RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 PTPREP23469 700 aa9.62□□□□□ -0.87
HLA-DPA1-241ENST00000417724 RARSP54136 660 aaKnown RBP9.62□□□□□ -0.87
HLA-DPA1-241ENST00000417724 USP14P54578 494 aa9.62□□□□□ -0.87
HLA-DPA1-241ENST00000417724 SHROOM1Q2M3G4 852 aaPredicted RBP9.62□□□□□ -0.87
HLA-DPA1-241ENST00000417724 ZNF697Q5TEC3 545 aa9.62□□□□□ -0.87
HLA-DPA1-241ENST00000417724 POTEEQ6S8J3 1075 aa9.62□□□□□ -0.87
HLA-DPA1-241ENST00000417724 CATSPERGQ6ZRH7 1159 aa9.62□□□□□ -0.87
HLA-DPA1-241ENST00000417724 ADGRA1Q86SQ6 560 aa9.62□□□□□ -0.87
HLA-DPA1-241ENST00000417724 CERS3Q8IU89 383 aa9.62□□□□□ -0.87
HLA-DPA1-241ENST00000417724 ARRDC4Q8NCT1 418 aa9.62□□□□□ -0.87
HLA-DPA1-241ENST00000417724 C12orf42Q96LP6 360 aa9.62□□□□□ -0.87
HLA-DPA1-241ENST00000417724 GUCD1Q96NT3 240 aa9.62□□□□□ -0.87
HLA-DPA1-241ENST00000417724 NDUFB9Q9Y6M9 179 aa9.62□□□□□ -0.87
HLA-DPA1-241ENST00000417724 MYH1P12882 1939 aa9.62□□□□□ -0.87
HLA-DPA1-241ENST00000417724 FRMPD3Q5JV73 1810 aa9.61□□□□□ -0.87
HLA-DPA1-241ENST00000417724 PNMA6EA0A0J9YXQ4 647 aa9.61□□□□□ -0.87
HLA-DPA1-241ENST00000417724 CYP2E1P05181 493 aaPredicted RBP9.61□□□□□ -0.87
HLA-DPA1-241ENST00000417724 CYP7A1P22680 504 aa9.61□□□□□ -0.87
HLA-DPA1-241ENST00000417724 ATN1P54259 1190 aaPredicted RBP9.61□□□□□ -0.87
HLA-DPA1-241ENST00000417724 OS9Q13438 667 aaPredicted RBP9.61□□□□□ -0.87
HLA-DPA1-241ENST00000417724 ZYXQ15942 572 aaKnown RBP9.61□□□□□ -0.87
HLA-DPA1-241ENST00000417724 TATDN1Q6P1N9 297 aa9.61□□□□□ -0.87
HLA-DPA1-241ENST00000417724 LBX2Q6XYB7 198 aa9.61□□□□□ -0.87
HLA-DPA1-241ENST00000417724 ZNF512BQ96KM6 892 aaPredicted RBP9.61□□□□□ -0.87
HLA-DPA1-241ENST00000417724 FAM161BQ96MY7 647 aa9.61□□□□□ -0.87
HLA-DPA1-241ENST00000417724 KIAA1683Q9H0B3 1180 aa9.61□□□□□ -0.87
HLA-DPA1-241ENST00000417724 CABP5Q9NP86 173 aa9.61□□□□□ -0.87
HLA-DPA1-241ENST00000417724 FLRT1Q9NZU1 646 aa9.61□□□□□ -0.87
HLA-DPA1-241ENST00000417724 SERPINB13Q9UIV8 391 aa9.61□□□□□ -0.87
HLA-DPA1-241ENST00000417724 MYO5AQ9Y4I1 1855 aaKnown RBP9.61□□□□□ -0.87
HLA-DPA1-241ENST00000417724 STRNO43815 780 aa9.6□□□□□ -0.87
HLA-DPA1-241ENST00000417724 CNMDO75829 334 aa9.6□□□□□ -0.87
HLA-DPA1-241ENST00000417724 VCAM1P19320 739 aa9.6□□□□□ -0.87
HLA-DPA1-241ENST00000417724 CYP2C19P33261 490 aa9.6□□□□□ -0.87
HLA-DPA1-241ENST00000417724 USP5P45974 858 aa9.6□□□□□ -0.87
HLA-DPA1-241ENST00000417724 RTP1P59025 263 aa9.6□□□□□ -0.87
HLA-DPA1-241ENST00000417724 DYNLL1P63167 89 aaKnown RBP9.6□□□□□ -0.87
HLA-DPA1-241ENST00000417724 GRB14Q14449 540 aa9.6□□□□□ -0.87
HLA-DPA1-241ENST00000417724 RAB3GAP1Q15042 981 aa9.6□□□□□ -0.87
HLA-DPA1-241ENST00000417724 ABCB5Q2M3G0 1257 aa9.6□□□□□ -0.87
HLA-DPA1-241ENST00000417724 CERKLQ49MI3 558 aaPredicted RBP9.6□□□□□ -0.87
HLA-DPA1-241ENST00000417724 TNNI3KQ59H18 835 aa9.6□□□□□ -0.87
HLA-DPA1-241ENST00000417724 DPP9Q86TI2 863 aa9.6□□□□□ -0.87
HLA-DPA1-241ENST00000417724 TTC6Q86TZ1 520 aa9.6□□□□□ -0.87
HLA-DPA1-241ENST00000417724 DBNDD2Q9BQY9 259 aa9.6□□□□□ -0.87
HLA-DPA1-241ENST00000417724 EHD4Q9H223 541 aa9.6□□□□□ -0.87
HLA-DPA1-241ENST00000417724 HOXC10Q9NYD6 342 aa9.6□□□□□ -0.87
HLA-DPA1-241ENST00000417724 FPGT-TNNI3KV9GXZ4 949 aa9.6□□□□□ -0.87
HLA-DPA1-241ENST00000417724 MAST2Q6P0Q8 1798 aa9.6□□□□□ -0.87
HLA-DPA1-241ENST00000417724 KBTBD13C9JR72 458 aa9.59□□□□□ -0.87
HLA-DPA1-241ENST00000417724 IDH1O75874 414 aaKnown RBP9.59□□□□□ -0.87
HLA-DPA1-241ENST00000417724 ZAP70P43403 619 aa9.59□□□□□ -0.87
HLA-DPA1-241ENST00000417724 COG2Q14746 738 aa9.59□□□□□ -0.87
HLA-DPA1-241ENST00000417724 SHHQ15465 462 aa9.59□□□□□ -0.87
HLA-DPA1-241ENST00000417724 TMED8Q6PL24 325 aaPredicted RBP9.59□□□□□ -0.87
HLA-DPA1-241ENST00000417724 SLC39A5Q6ZMH5 540 aa9.59□□□□□ -0.87
HLA-DPA1-241ENST00000417724 NPLOC4Q8TAT6 608 aa9.59□□□□□ -0.87
HLA-DPA1-241ENST00000417724 CDX2Q99626 313 aaPredicted RBP9.59□□□□□ -0.87
HLA-DPA1-241ENST00000417724 SEMA6BQ9H3T3 888 aa9.59□□□□□ -0.87
HLA-DPA1-241ENST00000417724 PIH1D3Q9NQM4 214 aaKnown RBP9.59□□□□□ -0.87
HLA-DPA1-241ENST00000417724 SLC5A4Q9NY91 659 aa9.59□□□□□ -0.87
HLA-DPA1-241ENST00000417724 BTBD7Q9P203 1132 aa9.59□□□□□ -0.87
HLA-DPA1-241ENST00000417724 ATP11BQ9Y2G3 1177 aa9.59□□□□□ -0.87
HLA-DPA1-241ENST00000417724 SPDYE16A6NNV3 312 aaPredicted RBP9.58□□□□□ -0.88
HLA-DPA1-241ENST00000417724 SURF6O75683 361 aaKnown RBP9.58□□□□□ -0.88
HLA-DPA1-241ENST00000417724 IGHA2P01877 340 aa9.58□□□□□ -0.88
HLA-DPA1-241ENST00000417724 CYBAP13498 195 aa9.58□□□□□ -0.88
HLA-DPA1-241ENST00000417724 TRIM27P14373 513 aa9.58□□□□□ -0.88
HLA-DPA1-241ENST00000417724 POLA2Q14181 598 aa9.58□□□□□ -0.88
HLA-DPA1-241ENST00000417724 GJC2Q5T442 439 aaPredicted RBP9.58□□□□□ -0.88
HLA-DPA1-241ENST00000417724 OLFML2BQ68BL8 750 aa9.58□□□□□ -0.88
HLA-DPA1-241ENST00000417724 MIGA1Q8NAN2 632 aa9.58□□□□□ -0.88
HLA-DPA1-241ENST00000417724 TRPV1Q8NER1 839 aa9.58□□□□□ -0.88
HLA-DPA1-241ENST00000417724 MAFAQ8NHW3 353 aaPredicted RBP9.58□□□□□ -0.88
HLA-DPA1-241ENST00000417724 ACER1Q8TDN7 264 aa9.58□□□□□ -0.88
HLA-DPA1-241ENST00000417724 FRAT1Q92837 279 aaPredicted RBP9.58□□□□□ -0.88
HLA-DPA1-241ENST00000417724 RPAP3Q9H6T3 665 aaPredicted RBP9.58□□□□□ -0.88
HLA-DPA1-241ENST00000417724 RLFQ13129 1914 aa9.58□□□□□ -0.88
HLA-DPA1-241ENST00000417724 SMCHD1A6NHR9 2005 aa9.57□□□□□ -0.88
HLA-DPA1-241ENST00000417724 SEPT4O43236 478 aa9.57□□□□□ -0.88
HLA-DPA1-241ENST00000417724 MYCNP04198 464 aaPredicted RBP9.57□□□□□ -0.88
HLA-DPA1-241ENST00000417724 ADORA2AP29274 412 aa9.57□□□□□ -0.88
HLA-DPA1-241ENST00000417724 SMAD3P84022 425 aaKnown RBP9.57□□□□□ -0.88
HLA-DPA1-241ENST00000417724 ATP8B2P98198 1209 aa9.57□□□□□ -0.88
HLA-DPA1-241ENST00000417724 MAP3K12Q12852 859 aa9.57□□□□□ -0.88
HLA-DPA1-241ENST00000417724 MAGEB6Q8N7X4 407 aa9.57□□□□□ -0.88
HLA-DPA1-241ENST00000417724 SHCBP1Q8NEM2 672 aa9.57□□□□□ -0.88
HLA-DPA1-241ENST00000417724 SSH3Q8TE77 659 aa9.57□□□□□ -0.88
HLA-DPA1-241ENST00000417724 BADQ92934 168 aa9.57□□□□□ -0.88
HLA-DPA1-241ENST00000417724 CLUAP1Q96AJ1 413 aa9.57□□□□□ -0.88
HLA-DPA1-241ENST00000417724 MOV10L1Q9BXT6 1211 aaKnown RBP9.57□□□□□ -0.88
HLA-DPA1-241ENST00000417724 PRDM5Q9NQX1 630 aaPredicted RBP9.57□□□□□ -0.88
HLA-DPA1-241ENST00000417724 LTBP2Q14767 1821 aa9.56□□□□□ -0.88
HLA-DPA1-241ENST00000417724 ZNFX1Q9P2E3 1918 aaKnown RBP9.56□□□□□ -0.88
HLA-DPA1-241ENST00000417724 BCAR3O75815 825 aa9.56□□□□□ -0.88
HLA-DPA1-241ENST00000417724 POLR3DP05423 398 aaPredicted RBP9.56□□□□□ -0.88
HLA-DPA1-241ENST00000417724 ERCC3P19447 782 aa9.56□□□□□ -0.88
HLA-DPA1-241ENST00000417724 SHMT1P34896 483 aa9.56□□□□□ -0.88
HLA-DPA1-241ENST00000417724 ADCYAP1R1P41586 468 aa9.56□□□□□ -0.88
HLA-DPA1-241ENST00000417724 PLCD1P51178 756 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms