RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 ZMYND8Q9ULU4 1186 aaPredicted RBP10.18□□□□□ -0.78
UPF3AP1-201ENST00000413731 TNNQ9UQP3 1299 aa10.18□□□□□ -0.78
UPF3AP1-201ENST00000413731 PDS5AQ29RF7 1337 aaKnown RBP10.17□□□□□ -0.78
UPF3AP1-201ENST00000413731 HMGCRP04035 888 aa10.17□□□□□ -0.78
UPF3AP1-201ENST00000413731 RHBDL3P58872 404 aa10.17□□□□□ -0.78
UPF3AP1-201ENST00000413731 TYW1BQ6NUM6 668 aa10.17□□□□□ -0.78
UPF3AP1-201ENST00000413731 NECAB2Q7Z6G3 386 aa10.17□□□□□ -0.78
UPF3AP1-201ENST00000413731 METTL3Q86U44 580 aaKnown RBP10.17□□□□□ -0.78
UPF3AP1-201ENST00000413731 ITPRIPQ8IWB1 547 aa10.17□□□□□ -0.78
UPF3AP1-201ENST00000413731 ZGPATQ8N5A5 531 aaKnown RBP10.17□□□□□ -0.78
UPF3AP1-201ENST00000413731 ZNF384Q8TF68 577 aa10.17□□□□□ -0.78
UPF3AP1-201ENST00000413731 MEIS3Q99687 375 aa10.17□□□□□ -0.78
UPF3AP1-201ENST00000413731 PNMA3Q9UL41 463 aa10.17□□□□□ -0.78
UPF3AP1-201ENST00000413731 HDAC5Q9UQL6 1122 aa10.17□□□□□ -0.78
UPF3AP1-201ENST00000413731 MYH1P12882 1939 aa10.17□□□□□ -0.78
UPF3AP1-201ENST00000413731 GNAI3P08754 354 aa10.16□□□□□ -0.78
UPF3AP1-201ENST00000413731 SYN1P17600 705 aa10.16□□□□□ -0.78
UPF3AP1-201ENST00000413731 IL15P40933 162 aaPredicted RBP10.16□□□□□ -0.78
UPF3AP1-201ENST00000413731 HMGCS2P54868 508 aa10.16□□□□□ -0.78
UPF3AP1-201ENST00000413731 MECOMQ03112 1051 aa10.16□□□□□ -0.78
UPF3AP1-201ENST00000413731 RRP1BQ14684 758 aaKnown RBP10.16□□□□□ -0.78
UPF3AP1-201ENST00000413731 Q7L0L9 218 aa10.16□□□□□ -0.78
UPF3AP1-201ENST00000413731 TMEM57Q8N5G2 664 aa10.16□□□□□ -0.78
UPF3AP1-201ENST00000413731 TRIB2Q92519 343 aa10.16□□□□□ -0.78
UPF3AP1-201ENST00000413731 GDF15Q99988 308 aa10.16□□□□□ -0.78
UPF3AP1-201ENST00000413731 COG6Q9Y2V7 657 aa10.16□□□□□ -0.78
UPF3AP1-201ENST00000413731 PCDHGA10Q9Y5H3 936 aa10.16□□□□□ -0.78
UPF3AP1-201ENST00000413731 LTBP2Q14767 1821 aa10.16□□□□□ -0.78
UPF3AP1-201ENST00000413731 GPR75-ASB3A0A0A6YYF3 556 aa10.15□□□□□ -0.78
UPF3AP1-201ENST00000413731 SPP2Q13103 211 aa10.15□□□□□ -0.78
UPF3AP1-201ENST00000413731 PI16Q6UXB8 463 aa10.15□□□□□ -0.78
UPF3AP1-201ENST00000413731 ZNF280CQ8ND82 737 aa10.15□□□□□ -0.78
UPF3AP1-201ENST00000413731 FAM163AQ96GL9 167 aaPredicted RBP10.15□□□□□ -0.78
UPF3AP1-201ENST00000413731 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.15□□□□□ -0.78
UPF3AP1-201ENST00000413731 OSBPL5Q9H0X9 879 aaPredicted RBP10.15□□□□□ -0.78
UPF3AP1-201ENST00000413731 ASCC2Q9H1I8 757 aaPredicted RBP10.15□□□□□ -0.78
UPF3AP1-201ENST00000413731 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.15□□□□□ -0.78
UPF3AP1-201ENST00000413731 COPRSQ9NQ92 184 aa10.15□□□□□ -0.78
UPF3AP1-201ENST00000413731 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.15□□□□□ -0.78
UPF3AP1-201ENST00000413731 PFASO15067 1338 aa10.14□□□□□ -0.79
UPF3AP1-201ENST00000413731 A0A1B0GUL7 405 aa10.14□□□□□ -0.79
UPF3AP1-201ENST00000413731 PEX10O60683 326 aa10.14□□□□□ -0.79
UPF3AP1-201ENST00000413731 BMP8BP34820 402 aa10.14□□□□□ -0.79
UPF3AP1-201ENST00000413731 RFC5P40937 340 aa10.14□□□□□ -0.79
UPF3AP1-201ENST00000413731 MAGEA10P43363 369 aaPredicted RBP10.14□□□□□ -0.79
UPF3AP1-201ENST00000413731 GCLCP48506 637 aaPredicted RBP10.14□□□□□ -0.79
UPF3AP1-201ENST00000413731 TIMM10P62072 90 aa10.14□□□□□ -0.79
UPF3AP1-201ENST00000413731 PADI6Q6TGC4 694 aa10.14□□□□□ -0.79
UPF3AP1-201ENST00000413731 SLF2Q8IX21 1173 aa10.14□□□□□ -0.79
UPF3AP1-201ENST00000413731 ANKLE1Q8NAG6 615 aa10.14□□□□□ -0.79
UPF3AP1-201ENST00000413731 XAGE2Q96GT9 111 aa10.14□□□□□ -0.79
UPF3AP1-201ENST00000413731 C11orf49Q9H6J7 331 aa10.14□□□□□ -0.79
UPF3AP1-201ENST00000413731 GJD2Q9UKL4 321 aa10.14□□□□□ -0.79
UPF3AP1-201ENST00000413731 RPTORQ8N122 1335 aa10.13□□□□□ -0.79
UPF3AP1-201ENST00000413731 GNAI2P04899 355 aa10.13□□□□□ -0.79
UPF3AP1-201ENST00000413731 RLBP1P12271 317 aa10.13□□□□□ -0.79
UPF3AP1-201ENST00000413731 CAPN2P17655 700 aa10.13□□□□□ -0.79
UPF3AP1-201ENST00000413731 TFCP2Q12800 502 aa10.13□□□□□ -0.79
UPF3AP1-201ENST00000413731 MTMR2Q13614 643 aa10.13□□□□□ -0.79
UPF3AP1-201ENST00000413731 SHROOM1Q2M3G4 852 aaPredicted RBP10.13□□□□□ -0.79
UPF3AP1-201ENST00000413731 SPTY2D1Q68D10 685 aaPredicted RBP10.13□□□□□ -0.79
UPF3AP1-201ENST00000413731 TBC1D9Q6ZT07 1266 aa10.13□□□□□ -0.79
UPF3AP1-201ENST00000413731 KCTD17Q8N5Z5 321 aa10.13□□□□□ -0.79
UPF3AP1-201ENST00000413731 DEFB123Q8N688 67 aa10.13□□□□□ -0.79
UPF3AP1-201ENST00000413731 BANK1Q8NDB2 785 aa10.13□□□□□ -0.79
UPF3AP1-201ENST00000413731 PANK1Q8TE04 598 aa10.13□□□□□ -0.79
UPF3AP1-201ENST00000413731 NSUN4Q96CB9 384 aaKnown RBP10.13□□□□□ -0.79
UPF3AP1-201ENST00000413731 TRAIPQ9BWF2 469 aa10.13□□□□□ -0.79
UPF3AP1-201ENST00000413731 TBC1D2Q9BYX2 928 aa10.13□□□□□ -0.79
UPF3AP1-201ENST00000413731 NBPF3Q9H094 633 aa10.13□□□□□ -0.79
UPF3AP1-201ENST00000413731 HMX1Q9NP08 348 aaPredicted RBP10.13□□□□□ -0.79
UPF3AP1-201ENST00000413731 SNRKQ9NRH2 765 aa10.13□□□□□ -0.79
UPF3AP1-201ENST00000413731 RLFQ13129 1914 aa10.13□□□□□ -0.79
UPF3AP1-201ENST00000413731 NAV1Q8NEY1 1877 aa10.13□□□□□ -0.79
UPF3AP1-201ENST00000413731 USP17L5A8MUK1 530 aa10.12□□□□□ -0.79
UPF3AP1-201ENST00000413731 SRGAP3O43295 1099 aa10.12□□□□□ -0.79
UPF3AP1-201ENST00000413731 CYP2B6P20813 491 aa10.12□□□□□ -0.79
UPF3AP1-201ENST00000413731 CAP2P40123 477 aa10.12□□□□□ -0.79
UPF3AP1-201ENST00000413731 PABPC4Q13310 644 aaKnown RBP eCLIP10.12□□□□□ -0.79
UPF3AP1-201ENST00000413731 MVPQ14764 893 aaKnown RBP10.12□□□□□ -0.79
UPF3AP1-201ENST00000413731 MAP3K21Q5TCX8 1036 aa10.12□□□□□ -0.79
UPF3AP1-201ENST00000413731 TDHQ8IZJ6 230 aa10.12□□□□□ -0.79
UPF3AP1-201ENST00000413731 DNAJC18Q9H819 358 aa10.12□□□□□ -0.79
UPF3AP1-201ENST00000413731 TXNRD2Q9NNW7 524 aa10.12□□□□□ -0.79
UPF3AP1-201ENST00000413731 HMG20BQ9P0W2 317 aa10.12□□□□□ -0.79
UPF3AP1-201ENST00000413731 MORF4L1Q9UBU8 362 aa10.12□□□□□ -0.79
UPF3AP1-201ENST00000413731 OGDHLQ9ULD0 1010 aa10.12□□□□□ -0.79
UPF3AP1-201ENST00000413731 IRX3P78415 501 aaPredicted RBP10.11□□□□□ -0.79
UPF3AP1-201ENST00000413731 JAG1P78504 1218 aa10.11□□□□□ -0.79
UPF3AP1-201ENST00000413731 LRIT3Q3SXY7 679 aa10.11□□□□□ -0.79
UPF3AP1-201ENST00000413731 GPR153Q6NV75 609 aa10.11□□□□□ -0.79
UPF3AP1-201ENST00000413731 TEX11Q8IYF3 940 aa10.11□□□□□ -0.79
UPF3AP1-201ENST00000413731 SPATA5Q8NB90 893 aa10.11□□□□□ -0.79
UPF3AP1-201ENST00000413731 SH3RF3Q8TEJ3 882 aaPredicted RBP10.11□□□□□ -0.79
UPF3AP1-201ENST00000413731 SOCS4Q8WXH5 440 aa10.11□□□□□ -0.79
UPF3AP1-201ENST00000413731 AS3MTQ9HBK9 375 aa10.11□□□□□ -0.79
UPF3AP1-201ENST00000413731 PLSCR2Q9NRY7 297 aa10.11□□□□□ -0.79
UPF3AP1-201ENST00000413731 RAI14Q9P0K7 980 aa10.11□□□□□ -0.79
UPF3AP1-201ENST00000413731 MYH8P13535 1937 aa10.11□□□□□ -0.79
UPF3AP1-201ENST00000413731 A0A0C4DFX4 3053 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms