RNA–Protein interactions for RNA: ENST00000417012.5

LRRTM1-205, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 3,021 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-205ENST00000417012 CNNM2Q9H8M5 875 aa14.58□□□□□ -0.08
LRRTM1-205ENST00000417012 MRPL44Q9H9J2 332 aaKnown RBP14.58□□□□□ -0.08
LRRTM1-205ENST00000417012 EPB41L4AQ9HCS5 686 aaPredicted RBP14.58□□□□□ -0.08
LRRTM1-205ENST00000417012 KCNJ14Q9UNX9 436 aa14.58□□□□□ -0.08
LRRTM1-205ENST00000417012 NRAPQ86VF7 1730 aa14.58□□□□□ -0.08
LRRTM1-205ENST00000417012 A0A1B0GTH6 734 aa14.58□□□□□ -0.08
LRRTM1-205ENST00000417012 CHMP4BP1P59074 171 aa14.58□□□□□ -0.08
LRRTM1-205ENST00000417012 ST5P78524 1137 aa14.58□□□□□ -0.08
LRRTM1-205ENST00000417012 NR1I3Q14994 352 aa14.58□□□□□ -0.08
LRRTM1-205ENST00000417012 BRD3Q15059 726 aa14.58□□□□□ -0.08
LRRTM1-205ENST00000417012 FAM98CQ17RN3 349 aaKnown RBP14.58□□□□□ -0.08
LRRTM1-205ENST00000417012 C3orf67Q6ZVT6 689 aa14.58□□□□□ -0.08
LRRTM1-205ENST00000417012 NAA15Q9BXJ9 866 aaKnown RBP14.58□□□□□ -0.08
LRRTM1-205ENST00000417012 FUT8Q9BYC5 575 aa14.58□□□□□ -0.08
LRRTM1-205ENST00000417012 TMEM51Q9NW97 253 aa14.58□□□□□ -0.08
LRRTM1-205ENST00000417012 SOWAHDA6NJG2 315 aa14.57□□□□□ -0.08
LRRTM1-205ENST00000417012 KIF5CO60282 957 aa14.57□□□□□ -0.08
LRRTM1-205ENST00000417012 IGHMBP2P38935 993 aaKnown RBP14.57□□□□□ -0.08
LRRTM1-205ENST00000417012 CHRNDQ07001 517 aa14.57□□□□□ -0.08
LRRTM1-205ENST00000417012 MTF1Q14872 753 aa14.57□□□□□ -0.08
LRRTM1-205ENST00000417012 ALX1Q15699 326 aa14.57□□□□□ -0.08
LRRTM1-205ENST00000417012 RTN1Q16799 776 aa14.57□□□□□ -0.08
LRRTM1-205ENST00000417012 MIGA1Q8NAN2 632 aa14.57□□□□□ -0.08
LRRTM1-205ENST00000417012 AK7Q96M32 723 aa14.57□□□□□ -0.08
LRRTM1-205ENST00000417012 ZCCHC17Q9NP64 241 aaKnown RBP14.57□□□□□ -0.08
LRRTM1-205ENST00000417012 LZTFL1Q9NQ48 299 aa14.57□□□□□ -0.08
LRRTM1-205ENST00000417012 ZSWIM5Q9P217 1185 aa14.57□□□□□ -0.08
LRRTM1-205ENST00000417012 TACC3Q9Y6A5 838 aa14.57□□□□□ -0.08
LRRTM1-205ENST00000417012 LRP5O75197 1615 aa14.57□□□□□ -0.08
LRRTM1-205ENST00000417012 GUCY1A2P33402 732 aa14.57□□□□□ -0.08
LRRTM1-205ENST00000417012 LONRF2Q1L5Z9 754 aa14.57□□□□□ -0.08
LRRTM1-205ENST00000417012 SRGAP1Q7Z6B7 1085 aa14.57□□□□□ -0.08
LRRTM1-205ENST00000417012 SRPRBQ9Y5M8 271 aaKnown RBP14.57□□□□□ -0.08
LRRTM1-205ENST00000417012 TULP2O00295 520 aa14.56□□□□□ -0.08
LRRTM1-205ENST00000417012 ACTN4O43707 911 aaKnown RBP14.56□□□□□ -0.08
LRRTM1-205ENST00000417012 MAP3K12Q12852 859 aa14.56□□□□□ -0.08
LRRTM1-205ENST00000417012 SART3Q15020 963 aaKnown RBP14.56□□□□□ -0.08
LRRTM1-205ENST00000417012 IFNL3Q8IZI9 196 aa14.56□□□□□ -0.08
LRRTM1-205ENST00000417012 KRT23Q9C075 422 aa14.56□□□□□ -0.08
LRRTM1-205ENST00000417012 ZSWIM4Q9H7M6 989 aa14.56□□□□□ -0.08
LRRTM1-205ENST00000417012 PCDHB6Q9Y5E3 794 aa14.56□□□□□ -0.08
LRRTM1-205ENST00000417012 ATP2B1P20020 1258 aa14.56□□□□□ -0.08
LRRTM1-205ENST00000417012 PARP10Q53GL7 1025 aa14.56□□□□□ -0.08
LRRTM1-205ENST00000417012 CEP112Q8N8E3 955 aa14.56□□□□□ -0.08
LRRTM1-205ENST00000417012 IGSF22Q8N9C0 903 aa14.56□□□□□ -0.08
LRRTM1-205ENST00000417012 SYNRGQ9UMZ2 1314 aa14.56□□□□□ -0.08
LRRTM1-205ENST00000417012 NID2Q14112 1375 aa14.55□□□□□ -0.08
LRRTM1-205ENST00000417012 PATL2C9JE40 543 aaKnown RBP14.55□□□□□ -0.08
LRRTM1-205ENST00000417012 POTEB2H3BUK9 544 aa14.55□□□□□ -0.08
LRRTM1-205ENST00000417012 DEXIO95424 95 aa14.55□□□□□ -0.08
LRRTM1-205ENST00000417012 ERFEQ4G0M1 354 aa14.55□□□□□ -0.08
LRRTM1-205ENST00000417012 MUM1L1Q5H9M0 696 aa14.55□□□□□ -0.08
LRRTM1-205ENST00000417012 LCORLQ8N3X6 602 aa14.55□□□□□ -0.08
LRRTM1-205ENST00000417012 MED15Q96RN5 788 aa14.55□□□□□ -0.08
LRRTM1-205ENST00000417012 IRX2Q9BZI1 471 aaPredicted RBP14.55□□□□□ -0.08
LRRTM1-205ENST00000417012 TSPYL1Q9H0U9 437 aa14.55□□□□□ -0.08
LRRTM1-205ENST00000417012 TOMM22Q9NS69 142 aa14.55□□□□□ -0.08
LRRTM1-205ENST00000417012 ADGRG1Q9Y653 693 aa14.55□□□□□ -0.08
LRRTM1-205ENST00000417012 NR5A1Q13285 461 aa14.55□□□□□ -0.08
LRRTM1-205ENST00000417012 CT47A1Q5JQC4 288 aaPredicted RBP14.55□□□□□ -0.08
LRRTM1-205ENST00000417012 RRP12Q5JTH9 1297 aaKnown RBP14.55□□□□□ -0.08
LRRTM1-205ENST00000417012 AKNAD1Q5T1N1 836 aa14.55□□□□□ -0.08
LRRTM1-205ENST00000417012 SPATA1Q5VX52 437 aa14.55□□□□□ -0.08
LRRTM1-205ENST00000417012 MFSD6Q6ZSS7 791 aa14.55□□□□□ -0.08
LRRTM1-205ENST00000417012 LINC00116Q8NCU8 138 aa14.55□□□□□ -0.08
LRRTM1-205ENST00000417012 CCDC196A0A1B0GTZ2 297 aa14.55□□□□□ -0.08
LRRTM1-205ENST00000417012 ERICH2A1L162 156 aa14.55□□□□□ -0.08
LRRTM1-205ENST00000417012 WTAPQ15007 396 aa14.55□□□□□ -0.08
LRRTM1-205ENST00000417012 FILIP1LQ4L180 1135 aa14.55□□□□□ -0.08
LRRTM1-205ENST00000417012 KLHL10Q6JEL2 608 aa14.55□□□□□ -0.08
LRRTM1-205ENST00000417012 CCDC82Q8N4S0 544 aa14.55□□□□□ -0.08
LRRTM1-205ENST00000417012 SPATA20Q8TB22 786 aa14.55□□□□□ -0.08
LRRTM1-205ENST00000417012 ARAP2Q8WZ64 1704 aa14.55□□□□□ -0.08
LRRTM1-205ENST00000417012 ZKSCAN3Q9BRR0 538 aa14.55□□□□□ -0.08
LRRTM1-205ENST00000417012 CSRNP2Q9H175 543 aa14.55□□□□□ -0.08
LRRTM1-205ENST00000417012 CDC23Q9UJX2 597 aa14.55□□□□□ -0.08
LRRTM1-205ENST00000417012 TEX33O43247 280 aa14.54□□□□□ -0.08
LRRTM1-205ENST00000417012 GYG1P46976 350 aa14.54□□□□□ -0.08
LRRTM1-205ENST00000417012 RBL2Q08999 1139 aa14.54□□□□□ -0.08
LRRTM1-205ENST00000417012 RAD51AP2Q09MP3 1159 aa14.54□□□□□ -0.08
LRRTM1-205ENST00000417012 RAD9BQ6WBX8 426 aa14.54□□□□□ -0.08
LRRTM1-205ENST00000417012 DHX37Q8IY37 1157 aaKnown RBP14.54□□□□□ -0.08
LRRTM1-205ENST00000417012 CPLX3Q8WVH0 158 aa14.54□□□□□ -0.08
LRRTM1-205ENST00000417012 CTAGE1Q96RT6 745 aa14.54□□□□□ -0.08
LRRTM1-205ENST00000417012 LRP2BPQ9P2M1 347 aa14.54□□□□□ -0.08
LRRTM1-205ENST00000417012 ABCF2Q9UG63 623 aa14.54□□□□□ -0.08
LRRTM1-205ENST00000417012 PUF60Q9UHX1 559 aaKnown RBP14.54□□□□□ -0.08
LRRTM1-205ENST00000417012 GSG1L2A8MUP6 293 aa14.54□□□□□ -0.08
LRRTM1-205ENST00000417012 TUBB2AQ13885 445 aa14.54□□□□□ -0.08
LRRTM1-205ENST00000417012 ADGRA1Q86SQ6 560 aa14.54□□□□□ -0.08
LRRTM1-205ENST00000417012 CCDC24Q8N4L8 307 aa14.54□□□□□ -0.08
LRRTM1-205ENST00000417012 EXOC4Q96A65 974 aa14.54□□□□□ -0.08
LRRTM1-205ENST00000417012 TRERF1Q96PN7 1200 aa14.54□□□□□ -0.08
LRRTM1-205ENST00000417012 TUBB2BQ9BVA1 445 aa14.54□□□□□ -0.08
LRRTM1-205ENST00000417012 CHD4Q14839 1912 aa14.54□□□□□ -0.08
LRRTM1-205ENST00000417012 ERLIN1O75477 346 aa14.53□□□□□ -0.08
LRRTM1-205ENST00000417012 SLC4A4Q9Y6R1 1079 aa14.53□□□□□ -0.08
LRRTM1-205ENST00000417012 SMIM22K7EJ46 135 aa14.53□□□□□ -0.08
LRRTM1-205ENST00000417012 MFAP3LO75121 409 aa14.53□□□□□ -0.08
LRRTM1-205ENST00000417012 TUBB4BP68371 445 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms