RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 ARMCX5Q6P1M9 558 aa13.14□□□□□ -0.31
TRAFD1-202ENST00000412615 NYAP1Q6ZVC0 841 aa13.14□□□□□ -0.31
TRAFD1-202ENST00000412615 CCDC24Q8N4L8 307 aa13.14□□□□□ -0.31
TRAFD1-202ENST00000412615 CCDC112Q8NEF3 446 aa13.14□□□□□ -0.31
TRAFD1-202ENST00000412615 ARHGEF1Q92888 912 aaKnown RBP13.14□□□□□ -0.31
TRAFD1-202ENST00000412615 SHISA4Q96DD7 197 aa13.14□□□□□ -0.31
TRAFD1-202ENST00000412615 CSRNP2Q9H175 543 aa13.14□□□□□ -0.31
TRAFD1-202ENST00000412615 MAN1B1Q9UKM7 699 aa13.14□□□□□ -0.31
TRAFD1-202ENST00000412615 USP27XA6NNY8 438 aa13.14□□□□□ -0.31
TRAFD1-202ENST00000412615 KCNJ6P48051 423 aa13.14□□□□□ -0.31
TRAFD1-202ENST00000412615 DZIP1Q86YF9 867 aaKnown RBP13.14□□□□□ -0.31
TRAFD1-202ENST00000412615 hCG_1642624A0A1W2PR95 340 aa13.13□□□□□ -0.31
TRAFD1-202ENST00000412615 KIF2AO00139 706 aaPredicted RBP13.13□□□□□ -0.31
TRAFD1-202ENST00000412615 BMP6P22004 513 aa13.13□□□□□ -0.31
TRAFD1-202ENST00000412615 CFAP100Q494V2 611 aa13.13□□□□□ -0.31
TRAFD1-202ENST00000412615 ZNF710Q8N1W2 664 aa13.13□□□□□ -0.31
TRAFD1-202ENST00000412615 FNBP4Q8N3X1 1017 aaPredicted RBP13.13□□□□□ -0.31
TRAFD1-202ENST00000412615 FERMT2Q96AC1 680 aa13.13□□□□□ -0.31
TRAFD1-202ENST00000412615 FANCLQ9NW38 375 aa13.13□□□□□ -0.31
TRAFD1-202ENST00000412615 TRMT1Q9NXH9 659 aaKnown RBP13.13□□□□□ -0.31
TRAFD1-202ENST00000412615 TSPY2A6NKD2 308 aa13.13□□□□□ -0.31
TRAFD1-202ENST00000412615 FAM47AQ5JRC9 791 aa13.13□□□□□ -0.31
TRAFD1-202ENST00000412615 CASZ1Q86V15 1759 aa13.13□□□□□ -0.31
TRAFD1-202ENST00000412615 PDILTQ8N807 584 aa13.13□□□□□ -0.31
TRAFD1-202ENST00000412615 BAZ2AQ9UIF9 1905 aaKnown RBP13.13□□□□□ -0.31
TRAFD1-202ENST00000412615 MYH2Q9UKX2 1941 aa13.13□□□□□ -0.31
TRAFD1-202ENST00000412615 LEMD3Q9Y2U8 911 aa13.13□□□□□ -0.31
TRAFD1-202ENST00000412615 COL24A1Q17RW2 1714 aa13.12□□□□□ -0.31
TRAFD1-202ENST00000412615 CNTNAP5Q8WYK1 1306 aa13.12□□□□□ -0.31
TRAFD1-202ENST00000412615 PSDA5PKW4 1024 aaPredicted RBP13.12□□□□□ -0.31
TRAFD1-202ENST00000412615 ACTN4O43707 911 aaKnown RBP13.12□□□□□ -0.31
TRAFD1-202ENST00000412615 KIF5BP33176 963 aa13.12□□□□□ -0.31
TRAFD1-202ENST00000412615 RFC4P35249 363 aa13.12□□□□□ -0.31
TRAFD1-202ENST00000412615 MORC3Q14149 939 aa13.12□□□□□ -0.31
TRAFD1-202ENST00000412615 TXNRD3Q86VQ6 643 aa13.12□□□□□ -0.31
TRAFD1-202ENST00000412615 SRBD1Q8N5C6 995 aaKnown RBP13.12□□□□□ -0.31
TRAFD1-202ENST00000412615 WDR66Q8TBY9 1149 aa13.12□□□□□ -0.31
TRAFD1-202ENST00000412615 ZNF592Q92610 1267 aa13.12□□□□□ -0.31
TRAFD1-202ENST00000412615 MCM9Q9NXL9 1143 aa13.12□□□□□ -0.31
TRAFD1-202ENST00000412615 IRS2Q9Y4H2 1338 aa13.12□□□□□ -0.31
TRAFD1-202ENST00000412615 FAM205CA6NFA0 338 aa13.12□□□□□ -0.31
TRAFD1-202ENST00000412615 PRR29P0C7W0 189 aa13.12□□□□□ -0.31
TRAFD1-202ENST00000412615 SYCP1Q15431 976 aa13.12□□□□□ -0.31
TRAFD1-202ENST00000412615 EARS2Q5JPH6 523 aaKnown RBP13.12□□□□□ -0.31
TRAFD1-202ENST00000412615 ENOX1Q8TC92 643 aaKnown RBP13.12□□□□□ -0.31
TRAFD1-202ENST00000412615 ANKIB1Q9P2G1 1089 aa13.12□□□□□ -0.31
TRAFD1-202ENST00000412615 NMT2O60551 498 aa13.11□□□□□ -0.31
TRAFD1-202ENST00000412615 CYP2D6P10635 497 aa13.11□□□□□ -0.31
TRAFD1-202ENST00000412615 TRAPPC3LQ5T215 181 aa13.11□□□□□ -0.31
TRAFD1-202ENST00000412615 USP49Q70CQ1 688 aa13.11□□□□□ -0.31
TRAFD1-202ENST00000412615 SPATA20Q8TB22 786 aa13.11□□□□□ -0.31
TRAFD1-202ENST00000412615 DPF2Q92785 391 aa13.11□□□□□ -0.31
TRAFD1-202ENST00000412615 TNFRSF25Q93038 417 aa13.11□□□□□ -0.31
TRAFD1-202ENST00000412615 LDHBP07195 334 aaKnown RBP13.11□□□□□ -0.31
TRAFD1-202ENST00000412615 SCG2P13521 617 aa13.11□□□□□ -0.31
TRAFD1-202ENST00000412615 NLRP5P59047 1200 aa13.11□□□□□ -0.31
TRAFD1-202ENST00000412615 EVX2Q03828 476 aa13.11□□□□□ -0.31
TRAFD1-202ENST00000412615 CT47A1Q5JQC4 288 aaPredicted RBP13.11□□□□□ -0.31
TRAFD1-202ENST00000412615 TTC38Q5R3I4 469 aa13.11□□□□□ -0.31
TRAFD1-202ENST00000412615 E4F1Q66K89 784 aaPredicted RBP13.11□□□□□ -0.31
TRAFD1-202ENST00000412615 VSTM4Q8IW00 320 aa13.11□□□□□ -0.31
TRAFD1-202ENST00000412615 MYH6P13533 1939 aa13.1□□□□□ -0.31
TRAFD1-202ENST00000412615 TUBB4AP04350 444 aa13.1□□□□□ -0.31
TRAFD1-202ENST00000412615 SLFN14P0C7P3 912 aa13.1□□□□□ -0.31
TRAFD1-202ENST00000412615 TOP1P11387 765 aaKnown RBP13.1□□□□□ -0.31
TRAFD1-202ENST00000412615 USP5P45974 858 aa13.1□□□□□ -0.31
TRAFD1-202ENST00000412615 TRAPPC10P48553 1259 aa13.1□□□□□ -0.31
TRAFD1-202ENST00000412615 GSTO1P78417 241 aa13.1□□□□□ -0.31
TRAFD1-202ENST00000412615 GRAPQ13588 217 aa13.1□□□□□ -0.31
TRAFD1-202ENST00000412615 NPY5RQ15761 445 aa13.1□□□□□ -0.31
TRAFD1-202ENST00000412615 DGKHQ86XP1 1220 aa13.1□□□□□ -0.31
TRAFD1-202ENST00000412615 KIF18AQ8NI77 898 aa13.1□□□□□ -0.31
TRAFD1-202ENST00000412615 GRAPLQ8TC17 118 aaPredicted RBP13.1□□□□□ -0.31
TRAFD1-202ENST00000412615 DHX58Q96C10 678 aa13.1□□□□□ -0.31
TRAFD1-202ENST00000412615 USP21Q9UK80 565 aa13.1□□□□□ -0.31
TRAFD1-202ENST00000412615 JAG2Q9Y219 1238 aa13.1□□□□□ -0.31
TRAFD1-202ENST00000412615 DLEC1Q9Y238 1755 aa13.1□□□□□ -0.31
TRAFD1-202ENST00000412615 CCP110O43303 1012 aa13.1□□□□□ -0.31
TRAFD1-202ENST00000412615 BAG3O95817 575 aa13.1□□□□□ -0.31
TRAFD1-202ENST00000412615 USP17L8P0C7I0 530 aa13.1□□□□□ -0.31
TRAFD1-202ENST00000412615 CDK11BP21127 795 aaKnown RBP13.1□□□□□ -0.31
TRAFD1-202ENST00000412615 PFKFB3Q16875 520 aaPredicted RBP13.1□□□□□ -0.31
TRAFD1-202ENST00000412615 CCDC178Q5BJE1 867 aa13.1□□□□□ -0.31
TRAFD1-202ENST00000412615 C12orf60Q5U649 245 aa13.1□□□□□ -0.31
TRAFD1-202ENST00000412615 AMOTL1Q8IY63 956 aa13.1□□□□□ -0.31
TRAFD1-202ENST00000412615 ANKRD7Q92527 254 aa13.1□□□□□ -0.31
TRAFD1-202ENST00000412615 KAT14Q9H8E8 782 aa13.1□□□□□ -0.31
TRAFD1-202ENST00000412615 NFE2L3Q9Y4A8 694 aa13.1□□□□□ -0.31
TRAFD1-202ENST00000412615 MYH13Q9UKX3 1938 aa13.1□□□□□ -0.31
TRAFD1-202ENST00000412615 ERCC5P28715 1186 aaPredicted RBP13.09□□□□□ -0.31
TRAFD1-202ENST00000412615 ZNF174Q15697 407 aa13.09□□□□□ -0.31
TRAFD1-202ENST00000412615 RCSD1Q6JBY9 416 aa13.09□□□□□ -0.31
TRAFD1-202ENST00000412615 AMIGO3Q86WK7 504 aa13.09□□□□□ -0.31
TRAFD1-202ENST00000412615 GRAMD1CQ8IYS0 662 aa13.09□□□□□ -0.31
TRAFD1-202ENST00000412615 SYMPKQ92797 1274 aaKnown RBP13.09□□□□□ -0.31
TRAFD1-202ENST00000412615 EPSTI1Q96J88 318 aa13.09□□□□□ -0.31
TRAFD1-202ENST00000412615 MKRN1Q9UHC7 482 aaKnown RBP13.09□□□□□ -0.31
TRAFD1-202ENST00000412615 BTAF1O14981 1849 aa13.09□□□□□ -0.31
TRAFD1-202ENST00000412615 MAST2Q6P0Q8 1798 aa13.09□□□□□ -0.31
TRAFD1-202ENST00000412615 LDHCP07864 332 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms