RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 LCORLQ8N3X6 602 aa26.39■■□□□ 1.82
ACTB-203ENST00000417101 KIAA1683Q9H0B3 1180 aa26.39■■□□□ 1.82
ACTB-203ENST00000417101 BOLA2Q9H3K6 86 aa26.39■■□□□ 1.82
ACTB-203ENST00000417101 RANBP2P49792 3224 aaKnown RBP26.38■■□□□ 1.81
ACTB-203ENST00000417101 TRIOBPQ9H2D6 2365 aa26.38■■□□□ 1.81
ACTB-203ENST00000417101 USP17L15C9J2P7 530 aa26.38■■□□□ 1.81
ACTB-203ENST00000417101 USP17L13C9JLJ4 530 aa26.38■■□□□ 1.81
ACTB-203ENST00000417101 USP17L11C9JVI0 530 aa26.38■■□□□ 1.81
ACTB-203ENST00000417101 USP17L18D6R9N7 530 aa26.38■■□□□ 1.81
ACTB-203ENST00000417101 USP17L22D6RA61 530 aa26.38■■□□□ 1.81
ACTB-203ENST00000417101 USP17L17D6RBQ6 530 aa26.38■■□□□ 1.81
ACTB-203ENST00000417101 USP17L19D6RCP7 530 aa26.38■■□□□ 1.81
ACTB-203ENST00000417101 USP17L20D6RJB6 530 aa26.38■■□□□ 1.81
ACTB-203ENST00000417101 USP14P54578 494 aa26.38■■□□□ 1.81
ACTB-203ENST00000417101 GABPAQ06546 454 aa26.38■■□□□ 1.81
ACTB-203ENST00000417101 USP17L24Q0WX57 530 aa26.38■■□□□ 1.81
ACTB-203ENST00000417101 SDR42E1Q8WUS8 393 aa26.38■■□□□ 1.81
ACTB-203ENST00000417101 TRIB2Q92519 343 aa26.38■■□□□ 1.81
ACTB-203ENST00000417101 NUDT12Q9BQG2 462 aa26.38■■□□□ 1.81
ACTB-203ENST00000417101 PORCNQ9H237 461 aa26.38■■□□□ 1.81
ACTB-203ENST00000417101 HMX1Q9NP08 348 aaPredicted RBP26.38■■□□□ 1.81
ACTB-203ENST00000417101 PAG1Q9NWQ8 432 aa26.38■■□□□ 1.81
ACTB-203ENST00000417101 FXR1P51114 621 aaKnown RBP eCLIP26.37■■□□□ 1.812e-13■□□□□ 11.2
ACTB-203ENST00000417101 PDE3AQ14432 1141 aa26.37■■□□□ 1.81
ACTB-203ENST00000417101 C20orf194Q5TEA3 1177 aa26.37■■□□□ 1.81
ACTB-203ENST00000417101 CHRDL2Q6WN34 429 aa26.37■■□□□ 1.81
ACTB-203ENST00000417101 SOCS4Q8WXH5 440 aa26.37■■□□□ 1.81
ACTB-203ENST00000417101 RPTORQ8N122 1335 aa26.37■■□□□ 1.81
ACTB-203ENST00000417101 DDX60LQ5H9U9 1706 aaKnown RBP26.36■■□□□ 1.81
ACTB-203ENST00000417101 ATP5JP18859 108 aa26.36■■□□□ 1.81
ACTB-203ENST00000417101 SEPT2Q15019 361 aa26.36■■□□□ 1.81
ACTB-203ENST00000417101 ARMT1Q9H993 441 aa26.36■■□□□ 1.81
ACTB-203ENST00000417101 DCP1AQ9NPI6 582 aaPredicted RBP26.36■■□□□ 1.81
ACTB-203ENST00000417101 NR2E3Q9Y5X4 410 aa26.36■■□□□ 1.81
ACTB-203ENST00000417101 PLXNB2O15031 1838 aa26.35■■□□□ 1.81
ACTB-203ENST00000417101 VCAM1P19320 739 aa26.35■■□□□ 1.81
ACTB-203ENST00000417101 GUCY1A2P33402 732 aa26.35■■□□□ 1.81
ACTB-203ENST00000417101 SLFNL1Q499Z3 407 aa26.35■■□□□ 1.81
ACTB-203ENST00000417101 CATSPERGQ6ZRH7 1159 aa26.35■■□□□ 1.81
ACTB-203ENST00000417101 GPR142Q7Z601 462 aa26.35■■□□□ 1.81
ACTB-203ENST00000417101 NAV1Q8NEY1 1877 aa26.35■■□□□ 1.81
ACTB-203ENST00000417101 PAWRQ96IZ0 340 aaKnown RBP26.35■■□□□ 1.81
ACTB-203ENST00000417101 RABGAP1Q9Y3P9 1069 aa26.35■■□□□ 1.81
ACTB-203ENST00000417101 MPHOSPH10O00566 681 aaKnown RBP26.34■■□□□ 1.81
ACTB-203ENST00000417101 CYP2D6P10635 497 aa26.34■■□□□ 1.81
ACTB-203ENST00000417101 XRCC5P13010 732 aaKnown RBP26.34■■□□□ 1.81
ACTB-203ENST00000417101 ADD2P35612 726 aa26.34■■□□□ 1.81
ACTB-203ENST00000417101 PLEKHH3Q7Z736 793 aa26.34■■□□□ 1.81
ACTB-203ENST00000417101 HAUS7Q99871 368 aa26.34■■□□□ 1.81
ACTB-203ENST00000417101 CWC22Q9HCG8 908 aaKnown RBP26.34■■□□□ 1.81
ACTB-203ENST00000417101 CNMDO75829 334 aa26.33■■□□□ 1.81
ACTB-203ENST00000417101 MBD4O95243 580 aa26.33■■□□□ 1.81
ACTB-203ENST00000417101 NECAB2Q7Z6G3 386 aa26.33■■□□□ 1.81
ACTB-203ENST00000417101 DIS3LQ8TF46 1054 aaKnown RBP26.33■■□□□ 1.81
ACTB-203ENST00000417101 USP6NLQ92738 828 aa26.33■■□□□ 1.81
ACTB-203ENST00000417101 PRKAB2O43741 272 aa26.32■■□□□ 1.8
ACTB-203ENST00000417101 EVI5O60447 810 aa26.32■■□□□ 1.8
ACTB-203ENST00000417101 PRKAR2AP13861 404 aaKnown RBP26.32■■□□□ 1.8
ACTB-203ENST00000417101 ZKSCAN1P17029 563 aaPredicted RBP26.32■■□□□ 1.8
ACTB-203ENST00000417101 MORN1Q5T089 497 aa26.32■■□□□ 1.8
ACTB-203ENST00000417101 SLC44A5Q8NCS7 719 aa26.32■■□□□ 1.8
ACTB-203ENST00000417101 LRRCC1Q9C099 1032 aa26.32■■□□□ 1.8
ACTB-203ENST00000417101 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.32■■□□□ 1.84e-18■□□□□ 10
ACTB-203ENST00000417101 RPAP3Q9H6T3 665 aaPredicted RBP26.32■■□□□ 1.8
ACTB-203ENST00000417101 SMARCA5O60264 1052 aaPredicted RBP26.31■■□□□ 1.8
ACTB-203ENST00000417101 RGS2P41220 211 aa26.31■■□□□ 1.8
ACTB-203ENST00000417101 CCNA1P78396 465 aa26.31■■□□□ 1.8
ACTB-203ENST00000417101 MAP3K21Q5TCX8 1036 aa26.31■■□□□ 1.8
ACTB-203ENST00000417101 TRMT44Q8IYL2 757 aaKnown RBP26.31■■□□□ 1.8
ACTB-203ENST00000417101 ANKLE1Q8NAG6 615 aa26.31■■□□□ 1.8
ACTB-203ENST00000417101 DYNLL2Q96FJ2 89 aa26.31■■□□□ 1.8
ACTB-203ENST00000417101 RBM27Q9P2N5 1060 aaKnown RBP26.31■■□□□ 1.8
ACTB-203ENST00000417101 A0A1W2PRG0 241 aa26.3■■□□□ 1.8
ACTB-203ENST00000417101 CHGBP05060 677 aa26.3■■□□□ 1.8
ACTB-203ENST00000417101 CCL14Q16627 93 aa26.3■■□□□ 1.8
ACTB-203ENST00000417101 WDR78Q5VTH9 848 aa26.29■■□□□ 1.8
ACTB-203ENST00000417101 LBX2Q6XYB7 198 aa26.29■■□□□ 1.8
ACTB-203ENST00000417101 APBA2Q99767 749 aa26.29■■□□□ 1.8
ACTB-203ENST00000417101 ATP8A2Q9NTI2 1148 aa26.29■■□□□ 1.8
ACTB-203ENST00000417101 BTBD7Q9P203 1132 aa26.29■■□□□ 1.8
ACTB-203ENST00000417101 SWAP70Q9UH65 585 aa26.29■■□□□ 1.8
ACTB-203ENST00000417101 SPDYE16A6NNV3 312 aaPredicted RBP26.28■■□□□ 1.8
ACTB-203ENST00000417101 GLRX3O76003 335 aaKnown RBP26.28■■□□□ 1.8
ACTB-203ENST00000417101 CACNB2Q08289 660 aaPredicted RBP26.28■■□□□ 1.8
ACTB-203ENST00000417101 MAP2K5Q13163 448 aa26.28■■□□□ 1.8
ACTB-203ENST00000417101 TMEM179Q6ZVK1 233 aa26.28■■□□□ 1.8
ACTB-203ENST00000417101 UBE3CQ15386 1083 aa26.27■■□□□ 1.8
ACTB-203ENST00000417101 NBPF3Q9H094 633 aa26.27■■□□□ 1.8
ACTB-203ENST00000417101 OGDHLQ9ULD0 1010 aa26.27■■□□□ 1.8
ACTB-203ENST00000417101 CYP2D7A0A087X1C5 515 aa26.26■■□□□ 1.79
ACTB-203ENST00000417101 SMIM22K7EJ46 135 aa26.26■■□□□ 1.79
ACTB-203ENST00000417101 MNX1P50219 401 aaPredicted RBP26.26■■□□□ 1.79
ACTB-203ENST00000417101 USP17L12C9JPN9 530 aa26.25■■□□□ 1.79
ACTB-203ENST00000417101 USP17L21D6R901 530 aa26.25■■□□□ 1.79
ACTB-203ENST00000417101 AKR1B1P15121 316 aa26.25■■□□□ 1.79
ACTB-203ENST00000417101 PTPREP23469 700 aa26.25■■□□□ 1.79
ACTB-203ENST00000417101 C12orf60Q5U649 245 aa26.25■■□□□ 1.79
ACTB-203ENST00000417101 ZSCAN25Q6NSZ9 544 aa26.25■■□□□ 1.79
ACTB-203ENST00000417101 CLEC10AQ8IUN9 316 aa26.25■■□□□ 1.79
ACTB-203ENST00000417101 AMOTL1Q8IY63 956 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms