RNA–Protein interactions for RNA: ENST00000414099.6

SCN5A-204, Transcript of sodium voltage-gated channel alpha subunit 5, human

TSL 1 (best) BASIC

Gene SCN5A, Length 8,303 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCN5A-204	ENST00000414099	LRRC2	Q9BYS8	371 aa		11.78	□□□□□ -0.52
SCN5A-204	ENST00000414099	RAB17	Q9H0T7	212 aa		11.78	□□□□□ -0.52
SCN5A-204	ENST00000414099	GDPD2	Q9HCC8	539 aa		11.78	□□□□□ -0.52
SCN5A-204	ENST00000414099	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	11.78	□□□□□ -0.52
SCN5A-204	ENST00000414099	DCPS	Q96C86	337 aa	Known RBP	11.78	□□□□□ -0.52
SCN5A-204	ENST00000414099	PPAN	Q9NQ55	473 aa	Known RBP	11.78	□□□□□ -0.52
SCN5A-204	ENST00000414099	RNF216	Q9NWF9	866 aa	Predicted RBP	11.78	□□□□□ -0.52
SCN5A-204	ENST00000414099	TLDC2	A0PJX2	215 aa		11.78	□□□□□ -0.52
SCN5A-204	ENST00000414099	MYCL	P12524	364 aa	Predicted RBP	11.78	□□□□□ -0.52
SCN5A-204	ENST00000414099	MCF2L2	Q86YR7	1114 aa		11.78	□□□□□ -0.52
SCN5A-204	ENST00000414099	VWA3A	A6NCI4	1184 aa		11.78	□□□□□ -0.52
SCN5A-204	ENST00000414099	WDR46	O15213	610 aa	Known RBP	11.78	□□□□□ -0.52
SCN5A-204	ENST00000414099	SLC17A8	Q8NDX2	589 aa		11.78	□□□□□ -0.52
SCN5A-204	ENST00000414099	DNAJC25	Q9H1X3	360 aa		11.78	□□□□□ -0.52
SCN5A-204	ENST00000414099	DACT1	Q9NYF0	836 aa		11.78	□□□□□ -0.52
SCN5A-204	ENST00000414099	DNAJC8	O75937	253 aa	Predicted RBP	11.77	□□□□□ -0.52
SCN5A-204	ENST00000414099	HAUS1	Q96CS2	278 aa		11.77	□□□□□ -0.52
SCN5A-204	ENST00000414099	SLC12A2	P55011	1212 aa		11.77	□□□□□ -0.52
SCN5A-204	ENST00000414099	TSHZ3	Q63HK5	1081 aa		11.77	□□□□□ -0.52
SCN5A-204	ENST00000414099	SND1	Q7KZF4	910 aa	Known RBP eCLIP	11.77	□□□□□ -0.52
SCN5A-204	ENST00000414099	DCTPP1	Q9H773	170 aa		11.77	□□□□□ -0.52
SCN5A-204	ENST00000414099	ARPP21	Q9UBL0	812 aa	Predicted RBP	11.77	□□□□□ -0.52
SCN5A-204	ENST00000414099	POLK	Q9UBT6	870 aa		11.77	□□□□□ -0.52
SCN5A-204	ENST00000414099	PPIP5K2	O43314	1243 aa		11.77	□□□□□ -0.53
SCN5A-204	ENST00000414099	ELMSAN1	Q6PJG2	1045 aa		11.77	□□□□□ -0.53
SCN5A-204	ENST00000414099	KRT26	Q7Z3Y9	468 aa		11.77	□□□□□ -0.53
SCN5A-204	ENST00000414099	ARHGEF2	Q92974	986 aa	Known RBP	11.77	□□□□□ -0.53
SCN5A-204	ENST00000414099	RPGRIP1	Q96KN7	1286 aa		11.77	□□□□□ -0.53
SCN5A-204	ENST00000414099	APBA3	O96018	575 aa		11.77	□□□□□ -0.53
SCN5A-204	ENST00000414099	TMOD1	P28289	359 aa		11.77	□□□□□ -0.53
SCN5A-204	ENST00000414099	PAK2	Q13177	524 aa		11.77	□□□□□ -0.53
SCN5A-204	ENST00000414099	EXOC8	Q8IYI6	725 aa		11.77	□□□□□ -0.53
SCN5A-204	ENST00000414099	SLC52A2	Q9HAB3	445 aa		11.77	□□□□□ -0.53
SCN5A-204	ENST00000414099	GRK7	Q8WTQ7	553 aa		11.77	□□□□□ -0.53
SCN5A-204	ENST00000414099	AFG3L2	Q9Y4W6	797 aa		11.77	□□□□□ -0.53
SCN5A-204	ENST00000414099	ZNF131	P52739	623 aa		11.77	□□□□□ -0.53
SCN5A-204	ENST00000414099	AKNAD1	Q5T1N1	836 aa		11.77	□□□□□ -0.53
SCN5A-204	ENST00000414099	THEG	Q9P2T0	379 aa		11.77	□□□□□ -0.53
SCN5A-204	ENST00000414099	PLCB4	Q15147	1175 aa		11.77	□□□□□ -0.53
SCN5A-204	ENST00000414099	CCDC38	Q502W7	563 aa		11.77	□□□□□ -0.53
SCN5A-204	ENST00000414099	TRIM37	O94972	964 aa		11.76	□□□□□ -0.53
SCN5A-204	ENST00000414099	SLC9C1	Q4G0N8	1177 aa		11.76	□□□□□ -0.53
SCN5A-204	ENST00000414099	UTP14C	Q5TAP6	766 aa	Known RBP	11.76	□□□□□ -0.53
SCN5A-204	ENST00000414099	NUP153	P49790	1475 aa	Known RBP	11.76	□□□□□ -0.53
SCN5A-204	ENST00000414099	PC	P11498	1178 aa	Known RBP	11.76	□□□□□ -0.53
SCN5A-204	ENST00000414099	CEP85	Q6P2H3	762 aa		11.76	□□□□□ -0.53
SCN5A-204	ENST00000414099	SULF1	Q8IWU6	871 aa		11.76	□□□□□ -0.53
SCN5A-204	ENST00000414099	CNKSR1	Q969H4	720 aa		11.76	□□□□□ -0.53
SCN5A-204	ENST00000414099	EAPP	Q56P03	285 aa	Predicted RBP	11.76	□□□□□ -0.53
SCN5A-204	ENST00000414099	CTNND2	Q9UQB3	1225 aa		11.76	□□□□□ -0.53
SCN5A-204	ENST00000414099	APOBR	Q0VD83	1088 aa		11.76	□□□□□ -0.53
SCN5A-204	ENST00000414099	PRR16	Q569H4	304 aa		11.76	□□□□□ -0.53
SCN5A-204	ENST00000414099	C20orf194	Q5TEA3	1177 aa		11.76	□□□□□ -0.53
SCN5A-204	ENST00000414099	TRPC6	Q9Y210	931 aa		11.76	□□□□□ -0.53
SCN5A-204	ENST00000414099	KDM5C	P41229	1560 aa		11.76	□□□□□ -0.53
SCN5A-204	ENST00000414099	RFC1	P35251	1148 aa	Predicted RBP	11.76	□□□□□ -0.53
SCN5A-204	ENST00000414099	KRT9	P35527	623 aa		11.76	□□□□□ -0.53
SCN5A-204	ENST00000414099	ZNF772	Q68DY9	489 aa	Predicted RBP	11.76	□□□□□ -0.53
SCN5A-204	ENST00000414099	TMC4	Q7Z404	712 aa		11.76	□□□□□ -0.53
SCN5A-204	ENST00000414099	SLFN12	Q8IYM2	578 aa		11.76	□□□□□ -0.53
SCN5A-204	ENST00000414099	RBSN	Q9H1K0	784 aa		11.76	□□□□□ -0.53
SCN5A-204	ENST00000414099	HARS	P12081	509 aa	Known RBP	11.76	□□□□□ -0.53
SCN5A-204	ENST00000414099	INPP5B	P32019	993 aa		11.76	□□□□□ -0.53
SCN5A-204	ENST00000414099	RUNDC3B	Q96NL0	473 aa		11.76	□□□□□ -0.53
SCN5A-204	ENST00000414099	RHOXF2B	P0C7M4	288 aa		11.75	□□□□□ -0.53
SCN5A-204	ENST00000414099	TROVE2	P10155	538 aa	Known RBP eCLIP	11.75	□□□□□ -0.53
SCN5A-204	ENST00000414099	ARHGEF16	Q5VV41	709 aa		11.75	□□□□□ -0.53
SCN5A-204	ENST00000414099	HELB	Q8NG08	1087 aa	Predicted RBP	11.75	□□□□□ -0.53
SCN5A-204	ENST00000414099	PSPC1	Q8WXF1	523 aa	Known RBP	11.75	□□□□□ -0.53
SCN5A-204	ENST00000414099	RHOXF2	Q9BQY4	288 aa		11.75	□□□□□ -0.53
SCN5A-204	ENST00000414099	ADPGK	Q9BRR6	497 aa		11.75	□□□□□ -0.53
SCN5A-204	ENST00000414099	LZTFL1	Q9NQ48	299 aa		11.75	□□□□□ -0.53
SCN5A-204	ENST00000414099	FLOT1	O75955	427 aa		11.75	□□□□□ -0.53
SCN5A-204	ENST00000414099	DCUN1D2	Q6PH85	259 aa		11.75	□□□□□ -0.53
SCN5A-204	ENST00000414099	ZBTB8OS	Q8IWT0	167 aa		11.75	□□□□□ -0.53
SCN5A-204	ENST00000414099	IFNK	Q9P0W0	207 aa		11.75	□□□□□ -0.53
SCN5A-204	ENST00000414099	IPO11	Q9UI26	975 aa	Known RBP	11.75	□□□□□ -0.53
SCN5A-204	ENST00000414099	DENND2C	Q68D51	928 aa		11.75	□□□□□ -0.53
SCN5A-204	ENST00000414099	PDZD4	Q76G19	769 aa	Predicted RBP	11.75	□□□□□ -0.53
SCN5A-204	ENST00000414099	C8orf58	Q8NAV2	365 aa		11.75	□□□□□ -0.53
SCN5A-204	ENST00000414099	FAM193B	Q96PV7	902 aa	Predicted RBP	11.75	□□□□□ -0.53
SCN5A-204	ENST00000414099	MRPL44	Q9H9J2	332 aa	Known RBP	11.75	□□□□□ -0.53
SCN5A-204	ENST00000414099	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	11.75	□□□□□ -0.53
SCN5A-204	ENST00000414099	ARHGEF37	A1IGU5	675 aa		11.75	□□□□□ -0.53
SCN5A-204	ENST00000414099	CCNA1	P78396	465 aa		11.75	□□□□□ -0.53
SCN5A-204	ENST00000414099	PDE4D	Q08499	809 aa		11.75	□□□□□ -0.53
SCN5A-204	ENST00000414099	PROCA1	Q8NCQ7	364 aa	Predicted RBP	11.75	□□□□□ -0.53
SCN5A-204	ENST00000414099	PPFIA4	O75335	1185 aa		11.75	□□□□□ -0.53
SCN5A-204	ENST00000414099	ATP2B4	P23634	1241 aa		11.75	□□□□□ -0.53
SCN5A-204	ENST00000414099	CCDC170	Q8IYT3	715 aa		11.75	□□□□□ -0.53
SCN5A-204	ENST00000414099	DDX27	Q96GQ7	796 aa	Known RBP	11.75	□□□□□ -0.53
SCN5A-204	ENST00000414099	EIF2A	Q9BY44	585 aa	Known RBP	11.75	□□□□□ -0.53
SCN5A-204	ENST00000414099	CUTA	O60888	179 aa		11.75	□□□□□ -0.53
SCN5A-204	ENST00000414099	CSRNP1	Q96S65	589 aa		11.75	□□□□□ -0.53
SCN5A-204	ENST00000414099	MRPL11	Q9Y3B7	192 aa	Known RBP	11.75	□□□□□ -0.53
SCN5A-204	ENST00000414099	SBNO2	Q9Y2G9	1366 aa		11.75	□□□□□ -0.53
SCN5A-204	ENST00000414099	SYNRG	Q9UMZ2	1314 aa		11.75	□□□□□ -0.53
SCN5A-204	ENST00000414099	TYW5	A2RUC4	315 aa	Known RBP	11.75	□□□□□ -0.53
SCN5A-204	ENST00000414099	N4BP1	O75113	896 aa	Known RBP	11.75	□□□□□ -0.53
SCN5A-204	ENST00000414099	RPS6KB1	P23443	525 aa		11.75	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms