RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 ERO1AQ96HE7 468 aa12.04□□□□□ -0.48
TMEM248-202ENST00000413593 CCDC17Q96LX7 622 aa12.04□□□□□ -0.48
TMEM248-202ENST00000413593 NAPBQ9H115 298 aa12.04□□□□□ -0.48
TMEM248-202ENST00000413593 TMOD4Q9NZQ9 345 aa12.04□□□□□ -0.48
TMEM248-202ENST00000413593 PHIPQ8WWQ0 1821 aa12.03□□□□□ -0.48
TMEM248-202ENST00000413593 CAP1Q01518 475 aa12.03□□□□□ -0.48
TMEM248-202ENST00000413593 USP17L2Q6R6M4 530 aa12.03□□□□□ -0.48
TMEM248-202ENST00000413593 CENPQQ7L2Z9 268 aaPredicted RBP12.03□□□□□ -0.48
TMEM248-202ENST00000413593 ZNF589Q86UQ0 364 aaPredicted RBP12.03□□□□□ -0.48
TMEM248-202ENST00000413593 CD99L2Q8TCZ2 262 aa12.03□□□□□ -0.48
TMEM248-202ENST00000413593 ACER1Q8TDN7 264 aa12.03□□□□□ -0.48
TMEM248-202ENST00000413593 KIAA1683Q9H0B3 1180 aa12.03□□□□□ -0.48
TMEM248-202ENST00000413593 EMILIN3Q9NT22 766 aa12.03□□□□□ -0.48
TMEM248-202ENST00000413593 CPA4Q9UI42 421 aa12.03□□□□□ -0.48
TMEM248-202ENST00000413593 CASP8AP2Q9UKL3 1982 aa12.03□□□□□ -0.48
TMEM248-202ENST00000413593 A0A1W2PRG0 241 aa12.02□□□□□ -0.49
TMEM248-202ENST00000413593 BCRP11274 1271 aa12.02□□□□□ -0.49
TMEM248-202ENST00000413593 RASA1P20936 1047 aa12.02□□□□□ -0.49
TMEM248-202ENST00000413593 USP14P54578 494 aa12.02□□□□□ -0.49
TMEM248-202ENST00000413593 PPARAQ07869 468 aa12.02□□□□□ -0.49
TMEM248-202ENST00000413593 PABPC4Q13310 644 aaKnown RBP eCLIP12.02□□□□□ -0.49
TMEM248-202ENST00000413593 CLEC10AQ8IUN9 316 aa12.02□□□□□ -0.49
TMEM248-202ENST00000413593 STK11IPQ8N1F8 1099 aa12.02□□□□□ -0.49
TMEM248-202ENST00000413593 SMCR8Q8TEV9 937 aaPredicted RBP12.02□□□□□ -0.49
TMEM248-202ENST00000413593 ABHD8Q96I13 439 aa12.02□□□□□ -0.49
TMEM248-202ENST00000413593 C12orf42Q96LP6 360 aa12.02□□□□□ -0.49
TMEM248-202ENST00000413593 FEZ1Q99689 392 aa12.02□□□□□ -0.49
TMEM248-202ENST00000413593 DIAPH3Q9NSV4 1193 aa12.02□□□□□ -0.49
TMEM248-202ENST00000413593 PNMA3Q9UL41 463 aa12.02□□□□□ -0.49
TMEM248-202ENST00000413593 CCDC171Q6TFL3 1326 aa12.02□□□□□ -0.49
TMEM248-202ENST00000413593 HIP1O00291 1037 aa12.01□□□□□ -0.49
TMEM248-202ENST00000413593 PRDM1O75626 825 aa12.01□□□□□ -0.49
TMEM248-202ENST00000413593 OSBPP22059 807 aa12.01□□□□□ -0.49
TMEM248-202ENST00000413593 HOXA7P31268 230 aaPredicted RBP12.01□□□□□ -0.49
TMEM248-202ENST00000413593 LACTBP83111 547 aaPredicted RBP12.01□□□□□ -0.49
TMEM248-202ENST00000413593 ICA1Q05084 483 aa12.01□□□□□ -0.49
TMEM248-202ENST00000413593 ALX1Q15699 326 aa12.01□□□□□ -0.49
TMEM248-202ENST00000413593 ZYXQ15942 572 aaKnown RBP12.01□□□□□ -0.49
TMEM248-202ENST00000413593 PKN2Q16513 984 aaKnown RBP12.01□□□□□ -0.49
TMEM248-202ENST00000413593 IFFO2Q5TF58 517 aa12.01□□□□□ -0.49
TMEM248-202ENST00000413593 CWC27Q6UX04 472 aaKnown RBP12.01□□□□□ -0.49
TMEM248-202ENST00000413593 OTOP1Q7RTM1 612 aa12.01□□□□□ -0.49
TMEM248-202ENST00000413593 SIAH1Q8IUQ4 282 aa12.01□□□□□ -0.49
TMEM248-202ENST00000413593 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.01□□□□□ -0.49
TMEM248-202ENST00000413593 ARHGAP39Q9C0H5 1083 aa12.01□□□□□ -0.49
TMEM248-202ENST00000413593 ASCC2Q9H1I8 757 aaPredicted RBP12.01□□□□□ -0.49
TMEM248-202ENST00000413593 EFCC1Q9HA90 598 aa12.01□□□□□ -0.49
TMEM248-202ENST00000413593 MKNK2Q9HBH9 465 aa12.01□□□□□ -0.49
TMEM248-202ENST00000413593 TRIM17Q9Y577 477 aa12.01□□□□□ -0.49
TMEM248-202ENST00000413593 ATAD5Q96QE3 1844 aa12□□□□□ -0.49
TMEM248-202ENST00000413593 NEFLP07196 543 aa12□□□□□ -0.49
TMEM248-202ENST00000413593 CENPBP07199 599 aaPredicted RBP12□□□□□ -0.49
TMEM248-202ENST00000413593 HSPD1P10809 573 aaKnown RBP12□□□□□ -0.49
TMEM248-202ENST00000413593 MFAP1P55081 439 aaKnown RBP12□□□□□ -0.49
TMEM248-202ENST00000413593 IRX3P78415 501 aaPredicted RBP12□□□□□ -0.49
TMEM248-202ENST00000413593 KIF22Q14807 665 aa12□□□□□ -0.49
TMEM248-202ENST00000413593 FBXO46Q6PJ61 603 aaPredicted RBP12□□□□□ -0.49
TMEM248-202ENST00000413593 KANSL2Q9H9L4 492 aa12□□□□□ -0.49
TMEM248-202ENST00000413593 ZNF287Q9HBT7 754 aa12□□□□□ -0.49
TMEM248-202ENST00000413593 LOC285556D6RIA3 1793 aa12□□□□□ -0.49
TMEM248-202ENST00000413593 BAZ2AQ9UIF9 1905 aaKnown RBP11.99□□□□□ -0.49
TMEM248-202ENST00000413593 FGAP02671 866 aa11.99□□□□□ -0.49
TMEM248-202ENST00000413593 SLC3A2P08195 630 aaKnown RBP11.99□□□□□ -0.49
TMEM248-202ENST00000413593 VCAM1P19320 739 aa11.99□□□□□ -0.49
TMEM248-202ENST00000413593 CTGFP29279 349 aa11.99□□□□□ -0.49
TMEM248-202ENST00000413593 GCLCP48506 637 aaPredicted RBP11.99□□□□□ -0.49
TMEM248-202ENST00000413593 PDE4BQ07343 736 aa11.99□□□□□ -0.49
TMEM248-202ENST00000413593 ARHGEF6Q15052 776 aa11.99□□□□□ -0.49
TMEM248-202ENST00000413593 CCDC136Q96JN2 1154 aa11.99□□□□□ -0.49
TMEM248-202ENST00000413593 P2RX7Q99572 595 aaKnown RBP11.99□□□□□ -0.49
TMEM248-202ENST00000413593 ARHGEF10LQ9HCE6 1279 aa11.99□□□□□ -0.49
TMEM248-202ENST00000413593 ANAPC4Q9UJX5 808 aa11.99□□□□□ -0.49
TMEM248-202ENST00000413593 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.99□□□□□ -0.49
TMEM248-202ENST00000413593 TMX2Q9Y320 296 aa11.99□□□□□ -0.49
TMEM248-202ENST00000413593 ZMYM6O95789 1325 aa11.99□□□□□ -0.49
TMEM248-202ENST00000413593 PTPRFP10586 1907 aa11.99□□□□□ -0.49
TMEM248-202ENST00000413593 USP17L15C9J2P7 530 aa11.98□□□□□ -0.49
TMEM248-202ENST00000413593 USP17L13C9JLJ4 530 aa11.98□□□□□ -0.49
TMEM248-202ENST00000413593 USP17L11C9JVI0 530 aa11.98□□□□□ -0.49
TMEM248-202ENST00000413593 USP17L18D6R9N7 530 aa11.98□□□□□ -0.49
TMEM248-202ENST00000413593 USP17L22D6RA61 530 aa11.98□□□□□ -0.49
TMEM248-202ENST00000413593 USP17L17D6RBQ6 530 aa11.98□□□□□ -0.49
TMEM248-202ENST00000413593 USP17L19D6RCP7 530 aa11.98□□□□□ -0.49
TMEM248-202ENST00000413593 USP17L20D6RJB6 530 aa11.98□□□□□ -0.49
TMEM248-202ENST00000413593 EEF2P13639 858 aaKnown RBP11.98□□□□□ -0.49
TMEM248-202ENST00000413593 PSMC4P43686 418 aa11.98□□□□□ -0.49
TMEM248-202ENST00000413593 HERVK_113P62684 666 aa11.98□□□□□ -0.49
TMEM248-202ENST00000413593 CTDSPL2Q05D32 466 aa11.98□□□□□ -0.49
TMEM248-202ENST00000413593 USP17L24Q0WX57 530 aa11.98□□□□□ -0.49
TMEM248-202ENST00000413593 FAM110CQ1W6H9 321 aa11.98□□□□□ -0.49
TMEM248-202ENST00000413593 ZNF444Q8N0Y2 327 aaPredicted RBP11.98□□□□□ -0.49
TMEM248-202ENST00000413593 ANKRD13CQ8N6S4 541 aa11.98□□□□□ -0.49
TMEM248-202ENST00000413593 TRIM47Q96LD4 638 aa11.98□□□□□ -0.49
TMEM248-202ENST00000413593 IL25Q9H293 177 aa11.98□□□□□ -0.49
TMEM248-202ENST00000413593 SH2D4AQ9H788 454 aa11.98□□□□□ -0.49
TMEM248-202ENST00000413593 HPS5Q9UPZ3 1129 aa11.98□□□□□ -0.49
TMEM248-202ENST00000413593 PTPN22Q9Y2R2 807 aa11.98□□□□□ -0.49
TMEM248-202ENST00000413593 PLIN4Q96Q06 1357 aa11.97□□□□□ -0.49
TMEM248-202ENST00000413593 RAD50Q92878 1312 aa11.97□□□□□ -0.49
TMEM248-202ENST00000413593 IGKV6D-41A0A0C4DH26 115 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms