RNA–Protein interactions for RNA: ENST00000417389.1

TM9SF4-203, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-203ENST00000417389 USP14P54578 494 aa13.18□□□□□ -0.3
TM9SF4-203ENST00000417389 SBK1Q52WX2 424 aa13.18□□□□□ -0.3
TM9SF4-203ENST00000417389 TMEM179Q6ZVK1 233 aa13.18□□□□□ -0.3
TM9SF4-203ENST00000417389 CENPQQ7L2Z9 268 aaPredicted RBP13.18□□□□□ -0.3
TM9SF4-203ENST00000417389 ZNF444Q8N0Y2 327 aaPredicted RBP13.18□□□□□ -0.3
TM9SF4-203ENST00000417389 CCDC17Q96LX7 622 aa13.18□□□□□ -0.3
TM9SF4-203ENST00000417389 EFCC1Q9HA90 598 aa13.18□□□□□ -0.3
TM9SF4-203ENST00000417389 ARHGEF10LQ9HCE6 1279 aa13.18□□□□□ -0.3
TM9SF4-203ENST00000417389 DDX60LQ5H9U9 1706 aaKnown RBP13.17□□□□□ -0.3
TM9SF4-203ENST00000417389 CCDC85CA6NKD9 419 aa13.17□□□□□ -0.3
TM9SF4-203ENST00000417389 PRDM1O75626 825 aa13.17□□□□□ -0.3
TM9SF4-203ENST00000417389 ICA1Q05084 483 aa13.17□□□□□ -0.3
TM9SF4-203ENST00000417389 PDE4BQ07343 736 aa13.17□□□□□ -0.3
TM9SF4-203ENST00000417389 TTC22Q5TAA0 569 aa13.17□□□□□ -0.3
TM9SF4-203ENST00000417389 VPS53Q5VIR6 699 aa13.17□□□□□ -0.3
TM9SF4-203ENST00000417389 ACER1Q8TDN7 264 aa13.17□□□□□ -0.3
TM9SF4-203ENST00000417389 ABHD8Q96I13 439 aa13.17□□□□□ -0.3
TM9SF4-203ENST00000417389 TOMM22Q9NS69 142 aa13.17□□□□□ -0.3
TM9SF4-203ENST00000417389 TAOK2Q9UL54 1235 aa13.17□□□□□ -0.3
TM9SF4-203ENST00000417389 SLC45A1Q9Y2W3 748 aa13.17□□□□□ -0.3
TM9SF4-203ENST00000417389 CCDC171Q6TFL3 1326 aa13.16□□□□□ -0.3
TM9SF4-203ENST00000417389 FMNL1O95466 1100 aaPredicted RBP13.16□□□□□ -0.3
TM9SF4-203ENST00000417389 PPARAQ07869 468 aa13.16□□□□□ -0.3
TM9SF4-203ENST00000417389 PKN2Q16513 984 aaKnown RBP13.16□□□□□ -0.3
TM9SF4-203ENST00000417389 SH3D19Q5HYK7 790 aa13.16□□□□□ -0.3
TM9SF4-203ENST00000417389 SAMD1Q6SPF0 538 aaPredicted RBP13.16□□□□□ -0.3
TM9SF4-203ENST00000417389 TICAM2Q86XR7 235 aa13.16□□□□□ -0.3
TM9SF4-203ENST00000417389 CLEC10AQ8IUN9 316 aa13.16□□□□□ -0.3
TM9SF4-203ENST00000417389 ASCC2Q9H1I8 757 aaPredicted RBP13.16□□□□□ -0.3
TM9SF4-203ENST00000417389 SH2D4AQ9H788 454 aa13.16□□□□□ -0.3
TM9SF4-203ENST00000417389 LAMB1P07942 1786 aa13.16□□□□□ -0.3
TM9SF4-203ENST00000417389 GUCY1A2P33402 732 aa13.15□□□□□ -0.3
TM9SF4-203ENST00000417389 LACTBP83111 547 aaPredicted RBP13.15□□□□□ -0.3
TM9SF4-203ENST00000417389 IFFO2Q5TF58 517 aa13.15□□□□□ -0.3
TM9SF4-203ENST00000417389 C17orf99Q6UX52 265 aa13.15□□□□□ -0.3
TM9SF4-203ENST00000417389 OTOP1Q7RTM1 612 aa13.15□□□□□ -0.3
TM9SF4-203ENST00000417389 ZNF589Q86UQ0 364 aaPredicted RBP13.15□□□□□ -0.3
TM9SF4-203ENST00000417389 CCAR1Q8IX12 1150 aaKnown RBP13.15□□□□□ -0.3
TM9SF4-203ENST00000417389 ANKRD13CQ8N6S4 541 aa13.15□□□□□ -0.3
TM9SF4-203ENST00000417389 KIAA1683Q9H0B3 1180 aa13.15□□□□□ -0.3
TM9SF4-203ENST00000417389 CWC22Q9HCG8 908 aaKnown RBP13.15□□□□□ -0.3
TM9SF4-203ENST00000417389 EMILIN3Q9NT22 766 aa13.15□□□□□ -0.3
TM9SF4-203ENST00000417389 PHIPQ8WWQ0 1821 aa13.14□□□□□ -0.31
TM9SF4-203ENST00000417389 TSPY3P0CV98 308 aa13.14□□□□□ -0.31
TM9SF4-203ENST00000417389 TSPY8P0CW00 308 aa13.14□□□□□ -0.31
TM9SF4-203ENST00000417389 GSPT1P15170 499 aaKnown RBP13.14□□□□□ -0.31
TM9SF4-203ENST00000417389 RASA1P20936 1047 aa13.14□□□□□ -0.31
TM9SF4-203ENST00000417389 PSMC4P43686 418 aa13.14□□□□□ -0.31
TM9SF4-203ENST00000417389 FCGRTP55899 365 aa13.14□□□□□ -0.31
TM9SF4-203ENST00000417389 CTDSPL2Q05D32 466 aa13.14□□□□□ -0.31
TM9SF4-203ENST00000417389 RRP12Q5JTH9 1297 aaKnown RBP13.14□□□□□ -0.31
TM9SF4-203ENST00000417389 PAGR1Q9BTK6 254 aa13.14□□□□□ -0.31
TM9SF4-203ENST00000417389 TANGO6Q9C0B7 1094 aa13.14□□□□□ -0.31
TM9SF4-203ENST00000417389 ARHGAP39Q9C0H5 1083 aa13.14□□□□□ -0.31
TM9SF4-203ENST00000417389 KANSL2Q9H9L4 492 aa13.14□□□□□ -0.31
TM9SF4-203ENST00000417389 ISY1Q9ULR0 285 aaKnown RBP13.14□□□□□ -0.31
TM9SF4-203ENST00000417389 ROBO3Q96MS0 1386 aa13.13□□□□□ -0.31
TM9SF4-203ENST00000417389 USP17L15C9J2P7 530 aa13.13□□□□□ -0.31
TM9SF4-203ENST00000417389 USP17L13C9JLJ4 530 aa13.13□□□□□ -0.31
TM9SF4-203ENST00000417389 USP17L11C9JVI0 530 aa13.13□□□□□ -0.31
TM9SF4-203ENST00000417389 USP17L18D6R9N7 530 aa13.13□□□□□ -0.31
TM9SF4-203ENST00000417389 USP17L22D6RA61 530 aa13.13□□□□□ -0.31
TM9SF4-203ENST00000417389 USP17L17D6RBQ6 530 aa13.13□□□□□ -0.31
TM9SF4-203ENST00000417389 USP17L19D6RCP7 530 aa13.13□□□□□ -0.31
TM9SF4-203ENST00000417389 USP17L20D6RJB6 530 aa13.13□□□□□ -0.31
TM9SF4-203ENST00000417389 RANBP6O60518 1105 aaKnown RBP13.13□□□□□ -0.31
TM9SF4-203ENST00000417389 HSPD1P10809 573 aaKnown RBP13.13□□□□□ -0.31
TM9SF4-203ENST00000417389 EEF2P13639 858 aaKnown RBP13.13□□□□□ -0.31
TM9SF4-203ENST00000417389 VCAM1P19320 739 aa13.13□□□□□ -0.31
TM9SF4-203ENST00000417389 HOXD10P28358 340 aa13.13□□□□□ -0.31
TM9SF4-203ENST00000417389 GCLCP48506 637 aaPredicted RBP13.13□□□□□ -0.31
TM9SF4-203ENST00000417389 HAND2P61296 217 aa13.13□□□□□ -0.31
TM9SF4-203ENST00000417389 USP17L24Q0WX57 530 aa13.13□□□□□ -0.31
TM9SF4-203ENST00000417389 FAM47AQ5JRC9 791 aa13.13□□□□□ -0.31
TM9SF4-203ENST00000417389 FBXO46Q6PJ61 603 aaPredicted RBP13.13□□□□□ -0.31
TM9SF4-203ENST00000417389 SPICE1Q8N0Z3 855 aa13.13□□□□□ -0.31
TM9SF4-203ENST00000417389 RUFY2Q8WXA3 655 aa13.13□□□□□ -0.31
TM9SF4-203ENST00000417389 RPAP3Q9H6T3 665 aaPredicted RBP13.13□□□□□ -0.31
TM9SF4-203ENST00000417389 GOPCQ9HD26 462 aa13.13□□□□□ -0.31
TM9SF4-203ENST00000417389 MYH8P13535 1937 aa13.13□□□□□ -0.31
TM9SF4-203ENST00000417389 A0A1W2PRG0 241 aa13.12□□□□□ -0.31
TM9SF4-203ENST00000417389 TSPY2A6NKD2 308 aa13.12□□□□□ -0.31
TM9SF4-203ENST00000417389 TNPO2O14787 897 aaKnown RBP13.12□□□□□ -0.31
TM9SF4-203ENST00000417389 FGAP02671 866 aa13.12□□□□□ -0.31
TM9SF4-203ENST00000417389 HERVK_113P62684 666 aa13.12□□□□□ -0.31
TM9SF4-203ENST00000417389 TFAP4Q01664 338 aa13.12□□□□□ -0.31
TM9SF4-203ENST00000417389 P2RX7Q99572 595 aaKnown RBP13.12□□□□□ -0.31
TM9SF4-203ENST00000417389 CLIP2Q9UDT6 1046 aa13.12□□□□□ -0.31
TM9SF4-203ENST00000417389 HPS5Q9UPZ3 1129 aa13.12□□□□□ -0.31
TM9SF4-203ENST00000417389 ADGRA2Q96PE1 1338 aa13.12□□□□□ -0.31
TM9SF4-203ENST00000417389 PTPRFP10586 1907 aa13.11□□□□□ -0.31
TM9SF4-203ENST00000417389 BCRP11274 1271 aa13.11□□□□□ -0.31
TM9SF4-203ENST00000417389 HOXA7P31268 230 aaPredicted RBP13.11□□□□□ -0.31
TM9SF4-203ENST00000417389 ALX1Q15699 326 aa13.11□□□□□ -0.31
TM9SF4-203ENST00000417389 SKAP1Q86WV1 359 aa13.11□□□□□ -0.31
TM9SF4-203ENST00000417389 RAET1EQ8TD07 263 aa13.11□□□□□ -0.31
TM9SF4-203ENST00000417389 C12orf42Q96LP6 360 aa13.11□□□□□ -0.31
TM9SF4-203ENST00000417389 INCENPQ9NQS7 918 aa13.11□□□□□ -0.31
TM9SF4-203ENST00000417389 PTPN22Q9Y2R2 807 aa13.11□□□□□ -0.31
TM9SF4-203ENST00000417389 TMX2Q9Y320 296 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms