RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 MINDY4BA8MYZ0 360 aa5.89□□□□□ -1.47
HMGB3P20-201ENST00000417997 H3BS24 57 aa5.89□□□□□ -1.47
HMGB3P20-201ENST00000417997 PF4P02776 101 aa5.89□□□□□ -1.47
HMGB3P20-201ENST00000417997 ITGB5P18084 799 aa5.89□□□□□ -1.47
HMGB3P20-201ENST00000417997 CYP7A1P22680 504 aa5.89□□□□□ -1.47
HMGB3P20-201ENST00000417997 CAP2P40123 477 aa5.89□□□□□ -1.47
HMGB3P20-201ENST00000417997 CAMK2GQ13555 558 aaPredicted RBP5.89□□□□□ -1.47
HMGB3P20-201ENST00000417997 ZNF746Q6NUN9 644 aaPredicted RBP5.89□□□□□ -1.47
HMGB3P20-201ENST00000417997 LRRN4CLQ8ND94 238 aa5.89□□□□□ -1.47
HMGB3P20-201ENST00000417997 GIPC2Q8TF65 315 aa5.89□□□□□ -1.47
HMGB3P20-201ENST00000417997 HSPA12BQ96MM6 686 aa5.89□□□□□ -1.47
HMGB3P20-201ENST00000417997 FMNL2Q96PY5 1086 aa5.89□□□□□ -1.47
HMGB3P20-201ENST00000417997 TACC3Q9Y6A5 838 aa5.89□□□□□ -1.47
HMGB3P20-201ENST00000417997 CNTNAP4Q9C0A0 1308 aa5.89□□□□□ -1.47
HMGB3P20-201ENST00000417997 PRXQ9BXM0 1461 aa5.89□□□□□ -1.47
HMGB3P20-201ENST00000417997 PLCG1P19174 1290 aa5.88□□□□□ -1.47
HMGB3P20-201ENST00000417997 FAM160A1Q05DH4 1040 aa5.88□□□□□ -1.47
HMGB3P20-201ENST00000417997 SNAP47Q5SQN1 464 aa5.88□□□□□ -1.47
HMGB3P20-201ENST00000417997 SLC23A3Q6PIS1 610 aa5.88□□□□□ -1.47
HMGB3P20-201ENST00000417997 TMEM74Q96NL1 305 aa5.88□□□□□ -1.47
HMGB3P20-201ENST00000417997 ATP13A1Q9HD20 1204 aa5.88□□□□□ -1.47
HMGB3P20-201ENST00000417997 CORINQ9Y5Q5 1042 aa5.88□□□□□ -1.47
HMGB3P20-201ENST00000417997 PITPNM2Q9BZ72 1349 aa5.88□□□□□ -1.47
HMGB3P20-201ENST00000417997 GAPVD1Q14C86 1478 aa5.88□□□□□ -1.47
HMGB3P20-201ENST00000417997 IFT140Q96RY7 1462 aa5.88□□□□□ -1.47
HMGB3P20-201ENST00000417997 ADAMTS12P58397 1594 aa5.88□□□□□ -1.47
HMGB3P20-201ENST00000417997 RBAK-RBAKDNI3L0D1 243 aa5.87□□□□□ -1.47
HMGB3P20-201ENST00000417997 PAPLNO95428 1278 aa5.87□□□□□ -1.47
HMGB3P20-201ENST00000417997 F13A1P00488 732 aa5.87□□□□□ -1.47
HMGB3P20-201ENST00000417997 ETV3P41162 512 aa5.87□□□□□ -1.47
HMGB3P20-201ENST00000417997 LMNB2Q03252 620 aa5.87□□□□□ -1.47
HMGB3P20-201ENST00000417997 PWP1Q13610 501 aa5.87□□□□□ -1.47
HMGB3P20-201ENST00000417997 ZNF326Q5BKZ1 582 aaKnown RBP5.87□□□□□ -1.47
HMGB3P20-201ENST00000417997 SLC6A19Q695T7 634 aa5.87□□□□□ -1.47
HMGB3P20-201ENST00000417997 MRPL41Q8IXM3 137 aaKnown RBP5.87□□□□□ -1.47
HMGB3P20-201ENST00000417997 FAM13CQ8NE31 585 aa5.87□□□□□ -1.47
HMGB3P20-201ENST00000417997 ACSF2Q96CM8 615 aaPredicted RBP5.87□□□□□ -1.47
HMGB3P20-201ENST00000417997 BCL11AQ9H165 835 aa5.87□□□□□ -1.47
HMGB3P20-201ENST00000417997 CARS2Q9HA77 564 aaKnown RBP5.87□□□□□ -1.47
HMGB3P20-201ENST00000417997 GOLGA2P5Q9HBQ8 144 aa5.87□□□□□ -1.47
HMGB3P20-201ENST00000417997 GRIN3BO60391 1043 aa5.86□□□□□ -1.47
HMGB3P20-201ENST00000417997 CILPO75339 1184 aa5.86□□□□□ -1.47
HMGB3P20-201ENST00000417997 ATG4DQ86TL0 474 aaPredicted RBP5.86□□□□□ -1.47
HMGB3P20-201ENST00000417997 CCDC84Q86UT8 332 aaPredicted RBP5.86□□□□□ -1.47
HMGB3P20-201ENST00000417997 MCATQ8IVS2 390 aaKnown RBP5.86□□□□□ -1.47
HMGB3P20-201ENST00000417997 UBE2FQ969M7 185 aa5.86□□□□□ -1.47
HMGB3P20-201ENST00000417997 ZSWIM5Q9P217 1185 aa5.86□□□□□ -1.47
HMGB3P20-201ENST00000417997 KLHL3Q9UH77 587 aa5.86□□□□□ -1.47
HMGB3P20-201ENST00000417997 ADAM30Q9UKF2 790 aa5.86□□□□□ -1.47
HMGB3P20-201ENST00000417997 CAPN6Q9Y6Q1 641 aa5.86□□□□□ -1.47
HMGB3P20-201ENST00000417997 CARMIL1Q5VZK9 1371 aa5.85□□□□□ -1.47
HMGB3P20-201ENST00000417997 UPK3BL1B0FP48 263 aa5.85□□□□□ -1.47
HMGB3P20-201ENST00000417997 UPK3BL2E5RIL1 263 aa5.85□□□□□ -1.47
HMGB3P20-201ENST00000417997 TLR3O15455 904 aaKnown RBP5.85□□□□□ -1.47
HMGB3P20-201ENST00000417997 ZNF865P0CJ78 1059 aaPredicted RBP5.85□□□□□ -1.47
HMGB3P20-201ENST00000417997 TNNI2P48788 182 aa5.85□□□□□ -1.47
HMGB3P20-201ENST00000417997 YARSP54577 528 aaKnown RBP5.85□□□□□ -1.47
HMGB3P20-201ENST00000417997 OGFOD2Q6N063 350 aa5.85□□□□□ -1.47
HMGB3P20-201ENST00000417997 GOLM1Q8NBJ4 401 aa5.85□□□□□ -1.47
HMGB3P20-201ENST00000417997 GATAD2BQ8WXI9 593 aa5.85□□□□□ -1.47
HMGB3P20-201ENST00000417997 FAM168AQ92567 244 aa5.85□□□□□ -1.47
HMGB3P20-201ENST00000417997 RSRP1Q9BUV0 290 aa5.85□□□□□ -1.47
HMGB3P20-201ENST00000417997 KBTBD4Q9NVX7 518 aa5.85□□□□□ -1.47
HMGB3P20-201ENST00000417997 GRIN2BQ13224 1484 aa5.84□□□□□ -1.47
HMGB3P20-201ENST00000417997 CLIP1P30622 1438 aa5.84□□□□□ -1.47
HMGB3P20-201ENST00000417997 ZBTB7CA1YPR0 619 aa5.84□□□□□ -1.47
HMGB3P20-201ENST00000417997 FAM221AA4D161 298 aa5.84□□□□□ -1.47
HMGB3P20-201ENST00000417997 KIR3DL1P43629 444 aa5.84□□□□□ -1.47
HMGB3P20-201ENST00000417997 C22orf34Q6ZV56 151 aa5.84□□□□□ -1.47
HMGB3P20-201ENST00000417997 COX4I2Q96KJ9 171 aa5.84□□□□□ -1.47
HMGB3P20-201ENST00000417997 RHOVQ96L33 236 aa5.84□□□□□ -1.47
HMGB3P20-201ENST00000417997 COPRSQ9NQ92 184 aa5.84□□□□□ -1.47
HMGB3P20-201ENST00000417997 SEMA3GQ9NS98 782 aa5.84□□□□□ -1.47
HMGB3P20-201ENST00000417997 TDRD9Q8NDG6 1382 aaKnown RBP5.83□□□□□ -1.48
HMGB3P20-201ENST00000417997 CHMP4BP1P59074 171 aa5.83□□□□□ -1.48
HMGB3P20-201ENST00000417997 TNK2Q07912 1038 aa5.83□□□□□ -1.48
HMGB3P20-201ENST00000417997 TMCO4Q5TGY1 634 aa5.83□□□□□ -1.48
HMGB3P20-201ENST00000417997 DNAJB8Q8NHS0 232 aa5.83□□□□□ -1.48
HMGB3P20-201ENST00000417997 FBXO27Q8NI29 283 aa5.83□□□□□ -1.48
HMGB3P20-201ENST00000417997 CYB5D2Q8WUJ1 264 aa5.83□□□□□ -1.48
HMGB3P20-201ENST00000417997 KRTAP4-12Q9BQ66 201 aa5.83□□□□□ -1.48
HMGB3P20-201ENST00000417997 LMCD1Q9NZU5 365 aa5.83□□□□□ -1.48
HMGB3P20-201ENST00000417997 REV1Q9UBZ9 1251 aa5.83□□□□□ -1.48
HMGB3P20-201ENST00000417997 GGT7Q9UJ14 662 aa5.83□□□□□ -1.48
HMGB3P20-201ENST00000417997 CEP131Q9UPN4 1083 aa5.83□□□□□ -1.48
HMGB3P20-201ENST00000417997 ST14Q9Y5Y6 855 aa5.83□□□□□ -1.48
HMGB3P20-201ENST00000417997 HTR3BO95264 441 aa5.82□□□□□ -1.48
HMGB3P20-201ENST00000417997 THAP5Q7Z6K1 395 aa5.82□□□□□ -1.48
HMGB3P20-201ENST00000417997 SLAMF8Q9P0V8 285 aa5.82□□□□□ -1.48
HMGB3P20-201ENST00000417997 EFCAB5A4FU69 1503 aa5.82□□□□□ -1.48
HMGB3P20-201ENST00000417997 ZNF608Q9ULD9 1512 aaPredicted RBP5.82□□□□□ -1.48
HMGB3P20-201ENST00000417997 SNAPC4Q5SXM2 1469 aa5.82□□□□□ -1.48
HMGB3P20-201ENST00000417997 CARMIL2Q6F5E8 1435 aa5.82□□□□□ -1.48
HMGB3P20-201ENST00000417997 CHURC1-FNTBB4DL54 471 aa5.81□□□□□ -1.48
HMGB3P20-201ENST00000417997 YBX3P16989 372 aaKnown RBP eCLIP5.81□□□□□ -1.48
HMGB3P20-201ENST00000417997 RANGAP1P46060 587 aaPredicted RBP5.81□□□□□ -1.48
HMGB3P20-201ENST00000417997 MLECQ14165 292 aa5.81□□□□□ -1.48
HMGB3P20-201ENST00000417997 KCNMB1Q16558 191 aa5.81□□□□□ -1.48
HMGB3P20-201ENST00000417997 CWF19L2Q2TBE0 894 aaKnown RBP5.81□□□□□ -1.48
HMGB3P20-201ENST00000417997 TMEM201Q5SNT2 666 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms