RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 CT47A1Q5JQC4 288 aaPredicted RBP16.7■□□□□ 0.26
HLA-DPA1-242ENST00000419277 SMIM5Q71RC9 77 aa16.7■□□□□ 0.26
HLA-DPA1-242ENST00000419277 TRIML1Q8N9V2 468 aa16.7■□□□□ 0.26
HLA-DPA1-242ENST00000419277 RTFDC1Q9BY42 306 aaPredicted RBP16.7■□□□□ 0.26
HLA-DPA1-242ENST00000419277 KAT14Q9H8E8 782 aa16.7■□□□□ 0.26
HLA-DPA1-242ENST00000419277 TRIM75PA6NK02 468 aa16.7■□□□□ 0.26
HLA-DPA1-242ENST00000419277 PKN1Q16512 942 aa16.7■□□□□ 0.26
HLA-DPA1-242ENST00000419277 TXNRD1Q16881 649 aa16.7■□□□□ 0.26
HLA-DPA1-242ENST00000419277 ZNF772Q68DY9 489 aaPredicted RBP16.7■□□□□ 0.26
HLA-DPA1-242ENST00000419277 SHC4Q6S5L8 630 aa16.7■□□□□ 0.26
HLA-DPA1-242ENST00000419277 COA1Q9GZY4 146 aa16.7■□□□□ 0.26
HLA-DPA1-242ENST00000419277 SPTLC3Q9NUV7 552 aa16.7■□□□□ 0.26
HLA-DPA1-242ENST00000419277 DACH1Q9UI36 760 aa16.7■□□□□ 0.26
HLA-DPA1-242ENST00000419277 KCNH3Q9ULD8 1083 aa16.7■□□□□ 0.26
HLA-DPA1-242ENST00000419277 MYO3BQ8WXR4 1341 aa16.69■□□□□ 0.26
HLA-DPA1-242ENST00000419277 SCG2P13521 617 aa16.69■□□□□ 0.26
HLA-DPA1-242ENST00000419277 ALDH1B1P30837 517 aa16.69■□□□□ 0.26
HLA-DPA1-242ENST00000419277 GUCY1A2P33402 732 aa16.69■□□□□ 0.26
HLA-DPA1-242ENST00000419277 PFKFB3Q16875 520 aaPredicted RBP16.69■□□□□ 0.26
HLA-DPA1-242ENST00000419277 C11orf57Q6ZUT1 292 aaPredicted RBP16.69■□□□□ 0.26
HLA-DPA1-242ENST00000419277 CCDC148Q8NFR7 591 aa16.69■□□□□ 0.26
HLA-DPA1-242ENST00000419277 TMX4Q9H1E5 349 aaPredicted RBP16.69■□□□□ 0.26
HLA-DPA1-242ENST00000419277 PLIN4Q96Q06 1357 aa16.69■□□□□ 0.26
HLA-DPA1-242ENST00000419277 NPR1P16066 1061 aa16.68■□□□□ 0.26
HLA-DPA1-242ENST00000419277 SMARCA1P28370 1054 aa16.68■□□□□ 0.26
HLA-DPA1-242ENST00000419277 MARCKSP29966 332 aaPredicted RBP16.68■□□□□ 0.26
HLA-DPA1-242ENST00000419277 DHX40Q8IX18 779 aaKnown RBP16.68■□□□□ 0.26
HLA-DPA1-242ENST00000419277 TBC1D16Q8TBP0 767 aa16.68■□□□□ 0.26
HLA-DPA1-242ENST00000419277 MKNK2Q9HBH9 465 aa16.68■□□□□ 0.26
HLA-DPA1-242ENST00000419277 FBXO2Q9UK22 296 aaPredicted RBP16.68■□□□□ 0.26
HLA-DPA1-242ENST00000419277 ATP6V0A2Q9Y487 856 aa16.68■□□□□ 0.26
HLA-DPA1-242ENST00000419277 MYH8P13535 1937 aa16.68■□□□□ 0.26
HLA-DPA1-242ENST00000419277 CYP2D7A0A087X1C5 515 aa16.67■□□□□ 0.26
HLA-DPA1-242ENST00000419277 PPEF1O14829 653 aaPredicted RBP16.67■□□□□ 0.26
HLA-DPA1-242ENST00000419277 PRDM1O75626 825 aa16.67■□□□□ 0.26
HLA-DPA1-242ENST00000419277 PDE6BP35913 854 aa16.67■□□□□ 0.26
HLA-DPA1-242ENST00000419277 GSDMDP57764 484 aa16.67■□□□□ 0.26
HLA-DPA1-242ENST00000419277 DDR1Q08345 913 aa16.67■□□□□ 0.26
HLA-DPA1-242ENST00000419277 PPP4R3BQ5MIZ7 849 aa16.67■□□□□ 0.26
HLA-DPA1-242ENST00000419277 KRBA2Q6ZNG9 492 aa16.67■□□□□ 0.26
HLA-DPA1-242ENST00000419277 ZNF444Q8N0Y2 327 aaPredicted RBP16.67■□□□□ 0.26
HLA-DPA1-242ENST00000419277 CCDC24Q8N4L8 307 aa16.67■□□□□ 0.26
HLA-DPA1-242ENST00000419277 CNNM3Q8NE01 707 aa16.67■□□□□ 0.26
HLA-DPA1-242ENST00000419277 IMPACTQ9P2X3 320 aa16.67■□□□□ 0.26
HLA-DPA1-242ENST00000419277 AP5Z1O43299 807 aa16.67■□□□□ 0.26
HLA-DPA1-242ENST00000419277 TSPY3P0CV98 308 aa16.67■□□□□ 0.26
HLA-DPA1-242ENST00000419277 TSPY8P0CW00 308 aa16.67■□□□□ 0.26
HLA-DPA1-242ENST00000419277 TOB1P50616 345 aaPredicted RBP16.67■□□□□ 0.26
HLA-DPA1-242ENST00000419277 GRM4Q14833 912 aa16.67■□□□□ 0.26
HLA-DPA1-242ENST00000419277 MFSD14BQ5SR56 506 aa16.67■□□□□ 0.26
HLA-DPA1-242ENST00000419277 NT5DC1Q5TFE4 455 aa16.67■□□□□ 0.26
HLA-DPA1-242ENST00000419277 RCSD1Q6JBY9 416 aa16.67■□□□□ 0.26
HLA-DPA1-242ENST00000419277 C16orf86Q6ZW13 317 aa16.67■□□□□ 0.26
HLA-DPA1-242ENST00000419277 DRC7Q8IY82 874 aa16.67■□□□□ 0.26
HLA-DPA1-242ENST00000419277 PNMA1Q8ND90 353 aa16.67■□□□□ 0.26
HLA-DPA1-242ENST00000419277 CCDC12Q8WUD4 166 aaPredicted RBP16.67■□□□□ 0.26
HLA-DPA1-242ENST00000419277 CLIP2Q9UDT6 1046 aa16.67■□□□□ 0.26
HLA-DPA1-242ENST00000419277 KCNJ14Q9UNX9 436 aa16.67■□□□□ 0.26
HLA-DPA1-242ENST00000419277 hCG_1984214I3L0E3 225 aa16.66■□□□□ 0.26
HLA-DPA1-242ENST00000419277 BTDP43251 543 aa16.66■□□□□ 0.26
HLA-DPA1-242ENST00000419277 TFAP4Q01664 338 aa16.66■□□□□ 0.26
HLA-DPA1-242ENST00000419277 STK11IPQ8N1F8 1099 aa16.66■□□□□ 0.26
HLA-DPA1-242ENST00000419277 ZNF713Q8N859 430 aaPredicted RBP16.66■□□□□ 0.26
HLA-DPA1-242ENST00000419277 SH3RF3Q8TEJ3 882 aaPredicted RBP16.66■□□□□ 0.26
HLA-DPA1-242ENST00000419277 NAP1L5Q96NT1 182 aaPredicted RBP16.66■□□□□ 0.26
HLA-DPA1-242ENST00000419277 V9GY48 417 aaPredicted RBP16.66■□□□□ 0.26
HLA-DPA1-242ENST00000419277 TRIM37O94972 964 aa16.65■□□□□ 0.26
HLA-DPA1-242ENST00000419277 PLEKHA8P1O95397 391 aa16.65■□□□□ 0.26
HLA-DPA1-242ENST00000419277 ARL6IP4Q66PJ3 421 aaKnown RBP16.65■□□□□ 0.26
HLA-DPA1-242ENST00000419277 OLFM4Q6UX06 510 aa16.65■□□□□ 0.26
HLA-DPA1-242ENST00000419277 DAGLBQ8NCG7 672 aa16.65■□□□□ 0.26
HLA-DPA1-242ENST00000419277 KIAA1524Q8TCG1 905 aa16.65■□□□□ 0.26
HLA-DPA1-242ENST00000419277 TNFRSF25Q93038 417 aa16.65■□□□□ 0.26
HLA-DPA1-242ENST00000419277 NRDCO43847 1150 aa16.65■□□□□ 0.26
HLA-DPA1-242ENST00000419277 USP17L8P0C7I0 530 aa16.65■□□□□ 0.26
HLA-DPA1-242ENST00000419277 NR5A1Q13285 461 aa16.65■□□□□ 0.26
HLA-DPA1-242ENST00000419277 NOLC1Q14978 699 aaKnown RBP eCLIP16.65■□□□□ 0.26
HLA-DPA1-242ENST00000419277 DPCR1Q3MIW9 517 aa16.65■□□□□ 0.26
HLA-DPA1-242ENST00000419277 TEX11Q8IYF3 940 aa16.65■□□□□ 0.26
HLA-DPA1-242ENST00000419277 AOPEPQ8N6M6 819 aa16.65■□□□□ 0.26
HLA-DPA1-242ENST00000419277 PRIMPOLQ96LW4 560 aa16.65■□□□□ 0.26
HLA-DPA1-242ENST00000419277 EYA3Q99504 573 aa16.65■□□□□ 0.26
HLA-DPA1-242ENST00000419277 CABP5Q9NP86 173 aa16.65■□□□□ 0.26
HLA-DPA1-242ENST00000419277 VPS54Q9P1Q0 977 aa16.65■□□□□ 0.26
HLA-DPA1-242ENST00000419277 FLT1P17948 1338 aa16.64■□□□□ 0.25
HLA-DPA1-242ENST00000419277 COL11A2P13942 1736 aaPredicted RBP16.64■□□□□ 0.25
HLA-DPA1-242ENST00000419277 TNS1Q9HBL0 1735 aaKnown RBP16.64■□□□□ 0.25
HLA-DPA1-242ENST00000419277 SNED1Q8TER0 1413 aa16.64■□□□□ 0.25
HLA-DPA1-242ENST00000419277 MYL5Q02045 173 aa16.64■□□□□ 0.25
HLA-DPA1-242ENST00000419277 SEMA3FQ13275 785 aa16.64■□□□□ 0.25
HLA-DPA1-242ENST00000419277 ORC2Q13416 577 aaPredicted RBP16.64■□□□□ 0.25
HLA-DPA1-242ENST00000419277 CCDC82Q8N4S0 544 aa16.64■□□□□ 0.25
HLA-DPA1-242ENST00000419277 SRBD1Q8N5C6 995 aaKnown RBP16.64■□□□□ 0.25
HLA-DPA1-242ENST00000419277 NEDD1Q8NHV4 660 aa16.64■□□□□ 0.25
HLA-DPA1-242ENST00000419277 TGFBRAP1Q8WUH2 860 aa16.64■□□□□ 0.25
HLA-DPA1-242ENST00000419277 AKT1S1Q96B36 256 aa16.64■□□□□ 0.25
HLA-DPA1-242ENST00000419277 SPZ1Q9BXG8 430 aa16.64■□□□□ 0.25
HLA-DPA1-242ENST00000419277 LAD1O00515 517 aa16.63■□□□□ 0.25
HLA-DPA1-242ENST00000419277 CBFA2T2O43439 604 aa16.63■□□□□ 0.25
HLA-DPA1-242ENST00000419277 SMC2O95347 1197 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms