RNA–Protein interactions for RNA: ENST00000412218.1

LINC01643-201, Transcript of long intergenic non-protein coding RNA 1643, humanhuman

TSL 5 BASIC

Gene LINC01643, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01643-201ENST00000412218 PUS7LQ9H0K6 701 aaKnown RBP12.22□□□□□ -0.45
LINC01643-201ENST00000412218 RWDD1Q9H446 243 aaPredicted RBP12.22□□□□□ -0.45
LINC01643-201ENST00000412218 TXNRD2Q9NNW7 524 aa12.22□□□□□ -0.45
LINC01643-201ENST00000412218 CABP5Q9NP86 173 aa12.22□□□□□ -0.45
LINC01643-201ENST00000412218 SWAP70Q9UH65 585 aa12.22□□□□□ -0.45
LINC01643-201ENST00000412218 MGAMO43451 1857 aa12.22□□□□□ -0.45
LINC01643-201ENST00000412218 TTC41PQ6P2S7 1318 aa12.21□□□□□ -0.45
LINC01643-201ENST00000412218 ADCY3O60266 1144 aa12.21□□□□□ -0.45
LINC01643-201ENST00000412218 CCL5P13501 91 aa12.21□□□□□ -0.45
LINC01643-201ENST00000412218 ELNP15502 786 aa12.21□□□□□ -0.45
LINC01643-201ENST00000412218 UBXN2AP68543 259 aa12.21□□□□□ -0.45
LINC01643-201ENST00000412218 SEPT2Q15019 361 aa12.21□□□□□ -0.45
LINC01643-201ENST00000412218 C12orf60Q5U649 245 aa12.21□□□□□ -0.45
LINC01643-201ENST00000412218 GTF3C2Q8WUA4 911 aaPredicted RBP12.21□□□□□ -0.45
LINC01643-201ENST00000412218 SHISA4Q96DD7 197 aa12.21□□□□□ -0.45
LINC01643-201ENST00000412218 DYNLL2Q96FJ2 89 aa12.21□□□□□ -0.45
LINC01643-201ENST00000412218 SLC4A4Q9Y6R1 1079 aa12.21□□□□□ -0.45
LINC01643-201ENST00000412218 CENPFP49454 3210 aa12.21□□□□□ -0.46
LINC01643-201ENST00000412218 CYP2D7A0A087X1C5 515 aa12.2□□□□□ -0.46
LINC01643-201ENST00000412218 SMIM22K7EJ46 135 aa12.2□□□□□ -0.46
LINC01643-201ENST00000412218 MPHOSPH10O00566 681 aaKnown RBP12.2□□□□□ -0.46
LINC01643-201ENST00000412218 PEX10O60683 326 aa12.2□□□□□ -0.46
LINC01643-201ENST00000412218 INHAP05111 366 aa12.2□□□□□ -0.46
LINC01643-201ENST00000412218 VCAM1P19320 739 aa12.2□□□□□ -0.46
LINC01643-201ENST00000412218 PDE4AP27815 886 aa12.2□□□□□ -0.46
LINC01643-201ENST00000412218 ANP32AP39687 249 aaKnown RBP12.2□□□□□ -0.46
LINC01643-201ENST00000412218 POTEEQ6S8J3 1075 aa12.2□□□□□ -0.46
LINC01643-201ENST00000412218 TMEM179Q6ZVK1 233 aa12.2□□□□□ -0.46
LINC01643-201ENST00000412218 GPRC5AQ8NFJ5 357 aa12.2□□□□□ -0.46
LINC01643-201ENST00000412218 PI4K2BQ8TCG2 481 aa12.2□□□□□ -0.46
LINC01643-201ENST00000412218 OTUD7AQ8TE49 926 aaPredicted RBP12.2□□□□□ -0.46
LINC01643-201ENST00000412218 RBPJLQ9UBG7 517 aa12.2□□□□□ -0.46
LINC01643-201ENST00000412218 BIN2Q9UBW5 565 aaPredicted RBP12.2□□□□□ -0.46
LINC01643-201ENST00000412218 BRCA2P51587 3418 aa12.2□□□□□ -0.46
LINC01643-201ENST00000412218 SALL3Q9BXA9 1300 aa12.19□□□□□ -0.46
LINC01643-201ENST00000412218 A0A1W2PRG0 241 aa12.19□□□□□ -0.46
LINC01643-201ENST00000412218 USP17L15C9J2P7 530 aa12.19□□□□□ -0.46
LINC01643-201ENST00000412218 USP17L13C9JLJ4 530 aa12.19□□□□□ -0.46
LINC01643-201ENST00000412218 USP17L12C9JPN9 530 aa12.19□□□□□ -0.46
LINC01643-201ENST00000412218 USP17L11C9JVI0 530 aa12.19□□□□□ -0.46
LINC01643-201ENST00000412218 USP17L21D6R901 530 aa12.19□□□□□ -0.46
LINC01643-201ENST00000412218 USP17L18D6R9N7 530 aa12.19□□□□□ -0.46
LINC01643-201ENST00000412218 USP17L22D6RA61 530 aa12.19□□□□□ -0.46
LINC01643-201ENST00000412218 USP17L17D6RBQ6 530 aa12.19□□□□□ -0.46
LINC01643-201ENST00000412218 USP17L19D6RCP7 530 aa12.19□□□□□ -0.46
LINC01643-201ENST00000412218 USP17L20D6RJB6 530 aa12.19□□□□□ -0.46
LINC01643-201ENST00000412218 RNF113AO15541 343 aaKnown RBP12.19□□□□□ -0.46
LINC01643-201ENST00000412218 GJB1P08034 283 aa12.19□□□□□ -0.46
LINC01643-201ENST00000412218 AKR1B1P15121 316 aa12.19□□□□□ -0.46
LINC01643-201ENST00000412218 GJA8P48165 433 aa12.19□□□□□ -0.46
LINC01643-201ENST00000412218 ERVK-9P63128 1117 aa12.19□□□□□ -0.46
LINC01643-201ENST00000412218 ERVK-24P63145 666 aa12.19□□□□□ -0.46
LINC01643-201ENST00000412218 USP17L24Q0WX57 530 aa12.19□□□□□ -0.46
LINC01643-201ENST00000412218 HDAC1Q13547 482 aaPredicted RBP12.19□□□□□ -0.46
LINC01643-201ENST00000412218 CTR9Q6PD62 1173 aa12.19□□□□□ -0.46
LINC01643-201ENST00000412218 CATSPERGQ6ZRH7 1159 aa12.19□□□□□ -0.46
LINC01643-201ENST00000412218 C16orf86Q6ZW13 317 aa12.19□□□□□ -0.46
LINC01643-201ENST00000412218 AMOTL1Q8IY63 956 aa12.19□□□□□ -0.46
LINC01643-201ENST00000412218 APPBP2Q92624 585 aa12.19□□□□□ -0.46
LINC01643-201ENST00000412218 OSBP2Q969R2 916 aa12.19□□□□□ -0.46
LINC01643-201ENST00000412218 DDRGK1Q96HY6 314 aa12.19□□□□□ -0.46
LINC01643-201ENST00000412218 STRBPQ96SI9 672 aaKnown RBP12.19□□□□□ -0.46
LINC01643-201ENST00000412218 BACH2Q9BYV9 841 aa12.19□□□□□ -0.46
LINC01643-201ENST00000412218 RNF208Q9H0X6 261 aa12.19□□□□□ -0.46
LINC01643-201ENST00000412218 UNC93B1Q9H1C4 597 aa12.19□□□□□ -0.46
LINC01643-201ENST00000412218 ARPP21Q9UBL0 812 aaPredicted RBP12.19□□□□□ -0.46
LINC01643-201ENST00000412218 GJD2Q9UKL4 321 aa12.19□□□□□ -0.46
LINC01643-201ENST00000412218 MYH7P12883 1935 aa12.19□□□□□ -0.46
LINC01643-201ENST00000412218 ERC2O15083 957 aa12.18□□□□□ -0.46
LINC01643-201ENST00000412218 CNMDO75829 334 aa12.18□□□□□ -0.46
LINC01643-201ENST00000412218 GLRX3O76003 335 aaKnown RBP12.18□□□□□ -0.46
LINC01643-201ENST00000412218 IGHDP01880 384 aa12.18□□□□□ -0.46
LINC01643-201ENST00000412218 ZFYP08048 801 aaPredicted RBP12.18□□□□□ -0.46
LINC01643-201ENST00000412218 MX1P20591 662 aa12.18□□□□□ -0.46
LINC01643-201ENST00000412218 MAPK4P31152 587 aa12.18□□□□□ -0.46
LINC01643-201ENST00000412218 CDK8P49336 464 aa12.18□□□□□ -0.46
LINC01643-201ENST00000412218 Q3C1V9 767 aa12.18□□□□□ -0.46
LINC01643-201ENST00000412218 LBX2Q6XYB7 198 aa12.18□□□□□ -0.46
LINC01643-201ENST00000412218 NKX2-3Q8TAU0 364 aa12.18□□□□□ -0.46
LINC01643-201ENST00000412218 PAGR1Q9BTK6 254 aa12.18□□□□□ -0.46
LINC01643-201ENST00000412218 RPAP3Q9H6T3 665 aaPredicted RBP12.18□□□□□ -0.46
LINC01643-201ENST00000412218 ROBO3Q96MS0 1386 aa12.18□□□□□ -0.46
LINC01643-201ENST00000412218 GSG1L2A8MUP6 293 aa12.17□□□□□ -0.46
LINC01643-201ENST00000412218 M0R2C6 588 aa12.17□□□□□ -0.46
LINC01643-201ENST00000412218 GPAA1O43292 621 aa12.17□□□□□ -0.46
LINC01643-201ENST00000412218 ICA1Q05084 483 aa12.17□□□□□ -0.46
LINC01643-201ENST00000412218 SBK1Q52WX2 424 aa12.17□□□□□ -0.46
LINC01643-201ENST00000412218 GIMAP6Q6P9H5 292 aa12.17□□□□□ -0.46
LINC01643-201ENST00000412218 CLEC10AQ8IUN9 316 aa12.17□□□□□ -0.46
LINC01643-201ENST00000412218 SIAH1Q8IUQ4 282 aa12.17□□□□□ -0.46
LINC01643-201ENST00000412218 U2AF1L4Q8WU68 220 aaKnown RBP12.17□□□□□ -0.46
LINC01643-201ENST00000412218 SOCS4Q8WXH5 440 aa12.17□□□□□ -0.46
LINC01643-201ENST00000412218 CCDC17Q96LX7 622 aa12.17□□□□□ -0.46
LINC01643-201ENST00000412218 PORCNQ9H237 461 aa12.17□□□□□ -0.46
LINC01643-201ENST00000412218 PAK6Q9NQU5 681 aaPredicted RBP12.17□□□□□ -0.46
LINC01643-201ENST00000412218 RABGAP1Q9Y3P9 1069 aa12.17□□□□□ -0.46
LINC01643-201ENST00000412218 PLXNB2O15031 1838 aa12.16□□□□□ -0.46
LINC01643-201ENST00000412218 SPDYE16A6NNV3 312 aaPredicted RBP12.16□□□□□ -0.46
LINC01643-201ENST00000412218 HMGCRP04035 888 aa12.16□□□□□ -0.46
LINC01643-201ENST00000412218 LRRFIP1Q32MZ4 808 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms