RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 MAP4K4O95819 1239 aaPredicted RBP16.61■□□□□ 0.25
RAPGEF1-204ENST00000414781 CYBAP13498 195 aa16.61■□□□□ 0.25
RAPGEF1-204ENST00000414781 RAG1P15918 1043 aa16.61■□□□□ 0.25
RAPGEF1-204ENST00000414781 TLE2Q04725 743 aa16.61■□□□□ 0.25
RAPGEF1-204ENST00000414781 ITPRIPQ8IWB1 547 aa16.61■□□□□ 0.25
RAPGEF1-204ENST00000414781 TMEM57Q8N5G2 664 aa16.61■□□□□ 0.25
RAPGEF1-204ENST00000414781 PRDM12Q9H4Q4 367 aa16.61■□□□□ 0.25
RAPGEF1-204ENST00000414781 BICC1Q9H694 974 aaKnown RBP16.61■□□□□ 0.25
RAPGEF1-204ENST00000414781 HERC5Q9UII4 1024 aaKnown RBP16.61■□□□□ 0.25
RAPGEF1-204ENST00000414781 RABGAP1Q9Y3P9 1069 aa16.61■□□□□ 0.25
RAPGEF1-204ENST00000414781 IVNS1ABPQ9Y6Y0 642 aa16.61■□□□□ 0.25
RAPGEF1-204ENST00000414781 RLFQ13129 1914 aa16.6■□□□□ 0.25
RAPGEF1-204ENST00000414781 CACNA1FO60840 1977 aa16.6■□□□□ 0.25
RAPGEF1-204ENST00000414781 ASNSP08243 561 aa16.6■□□□□ 0.25
RAPGEF1-204ENST00000414781 BTDP43251 543 aa16.6■□□□□ 0.25
RAPGEF1-204ENST00000414781 C20orf194Q5TEA3 1177 aa16.6■□□□□ 0.25
RAPGEF1-204ENST00000414781 CCDC174Q6PII3 467 aa16.6■□□□□ 0.25
RAPGEF1-204ENST00000414781 COG6Q9Y2V7 657 aa16.6■□□□□ 0.25
RAPGEF1-204ENST00000414781 RLBP1P12271 317 aa16.59■□□□□ 0.25
RAPGEF1-204ENST00000414781 BMP1P13497 986 aa16.59■□□□□ 0.25
RAPGEF1-204ENST00000414781 PTPREP23469 700 aa16.59■□□□□ 0.25
RAPGEF1-204ENST00000414781 CYP2C19P33261 490 aa16.59■□□□□ 0.25
RAPGEF1-204ENST00000414781 ADCYAP1R1P41586 468 aa16.59■□□□□ 0.25
RAPGEF1-204ENST00000414781 TRPV1Q8NER1 839 aa16.59■□□□□ 0.25
RAPGEF1-204ENST00000414781 NECAB3Q96P71 396 aaPredicted RBP16.59■□□□□ 0.25
RAPGEF1-204ENST00000414781 GINM1Q9NU53 330 aa16.59■□□□□ 0.25
RAPGEF1-204ENST00000414781 USP17L10C9JJH3 530 aa16.58■□□□□ 0.24
RAPGEF1-204ENST00000414781 SEPT4O43236 478 aa16.58■□□□□ 0.24
RAPGEF1-204ENST00000414781 NBPF7P0C2Y1 421 aaPredicted RBP16.58■□□□□ 0.24
RAPGEF1-204ENST00000414781 ITGB8P26012 769 aa16.58■□□□□ 0.24
RAPGEF1-204ENST00000414781 GRB14Q14449 540 aa16.58■□□□□ 0.24
RAPGEF1-204ENST00000414781 CCDC85BQ15834 202 aaPredicted RBP16.58■□□□□ 0.24
RAPGEF1-204ENST00000414781 SPTY2D1Q68D10 685 aaPredicted RBP16.58■□□□□ 0.24
RAPGEF1-204ENST00000414781 ALYREFQ86V81 257 aaKnown RBP16.58■□□□□ 0.24
RAPGEF1-204ENST00000414781 ANKRD44Q8N8A2 993 aa16.58■□□□□ 0.24
RAPGEF1-204ENST00000414781 CRBNQ96SW2 442 aa16.58■□□□□ 0.24
RAPGEF1-204ENST00000414781 MROH7-TTC4A0A0A0MT08 1334 aa16.58■□□□□ 0.24
RAPGEF1-204ENST00000414781 MYH13Q9UKX3 1938 aa16.58■□□□□ 0.24
RAPGEF1-204ENST00000414781 IGHA2P01877 340 aa16.57■□□□□ 0.24
RAPGEF1-204ENST00000414781 GNAI3P08754 354 aa16.57■□□□□ 0.24
RAPGEF1-204ENST00000414781 IGFBP4P22692 258 aa16.57■□□□□ 0.24
RAPGEF1-204ENST00000414781 IRX6P78412 446 aaPredicted RBP16.57■□□□□ 0.24
RAPGEF1-204ENST00000414781 WDR78Q5VTH9 848 aa16.57■□□□□ 0.24
RAPGEF1-204ENST00000414781 OLFML2BQ68BL8 750 aa16.57■□□□□ 0.24
RAPGEF1-204ENST00000414781 CCDC129Q6ZRS4 1044 aa16.57■□□□□ 0.24
RAPGEF1-204ENST00000414781 PBX4Q9BYU1 374 aa16.57■□□□□ 0.24
RAPGEF1-204ENST00000414781 TNNQ9UQP3 1299 aa16.57■□□□□ 0.24
RAPGEF1-204ENST00000414781 PDS5AQ29RF7 1337 aaKnown RBP16.56■□□□□ 0.24
RAPGEF1-204ENST00000414781 GPR75-ASB3A0A0A6YYF3 556 aa16.56■□□□□ 0.24
RAPGEF1-204ENST00000414781 EYA2O00167 538 aa16.56■□□□□ 0.24
RAPGEF1-204ENST00000414781 GPR37L1O60883 481 aa16.56■□□□□ 0.24
RAPGEF1-204ENST00000414781 MYCNP04198 464 aaPredicted RBP16.56■□□□□ 0.24
RAPGEF1-204ENST00000414781 RHBDL3P58872 404 aa16.56■□□□□ 0.24
RAPGEF1-204ENST00000414781 ADGRE1Q14246 886 aa16.56■□□□□ 0.24
RAPGEF1-204ENST00000414781 RRP1BQ14684 758 aaKnown RBP16.56■□□□□ 0.24
RAPGEF1-204ENST00000414781 LRRC41Q15345 812 aa16.56■□□□□ 0.24
RAPGEF1-204ENST00000414781 RAB30Q15771 203 aa16.56■□□□□ 0.24
RAPGEF1-204ENST00000414781 KLHDC4Q8TBB5 520 aa16.56■□□□□ 0.24
RAPGEF1-204ENST00000414781 FERMT2Q96AC1 680 aa16.56■□□□□ 0.24
RAPGEF1-204ENST00000414781 EPHX3Q9H6B9 360 aa16.56■□□□□ 0.24
RAPGEF1-204ENST00000414781 TMEM39AQ9NV64 488 aa16.56■□□□□ 0.24
RAPGEF1-204ENST00000414781 PHF24Q9UPV7 400 aa16.56■□□□□ 0.24
RAPGEF1-204ENST00000414781 ATP2B3Q16720 1220 aa16.55■□□□□ 0.24
RAPGEF1-204ENST00000414781 MSRAQ9UJ68 235 aa16.55■□□□□ 0.24
RAPGEF1-204ENST00000414781 USP17L2Q6R6M4 530 aa16.54■□□□□ 0.24
RAPGEF1-204ENST00000414781 EXOC6Q8TAG9 804 aa16.54■□□□□ 0.24
RAPGEF1-204ENST00000414781 NPLOC4Q8TAT6 608 aa16.54■□□□□ 0.24
RAPGEF1-204ENST00000414781 TOX2Q96NM4 488 aa16.54■□□□□ 0.24
RAPGEF1-204ENST00000414781 PI4KBQ9UBF8 816 aa16.54■□□□□ 0.24
RAPGEF1-204ENST00000414781 NDUFB9Q9Y6M9 179 aa16.54■□□□□ 0.24
RAPGEF1-204ENST00000414781 USP17L15C9J2P7 530 aa16.53■□□□□ 0.24
RAPGEF1-204ENST00000414781 USP17L13C9JLJ4 530 aa16.53■□□□□ 0.24
RAPGEF1-204ENST00000414781 USP17L11C9JVI0 530 aa16.53■□□□□ 0.24
RAPGEF1-204ENST00000414781 USP17L18D6R9N7 530 aa16.53■□□□□ 0.24
RAPGEF1-204ENST00000414781 USP17L22D6RA61 530 aa16.53■□□□□ 0.24
RAPGEF1-204ENST00000414781 USP17L17D6RBQ6 530 aa16.53■□□□□ 0.24
RAPGEF1-204ENST00000414781 USP17L19D6RCP7 530 aa16.53■□□□□ 0.24
RAPGEF1-204ENST00000414781 USP17L20D6RJB6 530 aa16.53■□□□□ 0.24
RAPGEF1-204ENST00000414781 PQBP1O60828 265 aaKnown RBP16.53■□□□□ 0.24
RAPGEF1-204ENST00000414781 CNMDO75829 334 aa16.53■□□□□ 0.24
RAPGEF1-204ENST00000414781 PBX2P40425 430 aa16.53■□□□□ 0.24
RAPGEF1-204ENST00000414781 USP17L24Q0WX57 530 aa16.53■□□□□ 0.24
RAPGEF1-204ENST00000414781 PPIGQ13427 754 aaKnown RBP eCLIP16.53■□□□□ 0.242e-6■■■□□ 15.1
RAPGEF1-204ENST00000414781 RASIP1Q5U651 963 aa16.53■□□□□ 0.24
RAPGEF1-204ENST00000414781 DPP9Q86TI2 863 aa16.53■□□□□ 0.24
RAPGEF1-204ENST00000414781 SLC44A5Q8NCS7 719 aa16.53■□□□□ 0.24
RAPGEF1-204ENST00000414781 HERVK_113Q902F9 699 aa16.53■□□□□ 0.24
RAPGEF1-204ENST00000414781 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.53■□□□□ 0.241e-7■■■□□ 15.9
RAPGEF1-204ENST00000414781 DHX36Q9H2U1 1008 aaKnown RBP16.53■□□□□ 0.24
RAPGEF1-204ENST00000414781 ABCF2Q9UG63 623 aa16.53■□□□□ 0.24
RAPGEF1-204ENST00000414781 MYH2Q9UKX2 1941 aa16.53■□□□□ 0.24
RAPGEF1-204ENST00000414781 DCDC2CA8MYV0 355 aa16.52■□□□□ 0.24
RAPGEF1-204ENST00000414781 ERC2O15083 957 aa16.52■□□□□ 0.24
RAPGEF1-204ENST00000414781 UBTFL1P0CB47 393 aaPredicted RBP16.52■□□□□ 0.24
RAPGEF1-204ENST00000414781 PHKA1P46020 1223 aa16.52■□□□□ 0.24
RAPGEF1-204ENST00000414781 GSTO1P78417 241 aa16.52■□□□□ 0.24
RAPGEF1-204ENST00000414781 LBX2Q6XYB7 198 aa16.52■□□□□ 0.24
RAPGEF1-204ENST00000414781 ANKRD33Q7Z3H0 272 aa16.52■□□□□ 0.24
RAPGEF1-204ENST00000414781 USP44Q9H0E7 712 aa16.52■□□□□ 0.24
RAPGEF1-204ENST00000414781 EMILIN3Q9NT22 766 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms