RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 LRP5O75197 1615 aa23.14■■□□□ 1.3
AP1S3-205ENST00000415298 CDCA2Q69YH5 1023 aaPredicted RBP23.14■■□□□ 1.29
AP1S3-205ENST00000415298 RMI1Q9H9A7 625 aa23.14■■□□□ 1.29
AP1S3-205ENST00000415298 CBX8Q9HC52 389 aa23.14■■□□□ 1.29
AP1S3-205ENST00000415298 PPP1R1BQ9UD71 204 aaPredicted RBP23.14■■□□□ 1.29
AP1S3-205ENST00000415298 COL11A2P13942 1736 aaPredicted RBP23.13■■□□□ 1.29
AP1S3-205ENST00000415298 ADORA1P30542 326 aa23.13■■□□□ 1.29
AP1S3-205ENST00000415298 WWC3Q9ULE0 1092 aa23.13■■□□□ 1.29
AP1S3-205ENST00000415298 MROH5Q6ZUA9 1318 aa23.13■■□□□ 1.29
AP1S3-205ENST00000415298 CCDC69A6NI79 296 aa23.13■■□□□ 1.29
AP1S3-205ENST00000415298 LRRFIP1Q32MZ4 808 aaKnown RBP23.13■■□□□ 1.29
AP1S3-205ENST00000415298 TCP11Q8WWU5 503 aa23.13■■□□□ 1.29
AP1S3-205ENST00000415298 CNPY2Q9Y2B0 182 aa23.13■■□□□ 1.29
AP1S3-205ENST00000415298 A0A0G2JLW4 131 aa23.12■■□□□ 1.29
AP1S3-205ENST00000415298 H0YIN7 160 aa23.12■■□□□ 1.29
AP1S3-205ENST00000415298 ARID5BQ14865 1188 aa23.12■■□□□ 1.29
AP1S3-205ENST00000415298 ISM2Q6H9L7 571 aa23.12■■□□□ 1.29
AP1S3-205ENST00000415298 AMOTL1Q8IY63 956 aa23.12■■□□□ 1.29
AP1S3-205ENST00000415298 PHLPP2Q6ZVD8 1323 aa23.12■■□□□ 1.29
AP1S3-205ENST00000415298 GSPT1P15170 499 aaKnown RBP23.12■■□□□ 1.29
AP1S3-205ENST00000415298 NPR1P16066 1061 aa23.12■■□□□ 1.29
AP1S3-205ENST00000415298 RCSD1Q6JBY9 416 aa23.12■■□□□ 1.29
AP1S3-205ENST00000415298 PROCA1Q8NCQ7 364 aaPredicted RBP23.12■■□□□ 1.29
AP1S3-205ENST00000415298 MASTLQ96GX5 879 aa23.12■■□□□ 1.29
AP1S3-205ENST00000415298 CRAMP1Q96RY5 1269 aa23.12■■□□□ 1.29
AP1S3-205ENST00000415298 TTC41PQ6P2S7 1318 aa23.11■■□□□ 1.29
AP1S3-205ENST00000415298 CCDC151A5D8V7 595 aa23.11■■□□□ 1.29
AP1S3-205ENST00000415298 SLC8A3P57103 927 aa23.11■■□□□ 1.29
AP1S3-205ENST00000415298 TYRO3Q06418 890 aa23.11■■□□□ 1.29
AP1S3-205ENST00000415298 MRFAP1L1Q96HT8 127 aa23.11■■□□□ 1.29
AP1S3-205ENST00000415298 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.11■■□□□ 1.29
AP1S3-205ENST00000415298 EBAG9O00559 213 aa23.1■■□□□ 1.29
AP1S3-205ENST00000415298 MAP4K4O95819 1239 aaPredicted RBP23.1■■□□□ 1.29
AP1S3-205ENST00000415298 OATP04181 439 aa23.1■■□□□ 1.29
AP1S3-205ENST00000415298 MYLK4Q86YV6 388 aaPredicted RBP23.1■■□□□ 1.29
AP1S3-205ENST00000415298 XAGE2Q96GT9 111 aa23.1■■□□□ 1.29
AP1S3-205ENST00000415298 PLEKHG4BQ96PX9 1271 aa23.1■■□□□ 1.29
AP1S3-205ENST00000415298 CARD6Q9BX69 1037 aa23.1■■□□□ 1.29
AP1S3-205ENST00000415298 RANBP17Q9H2T7 1088 aaKnown RBP23.1■■□□□ 1.29
AP1S3-205ENST00000415298 C10orf71Q711Q0 1435 aa23.1■■□□□ 1.29
AP1S3-205ENST00000415298 SKAP2O75563 359 aaPredicted RBP23.1■■□□□ 1.29
AP1S3-205ENST00000415298 FAM71BQ8TC56 605 aa23.1■■□□□ 1.29
AP1S3-205ENST00000415298 PPP1R13BQ96KQ4 1090 aa23.1■■□□□ 1.29
AP1S3-205ENST00000415298 PARD6BQ9BYG5 372 aa23.1■■□□□ 1.29
AP1S3-205ENST00000415298 GPR108Q9NPR9 543 aa23.1■■□□□ 1.29
AP1S3-205ENST00000415298 PES1O00541 588 aaKnown RBP23.09■■□□□ 1.29
AP1S3-205ENST00000415298 ZNF609O15014 1411 aa23.09■■□□□ 1.29
AP1S3-205ENST00000415298 RTN3O95197 1032 aaPredicted RBP23.09■■□□□ 1.29
AP1S3-205ENST00000415298 BRD3Q15059 726 aa23.09■■□□□ 1.29
AP1S3-205ENST00000415298 SPDYE1Q8NFV5 336 aaPredicted RBP23.09■■□□□ 1.29
AP1S3-205ENST00000415298 PI4K2BQ8TCG2 481 aa23.09■■□□□ 1.29
AP1S3-205ENST00000415298 OSBPL3Q9H4L5 887 aa23.09■■□□□ 1.29
AP1S3-205ENST00000415298 ZNF219Q9P2Y4 722 aaPredicted RBP23.09■■□□□ 1.29
AP1S3-205ENST00000415298 STAP2Q9UGK3 403 aa23.09■■□□□ 1.29
AP1S3-205ENST00000415298 DNAI1Q9UI46 699 aa23.09■■□□□ 1.29
AP1S3-205ENST00000415298 NDUFB9Q9Y6M9 179 aa23.09■■□□□ 1.29
AP1S3-205ENST00000415298 FGFR2P21802 821 aa23.09■■□□□ 1.29
AP1S3-205ENST00000415298 HDXQ7Z353 690 aa23.09■■□□□ 1.29
AP1S3-205ENST00000415298 CAPN7Q9Y6W3 813 aa23.09■■□□□ 1.29
AP1S3-205ENST00000415298 BBOX1O75936 387 aa23.08■■□□□ 1.29
AP1S3-205ENST00000415298 DPEP1P16444 411 aa23.08■■□□□ 1.29
AP1S3-205ENST00000415298 NAA25Q14CX7 972 aa23.08■■□□□ 1.29
AP1S3-205ENST00000415298 SLX1AQ9BQ83 275 aa23.08■■□□□ 1.29
AP1S3-205ENST00000415298 EPC1Q9H2F5 836 aa23.08■■□□□ 1.29
AP1S3-205ENST00000415298 TPD52L2O43399 206 aaKnown RBP23.08■■□□□ 1.28
AP1S3-205ENST00000415298 KCNA3P22001 575 aa23.08■■□□□ 1.28
AP1S3-205ENST00000415298 PEX19P40855 299 aa23.08■■□□□ 1.28
AP1S3-205ENST00000415298 DHX8Q14562 1220 aaKnown RBP23.08■■□□□ 1.28
AP1S3-205ENST00000415298 TTC22Q5TAA0 569 aa23.08■■□□□ 1.28
AP1S3-205ENST00000415298 ECHDC1Q9NTX5 307 aa23.08■■□□□ 1.28
AP1S3-205ENST00000415298 CACNA1SQ13698 1873 aa23.07■■□□□ 1.28
AP1S3-205ENST00000415298 FRMD3A2A2Y4 597 aa23.07■■□□□ 1.28
AP1S3-205ENST00000415298 KLRK1P26718 216 aa23.07■■□□□ 1.28
AP1S3-205ENST00000415298 ALDH1B1P30837 517 aa23.07■■□□□ 1.28
AP1S3-205ENST00000415298 FNTAP49354 379 aa23.07■■□□□ 1.28
AP1S3-205ENST00000415298 PUM3Q15397 648 aaKnown RBP23.07■■□□□ 1.28
AP1S3-205ENST00000415298 MAP3K11Q16584 847 aa23.07■■□□□ 1.28
AP1S3-205ENST00000415298 MYSM1Q5VVJ2 828 aa23.07■■□□□ 1.28
AP1S3-205ENST00000415298 CEP112Q8N8E3 955 aa23.07■■□□□ 1.28
AP1S3-205ENST00000415298 GOLGA6CA6NDK9 693 aa23.07■■□□□ 1.28
AP1S3-205ENST00000415298 GOLGA6BA6NDN3 693 aa23.07■■□□□ 1.28
AP1S3-205ENST00000415298 PPEF1O14829 653 aaPredicted RBP23.07■■□□□ 1.28
AP1S3-205ENST00000415298 ZSCAN9O15535 394 aaPredicted RBP23.07■■□□□ 1.28
AP1S3-205ENST00000415298 GOLGA6DP0CG33 693 aa23.07■■□□□ 1.28
AP1S3-205ENST00000415298 ATP2B2Q01814 1243 aa23.07■■□□□ 1.28
AP1S3-205ENST00000415298 SPDL1Q96EA4 605 aa23.07■■□□□ 1.28
AP1S3-205ENST00000415298 CLIC6Q96NY7 704 aa23.07■■□□□ 1.28
AP1S3-205ENST00000415298 GPR101Q96P66 508 aaPredicted RBP23.07■■□□□ 1.28
AP1S3-205ENST00000415298 BOLA2Q9H3K6 86 aa23.07■■□□□ 1.28
AP1S3-205ENST00000415298 GOLGA6AQ9NYA3 693 aa23.07■■□□□ 1.28
AP1S3-205ENST00000415298 ANKIB1Q9P2G1 1089 aa23.07■■□□□ 1.28
AP1S3-205ENST00000415298 MYO6Q9UM54 1294 aa23.07■■□□□ 1.28
AP1S3-205ENST00000415298 PYGBP11216 843 aa23.06■■□□□ 1.28
AP1S3-205ENST00000415298 ETF1P62495 437 aaKnown RBP23.06■■□□□ 1.28
AP1S3-205ENST00000415298 MCM6Q14566 821 aa23.06■■□□□ 1.28
AP1S3-205ENST00000415298 TLDC1Q6P9B6 456 aa23.06■■□□□ 1.28
AP1S3-205ENST00000415298 RABGGTAQ92696 567 aa23.06■■□□□ 1.28
AP1S3-205ENST00000415298 GPSM2P81274 684 aa23.06■■□□□ 1.28
AP1S3-205ENST00000415298 ANO6Q4KMQ2 910 aa23.06■■□□□ 1.28
AP1S3-205ENST00000415298 HSP90B2PQ58FF3 399 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms