RNA–Protein interactions for RNA: ENST00000411993.1

HDAC9-205, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 626 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-205ENST00000411993 CARS2Q9HA77 564 aaKnown RBP8.14□□□□□ -1.11
HDAC9-205ENST00000411993 REV1Q9UBZ9 1251 aa8.14□□□□□ -1.11
HDAC9-205ENST00000411993 CEP131Q9UPN4 1083 aa8.14□□□□□ -1.11
HDAC9-205ENST00000411993 SUPT16HQ9Y5B9 1047 aaKnown RBP8.14□□□□□ -1.11
HDAC9-205ENST00000411993 ST14Q9Y5Y6 855 aa8.14□□□□□ -1.11
HDAC9-205ENST00000411993 HTR3BO95264 441 aa8.13□□□□□ -1.11
HDAC9-205ENST00000411993 TNNI2P48788 182 aa8.13□□□□□ -1.11
HDAC9-205ENST00000411993 TNK2Q07912 1038 aa8.13□□□□□ -1.11
HDAC9-205ENST00000411993 CWF19L2Q2TBE0 894 aaKnown RBP8.13□□□□□ -1.11
HDAC9-205ENST00000411993 FBXO27Q8NI29 283 aa8.13□□□□□ -1.11
HDAC9-205ENST00000411993 LMCD1Q9NZU5 365 aa8.13□□□□□ -1.11
HDAC9-205ENST00000411993 ZSWIM5Q9P217 1185 aa8.13□□□□□ -1.11
HDAC9-205ENST00000411993 POLR3KQ9Y2Y1 108 aaPredicted RBP8.13□□□□□ -1.11
HDAC9-205ENST00000411993 BTBD11A6QL63 1104 aa8.12□□□□□ -1.11
HDAC9-205ENST00000411993 ZNF16P17020 682 aaPredicted RBP8.12□□□□□ -1.11
HDAC9-205ENST00000411993 GARTP22102 1010 aa8.12□□□□□ -1.11
HDAC9-205ENST00000411993 EIF4A3P38919 411 aaKnown RBP8.12□□□□□ -1.11
HDAC9-205ENST00000411993 MFAP1P55081 439 aaKnown RBP8.12□□□□□ -1.11
HDAC9-205ENST00000411993 MLECQ14165 292 aa8.12□□□□□ -1.11
HDAC9-205ENST00000411993 FBXL19Q6PCT2 694 aa8.12□□□□□ -1.11
HDAC9-205ENST00000411993 PIWIL2Q8TC59 973 aaKnown RBP8.12□□□□□ -1.11
HDAC9-205ENST00000411993 UBE2FQ969M7 185 aa8.12□□□□□ -1.11
HDAC9-205ENST00000411993 PRR36Q9H6K5 1346 aa8.11□□□□□ -1.11
HDAC9-205ENST00000411993 CHMP4BP1P59074 171 aa8.11□□□□□ -1.11
HDAC9-205ENST00000411993 SLFN12Q8IYM2 578 aa8.11□□□□□ -1.11
HDAC9-205ENST00000411993 PHACTR4Q8IZ21 702 aa8.11□□□□□ -1.11
HDAC9-205ENST00000411993 TMEM87AQ8NBN3 555 aa8.11□□□□□ -1.11
HDAC9-205ENST00000411993 FAM168AQ92567 244 aa8.11□□□□□ -1.11
HDAC9-205ENST00000411993 GOLGA2P5Q9HBQ8 144 aa8.11□□□□□ -1.11
HDAC9-205ENST00000411993 FLAD1Q8NFF5 587 aa8.1□□□□□ -1.11
HDAC9-205ENST00000411993 PPP1R13LQ8WUF5 828 aa8.1□□□□□ -1.11
HDAC9-205ENST00000411993 KCNH3Q9ULD8 1083 aa8.1□□□□□ -1.11
HDAC9-205ENST00000411993 ROBO2Q9HCK4 1378 aa8.1□□□□□ -1.11
HDAC9-205ENST00000411993 CHURC1-FNTBB4DL54 471 aa8.09□□□□□ -1.11
HDAC9-205ENST00000411993 RBAK-RBAKDNI3L0D1 243 aa8.09□□□□□ -1.11
HDAC9-205ENST00000411993 ZNF296Q8WUU4 475 aaPredicted RBP8.09□□□□□ -1.11
HDAC9-205ENST00000411993 CCDC74BQ96LY2 380 aa8.09□□□□□ -1.11
HDAC9-205ENST00000411993 Q96M66 194 aa8.09□□□□□ -1.11
HDAC9-205ENST00000411993 TRIT1Q9H3H1 467 aaKnown RBP8.09□□□□□ -1.11
HDAC9-205ENST00000411993 BRMS1Q9HCU9 246 aa8.09□□□□□ -1.11
HDAC9-205ENST00000411993 OGFOD2Q6N063 350 aa8.08□□□□□ -1.12
HDAC9-205ENST00000411993 BAHD1Q8TBE0 780 aaPredicted RBP8.08□□□□□ -1.12
HDAC9-205ENST00000411993 RNF141Q8WVD5 230 aa8.08□□□□□ -1.12
HDAC9-205ENST00000411993 LRRC3Q9BY71 257 aa8.08□□□□□ -1.12
HDAC9-205ENST00000411993 KCNQ5Q9NR82 932 aa8.08□□□□□ -1.12
HDAC9-205ENST00000411993 CTNND2Q9UQB3 1225 aa8.08□□□□□ -1.12
HDAC9-205ENST00000411993 PCDHB14Q9Y5E9 798 aa8.08□□□□□ -1.12
HDAC9-205ENST00000411993 CARMIL2Q6F5E8 1435 aa8.07□□□□□ -1.12
HDAC9-205ENST00000411993 GBP1P32455 592 aa8.07□□□□□ -1.12
HDAC9-205ENST00000411993 TMPRSS7Q7RTY8 843 aa8.07□□□□□ -1.12
HDAC9-205ENST00000411993 DTWD2Q8NBA8 298 aa8.07□□□□□ -1.12
HDAC9-205ENST00000411993 CCDC120Q96HB5 630 aa8.07□□□□□ -1.12
HDAC9-205ENST00000411993 KIF2CQ99661 725 aa8.07□□□□□ -1.12
HDAC9-205ENST00000411993 GPATCH2Q9NW75 528 aa8.07□□□□□ -1.12
HDAC9-205ENST00000411993 ADAMTS1Q9UHI8 967 aa8.07□□□□□ -1.12
HDAC9-205ENST00000411993 GREM1O60565 184 aa8.06□□□□□ -1.12
HDAC9-205ENST00000411993 DNAJA2O60884 412 aa8.06□□□□□ -1.12
HDAC9-205ENST00000411993 TPP2P29144 1249 aaPredicted RBP8.06□□□□□ -1.12
HDAC9-205ENST00000411993 AFMP43652 599 aa8.06□□□□□ -1.12
HDAC9-205ENST00000411993 KCNMB1Q16558 191 aa8.06□□□□□ -1.12
HDAC9-205ENST00000411993 SEZ6Q53EL9 994 aa8.06□□□□□ -1.12
HDAC9-205ENST00000411993 ZSWIM9Q86XI8 627 aa8.06□□□□□ -1.12
HDAC9-205ENST00000411993 CREG2Q8IUH2 290 aa8.06□□□□□ -1.12
HDAC9-205ENST00000411993 KREMEN1Q96MU8 473 aa8.06□□□□□ -1.12
HDAC9-205ENST00000411993 ALPK1Q96QP1 1244 aa8.06□□□□□ -1.12
HDAC9-205ENST00000411993 ASPNQ9BXN1 380 aa8.06□□□□□ -1.12
HDAC9-205ENST00000411993 SLAMF8Q9P0V8 285 aa8.06□□□□□ -1.12
HDAC9-205ENST00000411993 RAG1P15918 1043 aa8.05□□□□□ -1.12
HDAC9-205ENST00000411993 ZNF76P36508 570 aa8.05□□□□□ -1.12
HDAC9-205ENST00000411993 CRKP46108 304 aa8.05□□□□□ -1.12
HDAC9-205ENST00000411993 APOBRQ0VD83 1088 aa8.05□□□□□ -1.12
HDAC9-205ENST00000411993 ARSHQ5FYA8 562 aa8.05□□□□□ -1.12
HDAC9-205ENST00000411993 UBP1Q9NZI7 540 aa8.05□□□□□ -1.12
HDAC9-205ENST00000411993 GMIPQ9P107 970 aa8.05□□□□□ -1.12
HDAC9-205ENST00000411993 DUSP13Q9UII6 198 aa8.05□□□□□ -1.12
HDAC9-205ENST00000411993 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.05□□□□□ -1.12
HDAC9-205ENST00000411993 LRRN2O75325 713 aa8.04□□□□□ -1.12
HDAC9-205ENST00000411993 YBX3P16989 372 aaKnown RBP eCLIP8.04□□□□□ -1.12
HDAC9-205ENST00000411993 MCM4P33991 863 aa8.04□□□□□ -1.12
HDAC9-205ENST00000411993 TMEM40Q8WWA1 233 aa8.04□□□□□ -1.12
HDAC9-205ENST00000411993 GPR62Q9BZJ7 368 aa8.04□□□□□ -1.12
HDAC9-205ENST00000411993 DUSP15Q9H1R2 295 aaPredicted RBP8.04□□□□□ -1.12
HDAC9-205ENST00000411993 SLC22A31A6NKX4 558 aa8.03□□□□□ -1.12
HDAC9-205ENST00000411993 WASH4PA8MWX3 477 aa8.03□□□□□ -1.12
HDAC9-205ENST00000411993 ESR1P03372 595 aa8.03□□□□□ -1.12
HDAC9-205ENST00000411993 LTKP29376 864 aa8.03□□□□□ -1.12
HDAC9-205ENST00000411993 GDNFP39905 211 aa8.03□□□□□ -1.12
HDAC9-205ENST00000411993 OVOS1Q6IE37 1185 aa8.03□□□□□ -1.12
HDAC9-205ENST00000411993 GK5Q6ZS86 529 aa8.03□□□□□ -1.12
HDAC9-205ENST00000411993 KIAA0825Q8IV33 1275 aa8.03□□□□□ -1.12
HDAC9-205ENST00000411993 POU5F2Q8N7G0 328 aa8.03□□□□□ -1.12
HDAC9-205ENST00000411993 SPON2Q9BUD6 331 aa8.03□□□□□ -1.12
HDAC9-205ENST00000411993 RGS13O14921 159 aa8.02□□□□□ -1.13
HDAC9-205ENST00000411993 ATE1O95260 518 aa8.02□□□□□ -1.13
HDAC9-205ENST00000411993 ZNF165P49910 485 aa8.02□□□□□ -1.13
HDAC9-205ENST00000411993 RNF4P78317 190 aa8.02□□□□□ -1.13
HDAC9-205ENST00000411993 TTC6Q86TZ1 520 aa8.02□□□□□ -1.13
HDAC9-205ENST00000411993 TSPYL5Q86VY4 417 aaPredicted RBP8.02□□□□□ -1.13
HDAC9-205ENST00000411993 NKD1Q969G9 470 aa8.02□□□□□ -1.13
HDAC9-205ENST00000411993 KIRREL1Q96J84 757 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms