RNA–Protein interactions for RNA: ENST00000412328.5

HSPG2-204, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-204ENST00000412328 SEPT2Q15019 361 aa20.88■□□□□ 0.93
HSPG2-204ENST00000412328 B4GALNT3Q6L9W6 998 aa20.88■□□□□ 0.93
HSPG2-204ENST00000412328 KIAA1683Q9H0B3 1180 aa20.88■□□□□ 0.93
HSPG2-204ENST00000412328 ASCC2Q9H1I8 757 aaPredicted RBP20.88■□□□□ 0.93
HSPG2-204ENST00000412328 PNMA3Q9UL41 463 aa20.88■□□□□ 0.93
HSPG2-204ENST00000412328 PTCH2Q9Y6C5 1203 aa20.88■□□□□ 0.93
HSPG2-204ENST00000412328 A0A1W2PRG0 241 aa20.87■□□□□ 0.93
HSPG2-204ENST00000412328 CDK8P49336 464 aa20.87■□□□□ 0.93
HSPG2-204ENST00000412328 RAB3GAP1Q15042 981 aa20.87■□□□□ 0.93
HSPG2-204ENST00000412328 FAM110CQ1W6H9 321 aa20.87■□□□□ 0.93
HSPG2-204ENST00000412328 CLEC10AQ8IUN9 316 aa20.87■□□□□ 0.93
HSPG2-204ENST00000412328 SIAH1Q8IUQ4 282 aa20.87■□□□□ 0.93
HSPG2-204ENST00000412328 ARMC5Q96C12 935 aa20.87■□□□□ 0.93
HSPG2-204ENST00000412328 EVI5LQ96CN4 794 aa20.87■□□□□ 0.93
HSPG2-204ENST00000412328 FRMPD3Q5JV73 1810 aa20.86■□□□□ 0.93
HSPG2-204ENST00000412328 GNRH1P01148 92 aa20.86■□□□□ 0.93
HSPG2-204ENST00000412328 OSBPP22059 807 aa20.86■□□□□ 0.93
HSPG2-204ENST00000412328 MKI67P46013 3256 aaKnown RBP20.86■□□□□ 0.93
HSPG2-204ENST00000412328 GNAT2P19087 354 aa20.85■□□□□ 0.93
HSPG2-204ENST00000412328 PDE4AP27815 886 aa20.85■□□□□ 0.93
HSPG2-204ENST00000412328 LRRFIP1Q32MZ4 808 aaKnown RBP20.85■□□□□ 0.93
HSPG2-204ENST00000412328 USP17L2Q6R6M4 530 aa20.85■□□□□ 0.93
HSPG2-204ENST00000412328 TMEM179Q6ZVK1 233 aa20.85■□□□□ 0.93
HSPG2-204ENST00000412328 SMCR8Q8TEV9 937 aaPredicted RBP20.85■□□□□ 0.93
HSPG2-204ENST00000412328 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.85■□□□□ 0.93
HSPG2-204ENST00000412328 PLIN4Q96Q06 1357 aa20.85■□□□□ 0.93
HSPG2-204ENST00000412328 A0A0D9SFI3 127 aa20.84■□□□□ 0.93
HSPG2-204ENST00000412328 VCAM1P19320 739 aa20.84■□□□□ 0.93
HSPG2-204ENST00000412328 PSMC4P43686 418 aa20.84■□□□□ 0.93
HSPG2-204ENST00000412328 PABPC4Q13310 644 aaKnown RBP eCLIP20.84■□□□□ 0.93
HSPG2-204ENST00000412328 CCDC129Q6ZRS4 1044 aa20.84■□□□□ 0.93
HSPG2-204ENST00000412328 TICAM2Q86XR7 235 aa20.84■□□□□ 0.93
HSPG2-204ENST00000412328 IFNL3Q8IZI9 196 aa20.84■□□□□ 0.93
HSPG2-204ENST00000412328 ANKRD13CQ8N6S4 541 aa20.84■□□□□ 0.93
HSPG2-204ENST00000412328 CABP5Q9NP86 173 aa20.84■□□□□ 0.93
HSPG2-204ENST00000412328 TMOD4Q9NZQ9 345 aa20.84■□□□□ 0.93
HSPG2-204ENST00000412328 MORF4L1Q9UBU8 362 aa20.84■□□□□ 0.93
HSPG2-204ENST00000412328 ZBTB47Q9UFB7 747 aaPredicted RBP20.84■□□□□ 0.93
HSPG2-204ENST00000412328 RASA1P20936 1047 aa20.83■□□□□ 0.93
HSPG2-204ENST00000412328 SOX10P56693 466 aa20.83■□□□□ 0.93
HSPG2-204ENST00000412328 HERVK_113P62684 666 aa20.83■□□□□ 0.93
HSPG2-204ENST00000412328 ZYXQ15942 572 aaKnown RBP20.83■□□□□ 0.93
HSPG2-204ENST00000412328 KIAA1755Q5JYT7 1200 aa20.83■□□□□ 0.93
HSPG2-204ENST00000412328 TXNRD2Q9NNW7 524 aa20.83■□□□□ 0.93
HSPG2-204ENST00000412328 SRRDQ9UH36 339 aa20.83■□□□□ 0.93
HSPG2-204ENST00000412328 PATL2C9JE40 543 aaKnown RBP20.82■□□□□ 0.92
HSPG2-204ENST00000412328 PEX10O60683 326 aa20.82■□□□□ 0.92
HSPG2-204ENST00000412328 GCLCP48506 637 aaPredicted RBP20.82■□□□□ 0.92
HSPG2-204ENST00000412328 PRMT2P55345 433 aa20.82■□□□□ 0.92
HSPG2-204ENST00000412328 KIF22Q14807 665 aa20.82■□□□□ 0.92
HSPG2-204ENST00000412328 VPS53Q5VIR6 699 aa20.82■□□□□ 0.92
HSPG2-204ENST00000412328 DDRGK1Q96HY6 314 aa20.82■□□□□ 0.92
HSPG2-204ENST00000412328 ZNF333Q96JL9 665 aa20.82■□□□□ 0.92
HSPG2-204ENST00000412328 CCDC17Q96LX7 622 aa20.82■□□□□ 0.92
HSPG2-204ENST00000412328 FAM227BQ96M60 508 aa20.82■□□□□ 0.92
HSPG2-204ENST00000412328 P2RX7Q99572 595 aaKnown RBP20.82■□□□□ 0.92
HSPG2-204ENST00000412328 ZNFX1Q9P2E3 1918 aaKnown RBP20.82■□□□□ 0.92
HSPG2-204ENST00000412328 ECM2O94769 699 aaPredicted RBP20.81■□□□□ 0.92
HSPG2-204ENST00000412328 USP14P54578 494 aa20.81■□□□□ 0.92
HSPG2-204ENST00000412328 PRKCZQ05513 592 aa20.81■□□□□ 0.92
HSPG2-204ENST00000412328 AMOTL1Q8IY63 956 aa20.81■□□□□ 0.92
HSPG2-204ENST00000412328 FEZ1Q99689 392 aa20.81■□□□□ 0.92
HSPG2-204ENST00000412328 GABRQQ9UN88 632 aa20.81■□□□□ 0.92
HSPG2-204ENST00000412328 PLXNA1Q9UIW2 1896 aa20.81■□□□□ 0.92
HSPG2-204ENST00000412328 MYPNQ86TC9 1320 aa20.8■□□□□ 0.92
HSPG2-204ENST00000412328 IGKV6D-41A0A0C4DH26 115 aa20.8■□□□□ 0.92
HSPG2-204ENST00000412328 MPHOSPH10O00566 681 aaKnown RBP20.8■□□□□ 0.92
HSPG2-204ENST00000412328 CNMDO75829 334 aa20.8■□□□□ 0.92
HSPG2-204ENST00000412328 TDO2P48775 406 aa20.8■□□□□ 0.92
HSPG2-204ENST00000412328 FCGRTP55899 365 aa20.8■□□□□ 0.92
HSPG2-204ENST00000412328 IRX3P78415 501 aaPredicted RBP20.8■□□□□ 0.92
HSPG2-204ENST00000412328 ICA1Q05084 483 aa20.8■□□□□ 0.92
HSPG2-204ENST00000412328 ARHGEF6Q15052 776 aa20.8■□□□□ 0.92
HSPG2-204ENST00000412328 LBX2Q6XYB7 198 aa20.8■□□□□ 0.92
HSPG2-204ENST00000412328 ZNF589Q86UQ0 364 aaPredicted RBP20.8■□□□□ 0.92
HSPG2-204ENST00000412328 HELLSQ9NRZ9 838 aa20.8■□□□□ 0.92
HSPG2-204ENST00000412328 NMIQ13287 307 aaPredicted RBP20.79■□□□□ 0.92
HSPG2-204ENST00000412328 CATSPERGQ6ZRH7 1159 aa20.79■□□□□ 0.92
HSPG2-204ENST00000412328 RBPJLQ9UBG7 517 aa20.79■□□□□ 0.92
HSPG2-204ENST00000412328 TMX2Q9Y320 296 aa20.79■□□□□ 0.92
HSPG2-204ENST00000412328 TACC3Q9Y6A5 838 aa20.79■□□□□ 0.92
HSPG2-204ENST00000412328 PDE4DIPQ5VU43 2346 aa20.79■□□□□ 0.92
HSPG2-204ENST00000412328 ZMYM6O95789 1325 aa20.78■□□□□ 0.92
HSPG2-204ENST00000412328 SPDYE16A6NNV3 312 aaPredicted RBP20.78■□□□□ 0.92
HSPG2-204ENST00000412328 GSPT1P15170 499 aaKnown RBP20.78■□□□□ 0.92
HSPG2-204ENST00000412328 RPAP3Q9H6T3 665 aaPredicted RBP20.78■□□□□ 0.92
HSPG2-204ENST00000412328 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.78■□□□□ 0.92
HSPG2-204ENST00000412328 MINDY4BA8MYZ0 360 aa20.77■□□□□ 0.92
HSPG2-204ENST00000412328 USP17L15C9J2P7 530 aa20.77■□□□□ 0.92
HSPG2-204ENST00000412328 USP17L13C9JLJ4 530 aa20.77■□□□□ 0.92
HSPG2-204ENST00000412328 USP17L11C9JVI0 530 aa20.77■□□□□ 0.92
HSPG2-204ENST00000412328 USP17L18D6R9N7 530 aa20.77■□□□□ 0.92
HSPG2-204ENST00000412328 USP17L22D6RA61 530 aa20.77■□□□□ 0.92
HSPG2-204ENST00000412328 USP17L17D6RBQ6 530 aa20.77■□□□□ 0.92
HSPG2-204ENST00000412328 USP17L19D6RCP7 530 aa20.77■□□□□ 0.92
HSPG2-204ENST00000412328 USP17L20D6RJB6 530 aa20.77■□□□□ 0.92
HSPG2-204ENST00000412328 FMNL1O95466 1100 aaPredicted RBP20.77■□□□□ 0.92
HSPG2-204ENST00000412328 PPARAQ07869 468 aa20.77■□□□□ 0.92
HSPG2-204ENST00000412328 USP17L24Q0WX57 530 aa20.77■□□□□ 0.92
HSPG2-204ENST00000412328 SH3TC2Q8TF17 1288 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms