RNA–Protein interactions for RNA: ENST00000417004.5

PTPN20-209, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 5

Gene PTPN20, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-209ENST00000417004 USP17L18D6R9N7 530 aa23.1■■□□□ 1.29
PTPN20-209ENST00000417004 USP17L22D6RA61 530 aa23.1■■□□□ 1.29
PTPN20-209ENST00000417004 USP17L17D6RBQ6 530 aa23.1■■□□□ 1.29
PTPN20-209ENST00000417004 USP17L19D6RCP7 530 aa23.1■■□□□ 1.29
PTPN20-209ENST00000417004 USP17L20D6RJB6 530 aa23.1■■□□□ 1.29
PTPN20-209ENST00000417004 MAPK4P31152 587 aa23.1■■□□□ 1.29
PTPN20-209ENST00000417004 ERVK-9P63128 1117 aa23.1■■□□□ 1.29
PTPN20-209ENST00000417004 ERVK-24P63145 666 aa23.1■■□□□ 1.29
PTPN20-209ENST00000417004 USP17L24Q0WX57 530 aa23.1■■□□□ 1.29
PTPN20-209ENST00000417004 SOCS4Q8WXH5 440 aa23.1■■□□□ 1.29
PTPN20-209ENST00000417004 LRRCC1Q9C099 1032 aa23.1■■□□□ 1.29
PTPN20-209ENST00000417004 KIAA1683Q9H0B3 1180 aa23.1■■□□□ 1.29
PTPN20-209ENST00000417004 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.1■■□□□ 1.29
PTPN20-209ENST00000417004 GABPAQ06546 454 aa23.09■■□□□ 1.29
PTPN20-209ENST00000417004 HAUS7Q99871 368 aa23.09■■□□□ 1.29
PTPN20-209ENST00000417004 NUDT12Q9BQG2 462 aa23.09■■□□□ 1.29
PTPN20-209ENST00000417004 ARMT1Q9H993 441 aa23.09■■□□□ 1.29
PTPN20-209ENST00000417004 DCP1AQ9NPI6 582 aaPredicted RBP23.09■■□□□ 1.29
PTPN20-209ENST00000417004 MPHOSPH10O00566 681 aaKnown RBP23.08■■□□□ 1.29
PTPN20-209ENST00000417004 CYP2B6P20813 491 aa23.08■■□□□ 1.29
PTPN20-209ENST00000417004 ADD2P35612 726 aa23.08■■□□□ 1.29
PTPN20-209ENST00000417004 ACER1Q8TDN7 264 aa23.08■■□□□ 1.29
PTPN20-209ENST00000417004 MBD4O95243 580 aa23.07■■□□□ 1.28
PTPN20-209ENST00000417004 VCAM1P19320 739 aa23.07■■□□□ 1.28
PTPN20-209ENST00000417004 Q3C1V9 767 aa23.07■■□□□ 1.28
PTPN20-209ENST00000417004 CRISPLD2Q9H0B8 497 aa23.07■■□□□ 1.28
PTPN20-209ENST00000417004 CWC22Q9HCG8 908 aaKnown RBP23.07■■□□□ 1.28
PTPN20-209ENST00000417004 HMX1Q9NP08 348 aaPredicted RBP23.07■■□□□ 1.28
PTPN20-209ENST00000417004 PCDH10Q9P2E7 1040 aa23.07■■□□□ 1.28
PTPN20-209ENST00000417004 COLQQ9Y215 455 aaPredicted RBP23.07■■□□□ 1.28
PTPN20-209ENST00000417004 RPTORQ8N122 1335 aa23.07■■□□□ 1.28
PTPN20-209ENST00000417004 PLXNB2O15031 1838 aa23.06■■□□□ 1.28
PTPN20-209ENST00000417004 GUCY1A2P33402 732 aa23.06■■□□□ 1.28
PTPN20-209ENST00000417004 EVX2Q03828 476 aa23.06■■□□□ 1.28
PTPN20-209ENST00000417004 TRIM32Q13049 653 aa23.06■■□□□ 1.28
PTPN20-209ENST00000417004 SEPT2Q15019 361 aa23.06■■□□□ 1.28
PTPN20-209ENST00000417004 SLFNL1Q499Z3 407 aa23.06■■□□□ 1.28
PTPN20-209ENST00000417004 CATSPERGQ6ZRH7 1159 aa23.06■■□□□ 1.28
PTPN20-209ENST00000417004 TRIB2Q92519 343 aa23.06■■□□□ 1.28
PTPN20-209ENST00000417004 PORCNQ9H237 461 aa23.06■■□□□ 1.28
PTPN20-209ENST00000417004 SWAP70Q9UH65 585 aa23.06■■□□□ 1.28
PTPN20-209ENST00000417004 RABGAP1Q9Y3P9 1069 aa23.06■■□□□ 1.28
PTPN20-209ENST00000417004 SMARCA5O60264 1052 aaPredicted RBP23.05■■□□□ 1.28
PTPN20-209ENST00000417004 CYP2D6P10635 497 aa23.05■■□□□ 1.28
PTPN20-209ENST00000417004 XRCC5P13010 732 aaKnown RBP23.05■■□□□ 1.28
PTPN20-209ENST00000417004 GPR142Q7Z601 462 aa23.05■■□□□ 1.28
PTPN20-209ENST00000417004 PLEKHH3Q7Z736 793 aa23.05■■□□□ 1.28
PTPN20-209ENST00000417004 TRMT44Q8IYL2 757 aaKnown RBP23.05■■□□□ 1.28
PTPN20-209ENST00000417004 RPAP3Q9H6T3 665 aaPredicted RBP23.05■■□□□ 1.28
PTPN20-209ENST00000417004 ATP8A2Q9NTI2 1148 aa23.05■■□□□ 1.28
PTPN20-209ENST00000417004 NR2E3Q9Y5X4 410 aa23.05■■□□□ 1.28
PTPN20-209ENST00000417004 PRKAB2O43741 272 aa23.04■■□□□ 1.28
PTPN20-209ENST00000417004 CCNA1P78396 465 aa23.04■■□□□ 1.28
PTPN20-209ENST00000417004 POTEEQ6S8J3 1075 aa23.04■■□□□ 1.28
PTPN20-209ENST00000417004 AMOTL1Q8IY63 956 aa23.04■■□□□ 1.28
PTPN20-209ENST00000417004 CEP290O15078 2479 aa23.03■■□□□ 1.28
PTPN20-209ENST00000417004 CNMDO75829 334 aa23.03■■□□□ 1.28
PTPN20-209ENST00000417004 ZKSCAN1P17029 563 aaPredicted RBP23.03■■□□□ 1.28
PTPN20-209ENST00000417004 RGS2P41220 211 aa23.03■■□□□ 1.28
PTPN20-209ENST00000417004 UBE3CQ15386 1083 aa23.03■■□□□ 1.28
PTPN20-209ENST00000417004 ZSCAN25Q6NSZ9 544 aa23.03■■□□□ 1.28
PTPN20-209ENST00000417004 TMEM179Q6ZVK1 233 aa23.03■■□□□ 1.28
PTPN20-209ENST00000417004 SLC44A5Q8NCS7 719 aa23.03■■□□□ 1.28
PTPN20-209ENST00000417004 DDRGK1Q96HY6 314 aa23.03■■□□□ 1.28
PTPN20-209ENST00000417004 PRKAR2AP13861 404 aaKnown RBP23.02■■□□□ 1.28
PTPN20-209ENST00000417004 MORN1Q5T089 497 aa23.02■■□□□ 1.28
PTPN20-209ENST00000417004 CHRDL2Q6WN34 429 aa23.02■■□□□ 1.28
PTPN20-209ENST00000417004 LBX2Q6XYB7 198 aa23.02■■□□□ 1.28
PTPN20-209ENST00000417004 ANKLE1Q8NAG6 615 aa23.02■■□□□ 1.28
PTPN20-209ENST00000417004 USP6NLQ92738 828 aa23.02■■□□□ 1.28
PTPN20-209ENST00000417004 DYNLL2Q96FJ2 89 aa23.02■■□□□ 1.28
PTPN20-209ENST00000417004 PAWRQ96IZ0 340 aaKnown RBP23.02■■□□□ 1.28
PTPN20-209ENST00000417004 EVI5O60447 810 aa23.01■■□□□ 1.27
PTPN20-209ENST00000417004 GLRX3O76003 335 aaKnown RBP23.01■■□□□ 1.27
PTPN20-209ENST00000417004 CHGBP05060 677 aa23.01■■□□□ 1.27
PTPN20-209ENST00000417004 MAP3K21Q5TCX8 1036 aa23.01■■□□□ 1.27
PTPN20-209ENST00000417004 WDR78Q5VTH9 848 aa23.01■■□□□ 1.27
PTPN20-209ENST00000417004 NECAB2Q7Z6G3 386 aa23.01■■□□□ 1.27
PTPN20-209ENST00000417004 APBA2Q99767 749 aa23.01■■□□□ 1.27
PTPN20-209ENST00000417004 ECHDC1Q9NTX5 307 aa23.01■■□□□ 1.27
PTPN20-209ENST00000417004 SLC4A4Q9Y6R1 1079 aa23.01■■□□□ 1.27
PTPN20-209ENST00000417004 A0A1W2PRG0 241 aa23■■□□□ 1.27
PTPN20-209ENST00000417004 SPDYE16A6NNV3 312 aaPredicted RBP23■■□□□ 1.27
PTPN20-209ENST00000417004 DIS3LQ8TF46 1054 aaKnown RBP23■■□□□ 1.27
PTPN20-209ENST00000417004 GPATCH3Q96I76 525 aa23■■□□□ 1.27
PTPN20-209ENST00000417004 TANGO6Q9C0B7 1094 aa23■■□□□ 1.27
PTPN20-209ENST00000417004 FXR1P51114 621 aaKnown RBP eCLIP22.99■■□□□ 1.27
PTPN20-209ENST00000417004 C12orf60Q5U649 245 aa22.99■■□□□ 1.27
PTPN20-209ENST00000417004 ARHGEF10LQ9HCE6 1279 aa22.99■■□□□ 1.27
PTPN20-209ENST00000417004 BTBD7Q9P203 1132 aa22.99■■□□□ 1.27
PTPN20-209ENST00000417004 MYH7P12883 1935 aa22.99■■□□□ 1.27
PTPN20-209ENST00000417004 CYP2D7A0A087X1C5 515 aa22.98■■□□□ 1.27
PTPN20-209ENST00000417004 USP17L12C9JPN9 530 aa22.98■■□□□ 1.27
PTPN20-209ENST00000417004 USP17L21D6R901 530 aa22.98■■□□□ 1.27
PTPN20-209ENST00000417004 AKR1B1P15121 316 aa22.98■■□□□ 1.27
PTPN20-209ENST00000417004 ICA1Q05084 483 aa22.98■■□□□ 1.27
PTPN20-209ENST00000417004 CACNB2Q08289 660 aaPredicted RBP22.98■■□□□ 1.27
PTPN20-209ENST00000417004 MAP2K5Q13163 448 aa22.98■■□□□ 1.27
PTPN20-209ENST00000417004 CCL14Q16627 93 aa22.98■■□□□ 1.27
PTPN20-209ENST00000417004 CCDC17Q96LX7 622 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms