RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 NIP7Q9Y221 180 aaKnown RBP eCLIP7.19□□□□□ -1.26
ECHDC1-206ENST00000417628 ATP6V0A2Q9Y487 856 aa7.19□□□□□ -1.26
ECHDC1-206ENST00000417628 ALPK3Q96L96 1907 aa7.19□□□□□ -1.26
ECHDC1-206ENST00000417628 LAMA2P24043 3122 aaKnown RBP7.18□□□□□ -1.26
ECHDC1-206ENST00000417628 TNFRSF10BO14763 440 aa7.18□□□□□ -1.26
ECHDC1-206ENST00000417628 FYB1O15117 783 aa7.18□□□□□ -1.26
ECHDC1-206ENST00000417628 ZIC2O95409 532 aaPredicted RBP7.18□□□□□ -1.26
ECHDC1-206ENST00000417628 WDR4P57081 412 aaKnown RBP7.18□□□□□ -1.26
ECHDC1-206ENST00000417628 PSMA6P60900 246 aaKnown RBP7.18□□□□□ -1.26
ECHDC1-206ENST00000417628 LDLRAD1Q5T700 205 aa7.18□□□□□ -1.26
ECHDC1-206ENST00000417628 SH3PXD2AQ5TCZ1 1133 aa7.18□□□□□ -1.26
ECHDC1-206ENST00000417628 PRAMEF18Q5VWM3 479 aa7.18□□□□□ -1.26
ECHDC1-206ENST00000417628 NECAB2Q7Z6G3 386 aa7.18□□□□□ -1.26
ECHDC1-206ENST00000417628 ZDHHC1Q8WTX9 485 aa7.18□□□□□ -1.26
ECHDC1-206ENST00000417628 EPHX3Q9H6B9 360 aa7.18□□□□□ -1.26
ECHDC1-206ENST00000417628 DCTN4Q9UJW0 460 aa7.18□□□□□ -1.26
ECHDC1-206ENST00000417628 V9GY48 417 aaPredicted RBP7.18□□□□□ -1.26
ECHDC1-206ENST00000417628 EML1O00423 815 aa7.17□□□□□ -1.26
ECHDC1-206ENST00000417628 FAM13AO94988 1023 aa7.17□□□□□ -1.26
ECHDC1-206ENST00000417628 TFRCP02786 760 aaKnown RBP7.17□□□□□ -1.26
ECHDC1-206ENST00000417628 TIMP2P16035 220 aa7.17□□□□□ -1.26
ECHDC1-206ENST00000417628 MPSTP25325 297 aa7.17□□□□□ -1.26
ECHDC1-206ENST00000417628 MAPK1P28482 360 aa7.17□□□□□ -1.26
ECHDC1-206ENST00000417628 LACTBP83111 547 aaPredicted RBP7.17□□□□□ -1.26
ECHDC1-206ENST00000417628 PRKG1Q13976 671 aa7.17□□□□□ -1.26
ECHDC1-206ENST00000417628 TEAD4Q15561 434 aa7.17□□□□□ -1.26
ECHDC1-206ENST00000417628 RAET1EQ8TD07 263 aa7.17□□□□□ -1.26
ECHDC1-206ENST00000417628 PAWRQ96IZ0 340 aaKnown RBP7.17□□□□□ -1.26
ECHDC1-206ENST00000417628 TRIM47Q96LD4 638 aa7.17□□□□□ -1.26
ECHDC1-206ENST00000417628 ASB16Q96NS5 453 aa7.17□□□□□ -1.26
ECHDC1-206ENST00000417628 TTYH1Q9H313 450 aaPredicted RBP7.17□□□□□ -1.26
ECHDC1-206ENST00000417628 ZFYVE28Q9HCC9 887 aa7.17□□□□□ -1.26
ECHDC1-206ENST00000417628 TOR4AQ9NXH8 423 aa7.17□□□□□ -1.26
ECHDC1-206ENST00000417628 LRFN2Q9ULH4 789 aa7.17□□□□□ -1.26
ECHDC1-206ENST00000417628 SCAF8Q9UPN6 1271 aaKnown RBP7.17□□□□□ -1.26
ECHDC1-206ENST00000417628 RIPOR2Q9Y4F9 1068 aa7.17□□□□□ -1.26
ECHDC1-206ENST00000417628 UBR2Q8IWV8 1755 aa7.17□□□□□ -1.26
ECHDC1-206ENST00000417628 ROCK2O75116 1388 aaKnown RBP7.17□□□□□ -1.26
ECHDC1-206ENST00000417628 TTC24A2A3L6 582 aaPredicted RBP7.16□□□□□ -1.26
ECHDC1-206ENST00000417628 ZNF16P17020 682 aaPredicted RBP7.16□□□□□ -1.26
ECHDC1-206ENST00000417628 SMPD1P17405 629 aa7.16□□□□□ -1.26
ECHDC1-206ENST00000417628 BRD2P25440 801 aaKnown RBP7.16□□□□□ -1.26
ECHDC1-206ENST00000417628 TAF1CQ15572 869 aaPredicted RBP7.16□□□□□ -1.26
ECHDC1-206ENST00000417628 MAP3K11Q16584 847 aa7.16□□□□□ -1.26
ECHDC1-206ENST00000417628 FAM26DQ5JW98 314 aa7.16□□□□□ -1.26
ECHDC1-206ENST00000417628 DIS3LQ8TF46 1054 aaKnown RBP7.16□□□□□ -1.26
ECHDC1-206ENST00000417628 MYO19Q96H55 970 aa7.16□□□□□ -1.26
ECHDC1-206ENST00000417628 NECAB3Q96P71 396 aaPredicted RBP7.16□□□□□ -1.26
ECHDC1-206ENST00000417628 PTPN18Q99952 460 aa7.16□□□□□ -1.26
ECHDC1-206ENST00000417628 TEX13AQ9BXU3 409 aaPredicted RBP7.16□□□□□ -1.26
ECHDC1-206ENST00000417628 NYXQ9GZU5 481 aa7.16□□□□□ -1.26
ECHDC1-206ENST00000417628 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.16□□□□□ -1.26
ECHDC1-206ENST00000417628 ANGEL1Q9UNK9 670 aaKnown RBP7.16□□□□□ -1.26
ECHDC1-206ENST00000417628 RTL9Q8NET4 1388 aa7.16□□□□□ -1.26
ECHDC1-206ENST00000417628 ZSWIM8A7E2V4 1837 aa7.15□□□□□ -1.26
ECHDC1-206ENST00000417628 MUC6Q6W4X9 2439 aa7.15□□□□□ -1.26
ECHDC1-206ENST00000417628 SERTM1A2A2V5 107 aa7.15□□□□□ -1.26
ECHDC1-206ENST00000417628 FAM86C2PA6NEL3 165 aa7.15□□□□□ -1.26
ECHDC1-206ENST00000417628 MEN1O00255 615 aa7.15□□□□□ -1.26
ECHDC1-206ENST00000417628 ZNF280AP59817 542 aaPredicted RBP7.15□□□□□ -1.26
ECHDC1-206ENST00000417628 RELBQ01201 579 aa7.15□□□□□ -1.26
ECHDC1-206ENST00000417628 TRIM67Q6ZTA4 783 aa7.15□□□□□ -1.26
ECHDC1-206ENST00000417628 TTC5Q8N0Z6 440 aa7.15□□□□□ -1.26
ECHDC1-206ENST00000417628 CYP4X1Q8N118 509 aa7.15□□□□□ -1.26
ECHDC1-206ENST00000417628 YTHDC1Q96MU7 727 aaKnown RBP7.15□□□□□ -1.26
ECHDC1-206ENST00000417628 PUS7Q96PZ0 661 aaKnown RBP7.15□□□□□ -1.26
ECHDC1-206ENST00000417628 ZNF395Q9H8N7 513 aaPredicted RBP7.15□□□□□ -1.26
ECHDC1-206ENST00000417628 DBNDD1Q9H9R9 158 aa7.15□□□□□ -1.26
ECHDC1-206ENST00000417628 C11orf16Q9NQ32 467 aa7.15□□□□□ -1.26
ECHDC1-206ENST00000417628 KIAA1522Q9P206 1035 aaPredicted RBP7.15□□□□□ -1.26
ECHDC1-206ENST00000417628 SRRDQ9UH36 339 aa7.15□□□□□ -1.26
ECHDC1-206ENST00000417628 DUOX1Q9NRD9 1551 aa7.15□□□□□ -1.27
ECHDC1-206ENST00000417628 DDX60Q8IY21 1712 aaKnown RBP7.15□□□□□ -1.27
ECHDC1-206ENST00000417628 KIF20BQ96Q89 1820 aa7.15□□□□□ -1.27
ECHDC1-206ENST00000417628 ZBTB39O15060 712 aa7.14□□□□□ -1.27
ECHDC1-206ENST00000417628 KRT37O76014 449 aa7.14□□□□□ -1.27
ECHDC1-206ENST00000417628 NOS2P35228 1153 aa7.14□□□□□ -1.27
ECHDC1-206ENST00000417628 TNNT2P45379 298 aaPredicted RBP7.14□□□□□ -1.27
ECHDC1-206ENST00000417628 TAGLNQ01995 201 aaKnown RBP7.14□□□□□ -1.27
ECHDC1-206ENST00000417628 EIF4A2Q14240 407 aaKnown RBP7.14□□□□□ -1.27
ECHDC1-206ENST00000417628 FBXO33Q7Z6M2 555 aa7.14□□□□□ -1.27
ECHDC1-206ENST00000417628 GIPC2Q8TF65 315 aa7.14□□□□□ -1.27
ECHDC1-206ENST00000417628 NLRP3Q96P20 1036 aa7.14□□□□□ -1.27
ECHDC1-206ENST00000417628 STIM2Q9P246 746 aa7.14□□□□□ -1.27
ECHDC1-206ENST00000417628 HEG1Q9ULI3 1381 aa7.14□□□□□ -1.27
ECHDC1-206ENST00000417628 IBTKQ9P2D0 1353 aaPredicted RBP7.13□□□□□ -1.27
ECHDC1-206ENST00000417628 ABCC4O15439 1325 aa7.13□□□□□ -1.27
ECHDC1-206ENST00000417628 MYPNQ86TC9 1320 aa7.13□□□□□ -1.27
ECHDC1-206ENST00000417628 ADGRA2Q96PE1 1338 aa7.13□□□□□ -1.27
ECHDC1-206ENST00000417628 SMIM22K7EJ46 135 aa7.13□□□□□ -1.27
ECHDC1-206ENST00000417628 ECE2O60344 883 aa7.13□□□□□ -1.27
ECHDC1-206ENST00000417628 FZD6O60353 706 aa7.13□□□□□ -1.27
ECHDC1-206ENST00000417628 WDHD1O75717 1129 aaPredicted RBP7.13□□□□□ -1.27
ECHDC1-206ENST00000417628 A1BGP04217 495 aa7.13□□□□□ -1.27
ECHDC1-206ENST00000417628 HOXD10P28358 340 aa7.13□□□□□ -1.27
ECHDC1-206ENST00000417628 EIF1AXP47813 144 aaKnown RBP7.13□□□□□ -1.27
ECHDC1-206ENST00000417628 SMAD3P84022 425 aaKnown RBP7.13□□□□□ -1.27
ECHDC1-206ENST00000417628 ZSCAN29Q8IWY8 852 aaPredicted RBP7.13□□□□□ -1.27
ECHDC1-206ENST00000417628 RGL4Q8IZJ4 473 aa7.13□□□□□ -1.27
ECHDC1-206ENST00000417628 MEIOBQ8N635 442 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms