGEF1-205ENST00000419442 LRFN3Q9BTN0 628 aa13.01□□□□□ -0.33
RAPGEF1-205ENST00000419442 PBX4Q9BYU1 374 aa13.01□□□□□ -0.33
RAPGEF1-205ENST00000419442 PRDM12Q9H4Q4 367 aa13.01□□□□□ -0.33
RAPGEF1-205ENST00000419442 CXXC1Q9P0U4 656 aaPredicted RBP13.01□□□□□ -0.33
RAPGEF1-205ENST00000419442 BTBD7Q9P203 1132 aa13.01□□□□□ -0.33
RAPGEF1-205ENST00000419442 HCN4Q9Y3Q4 1203 aa13.01□□□□□ -0.33
RAPGEF1-205ENST00000419442 FAM47AQ5JRC9 791 aa13□□□□□ -0.33
RAPGEF1-205ENST00000419442 WDR78Q5VTH9 848 aa13□□□□□ -0.33
RAPGEF1-205ENST00000419442 IL27Q8NEV9 243 aa13□□□□□ -0.33
RAPGEF1-205ENST00000419442 NECAB3Q96P71 396 aaPredicted RBP13□□□□□ -0.33
RAPGEF1-205ENST00000419442 SIL1Q9H173 461 aa13□□□□□ -0.33
RAPGEF1-205ENST00000419442 ROBO3Q96MS0 1386 aa12.99□□□□□ -0.33
RAPGEF1-205ENST00000419442 STRNO43815 780 aa12.99□□□□□ -0.33
RAPGEF1-205ENST00000419442 GDF11O95390 407 aa12.99□□□□□ -0.33
RAPGEF1-205ENST00000419442 PBX2P40425 430 aa12.99□□□□□ -0.33
RAPGEF1-205ENST00000419442 ANKRD33Q7Z3H0 272 aa12.99□□□□□ -0.33
RAPGEF1-205ENST00000419442 SH3RF3Q8TEJ3 882 aaPredicted RBP12.99□□□□□ -0.33
RAPGEF1-205ENST00000419442 TOX2Q96NM4 488 aa12.99□□□□□ -0.33
RAPGEF1-205ENST00000419442 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.99□□□□□ -0.333e-9■■■□□ 17.6
RAPGEF1-205ENST00000419442 MYH1P12882 1939 aa12.99□□□□□ -0.33
RAPGEF1-205ENST00000419442 PTPRCP08575 1304 aa12.98□□□□□ -0.33
RAPGEF1-205ENST00000419442 SPDYE16A6NNV3 312 aaPredicted RBP12.98□□□□□ -0.33
RAPGEF1-205ENST00000419442 ADORA2AP29274 412 aa12.98□□□□□ -0.33
RAPGEF1-205ENST00000419442 FAAP100Q0VG06 881 aa12.98□□□□□ -0.33
RAPGEF1-205ENST00000419442 DPP9Q86TI2 863 aa12.98□□□□□ -0.33
RAPGEF1-205ENST00000419442 MRPL50Q8N5N7 158 aaKnown RBP12.98□□□□□ -0.33
RAPGEF1-205ENST00000419442 COPRSQ9NQ92 184 aa12.98□□□□□ -0.33
RAPGEF1-205ENST00000419442 HMG20BQ9P0W2 317 aa12.98□□□□□ -0.33
RAPGEF1-205ENST00000419442 GRXCR1A8MXD5 290 aa12.97□□□□□ -0.33
RAPGEF1-205ENST00000419442 COBLO75128 1261 aa12.97□□□□□ -0.33
RAPGEF1-205ENST00000419442 VCAM1P19320 739 aa12.97□□□□□ -0.33
RAPGEF1-205ENST00000419442 PPP4CP60510 307 aa12.97□□□□□ -0.33
RAPGEF1-205ENST00000419442 TIMM10P62072 90 aa12.97□□□□□ -0.33
RAPGEF1-205ENST00000419442 MVPQ14764 893 aaKnown RBP12.97□□□□□ -0.33
RAPGEF1-205ENST00000419442 CCDC85BQ15834 202 aaPredicted RBP12.97□□□□□ -0.33
RAPGEF1-205ENST00000419442 CCDC184Q52MB2 194 aa12.97□□□□□ -0.33
RAPGEF1-205ENST00000419442 TMEM240Q5SV17 173 aa12.97□□□□□ -0.33
RAPGEF1-205ENST00000419442 C16orf59Q7L2K0 433 aa12.97□□□□□ -0.33
RAPGEF1-205ENST00000419442 SLC44A5Q8NCS7 719 aa12.97□□□□□ -0.33
RAPGEF1-205ENST00000419442 SHCBP1Q8NEM2 672 aa12.97□□□□□ -0.33
RAPGEF1-205ENST00000419442 XAGE2Q96GT9 111 aa12.97□□□□□ -0.33
RAPGEF1-205ENST00000419442 KIAA1683Q9H0B3 1180 aa12.97□□□□□ -0.33
RAPGEF1-205ENST00000419442 EPHX3Q9H6B9 360 aa12.97□□□□□ -0.33
RAPGEF1-205ENST00000419442 TMEM39AQ9NV64 488 aa12.97□□□□□ -0.33
RAPGEF1-205ENST00000419442 NRBP1Q9UHY1 535 aa12.97□□□□□ -0.33
RAPGEF1-205ENST00000419442 TBX21Q9UL17 535 aa12.97□□□□□ -0.33
RAPGEF1-205ENST00000419442 CHD9Q3L8U1 2897 aa12.97□□□□□ -0.33
RAPGEF1-205ENST00000419442 PARP14Q460N5 1801 aa12.97□□□□□ -0.33
RAPGEF1-205ENST00000419442 MUC6Q6W4X9 2439 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms