RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 HMGCRP04035 888 aa20.04■□□□□ 0.8
SCAMP4-203ENST00000411971 ERVK-9P63128 1117 aa20.04■□□□□ 0.8
SCAMP4-203ENST00000411971 ERVK-24P63145 666 aa20.04■□□□□ 0.8
SCAMP4-203ENST00000411971 RAB3GAP1Q15042 981 aa20.04■□□□□ 0.8
SCAMP4-203ENST00000411971 CCL14Q16627 93 aa20.04■□□□□ 0.8
SCAMP4-203ENST00000411971 HSP90AB4PQ58FF6 505 aa20.04■□□□□ 0.8
SCAMP4-203ENST00000411971 USP17L2Q6R6M4 530 aa20.04■□□□□ 0.8
SCAMP4-203ENST00000411971 CLASRPQ8N2M8 674 aaKnown RBP20.04■□□□□ 0.8
SCAMP4-203ENST00000411971 GPRC5AQ8NFJ5 357 aa20.04■□□□□ 0.8
SCAMP4-203ENST00000411971 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.04■□□□□ 0.8
SCAMP4-203ENST00000411971 PAWRQ96IZ0 340 aaKnown RBP20.04■□□□□ 0.8
SCAMP4-203ENST00000411971 PRO3102Q9H379 93 aa20.04■□□□□ 0.8
SCAMP4-203ENST00000411971 BOLA2Q9H3K6 86 aa20.04■□□□□ 0.8
SCAMP4-203ENST00000411971 ARMT1Q9H993 441 aa20.04■□□□□ 0.8
SCAMP4-203ENST00000411971 RBM27Q9P2N5 1060 aaKnown RBP20.04■□□□□ 0.8
SCAMP4-203ENST00000411971 RCAN3Q9UKA8 241 aa20.04■□□□□ 0.8
SCAMP4-203ENST00000411971 PARP14Q460N5 1801 aa20.04■□□□□ 0.8
SCAMP4-203ENST00000411971 A0A1W2PRG0 241 aa20.03■□□□□ 0.8
SCAMP4-203ENST00000411971 SMARCA5O60264 1052 aaPredicted RBP20.03■□□□□ 0.8
SCAMP4-203ENST00000411971 SEPT2Q15019 361 aa20.03■□□□□ 0.8
SCAMP4-203ENST00000411971 ABCB5Q2M3G0 1257 aa20.03■□□□□ 0.8
SCAMP4-203ENST00000411971 CERKLQ49MI3 558 aaPredicted RBP20.03■□□□□ 0.8
SCAMP4-203ENST00000411971 KIAA1755Q5JYT7 1200 aa20.03■□□□□ 0.8
SCAMP4-203ENST00000411971 TTC6Q86TZ1 520 aa20.03■□□□□ 0.8
SCAMP4-203ENST00000411971 CLEC10AQ8IUN9 316 aa20.03■□□□□ 0.8
SCAMP4-203ENST00000411971 DYNLL2Q96FJ2 89 aa20.03■□□□□ 0.8
SCAMP4-203ENST00000411971 DCP1AQ9NPI6 582 aaPredicted RBP20.03■□□□□ 0.8
SCAMP4-203ENST00000411971 IFIT2P09913 472 aaKnown RBP20.02■□□□□ 0.8
SCAMP4-203ENST00000411971 VCAM1P19320 739 aa20.02■□□□□ 0.8
SCAMP4-203ENST00000411971 MORN1Q5T089 497 aa20.02■□□□□ 0.8
SCAMP4-203ENST00000411971 MAP3K21Q5TCX8 1036 aa20.02■□□□□ 0.8
SCAMP4-203ENST00000411971 CERS3Q8IU89 383 aa20.02■□□□□ 0.8
SCAMP4-203ENST00000411971 KIAA1683Q9H0B3 1180 aa20.02■□□□□ 0.8
SCAMP4-203ENST00000411971 CYP2D7A0A087X1C5 515 aa20.01■□□□□ 0.79
SCAMP4-203ENST00000411971 POLR3DP05423 398 aaPredicted RBP20.01■□□□□ 0.79
SCAMP4-203ENST00000411971 ADD2P35612 726 aa20.01■□□□□ 0.79
SCAMP4-203ENST00000411971 TTF1Q15361 905 aaPredicted RBP20.01■□□□□ 0.79
SCAMP4-203ENST00000411971 CATSPERGQ6ZRH7 1159 aa20.01■□□□□ 0.79
SCAMP4-203ENST00000411971 GPR142Q7Z601 462 aa20.01■□□□□ 0.79
SCAMP4-203ENST00000411971 FEZ1Q99689 392 aa20.01■□□□□ 0.79
SCAMP4-203ENST00000411971 MCM9Q9NXL9 1143 aa20.01■□□□□ 0.79
SCAMP4-203ENST00000411971 BTBD7Q9P203 1132 aa20.01■□□□□ 0.79
SCAMP4-203ENST00000411971 A0A0G2JMZ2 1700 aa20.01■□□□□ 0.79
SCAMP4-203ENST00000411971 RPTORQ8N122 1335 aa20.01■□□□□ 0.79
SCAMP4-203ENST00000411971 LAMA3Q16787 3333 aa20■□□□□ 0.79
SCAMP4-203ENST00000411971 RAB11FIP3O75154 756 aa20■□□□□ 0.79
SCAMP4-203ENST00000411971 MS4A1P11836 297 aa20■□□□□ 0.79
SCAMP4-203ENST00000411971 SIAH1Q8IUQ4 282 aa20■□□□□ 0.79
SCAMP4-203ENST00000411971 HTATIP2Q9BUP3 242 aa20■□□□□ 0.79
SCAMP4-203ENST00000411971 CRNKL1Q9BZJ0 848 aaKnown RBP20■□□□□ 0.79
SCAMP4-203ENST00000411971 PAG1Q9NWQ8 432 aa20■□□□□ 0.79
SCAMP4-203ENST00000411971 USP17L15C9J2P7 530 aa19.99■□□□□ 0.79
SCAMP4-203ENST00000411971 USP17L13C9JLJ4 530 aa19.99■□□□□ 0.79
SCAMP4-203ENST00000411971 USP17L11C9JVI0 530 aa19.99■□□□□ 0.79
SCAMP4-203ENST00000411971 USP17L18D6R9N7 530 aa19.99■□□□□ 0.79
SCAMP4-203ENST00000411971 USP17L22D6RA61 530 aa19.99■□□□□ 0.79
SCAMP4-203ENST00000411971 USP17L17D6RBQ6 530 aa19.99■□□□□ 0.79
SCAMP4-203ENST00000411971 USP17L19D6RCP7 530 aa19.99■□□□□ 0.79
SCAMP4-203ENST00000411971 USP17L20D6RJB6 530 aa19.99■□□□□ 0.79
SCAMP4-203ENST00000411971 HMMRO75330 724 aa19.99■□□□□ 0.79
SCAMP4-203ENST00000411971 ATP5JP18859 108 aa19.99■□□□□ 0.79
SCAMP4-203ENST00000411971 USP17L24Q0WX57 530 aa19.99■□□□□ 0.79
SCAMP4-203ENST00000411971 TMED8Q6PL24 325 aaPredicted RBP19.99■□□□□ 0.79
SCAMP4-203ENST00000411971 HAUS7Q99871 368 aa19.99■□□□□ 0.79
SCAMP4-203ENST00000411971 NUDT12Q9BQG2 462 aa19.99■□□□□ 0.79
SCAMP4-203ENST00000411971 FLRT1Q9NZU1 646 aa19.99■□□□□ 0.79
SCAMP4-203ENST00000411971 DNAH12Q6ZR08 3092 aa19.99■□□□□ 0.79
SCAMP4-203ENST00000411971 COL11A1P12107 1806 aaPredicted RBP19.98■□□□□ 0.79
SCAMP4-203ENST00000411971 SPDYE16A6NNV3 312 aaPredicted RBP19.98■□□□□ 0.79
SCAMP4-203ENST00000411971 MBD4O95243 580 aa19.98■□□□□ 0.79
SCAMP4-203ENST00000411971 PRKAR2AP13861 404 aaKnown RBP19.98■□□□□ 0.79
SCAMP4-203ENST00000411971 CCND3P30281 292 aaPredicted RBP19.98■□□□□ 0.79
SCAMP4-203ENST00000411971 CACNB2Q08289 660 aaPredicted RBP19.98■□□□□ 0.79
SCAMP4-203ENST00000411971 RPAP3Q9H6T3 665 aaPredicted RBP19.98■□□□□ 0.79
SCAMP4-203ENST00000411971 HMX1Q9NP08 348 aaPredicted RBP19.98■□□□□ 0.79
SCAMP4-203ENST00000411971 XRCC5P13010 732 aaKnown RBP19.97■□□□□ 0.79
SCAMP4-203ENST00000411971 MAPK4P31152 587 aa19.97■□□□□ 0.79
SCAMP4-203ENST00000411971 PLEKHH3Q7Z736 793 aa19.97■□□□□ 0.79
SCAMP4-203ENST00000411971 RABGAP1Q9Y3P9 1069 aa19.97■□□□□ 0.79
SCAMP4-203ENST00000411971 AKR1B1P15121 316 aa19.96■□□□□ 0.79
SCAMP4-203ENST00000411971 LBX2Q6XYB7 198 aa19.96■□□□□ 0.79
SCAMP4-203ENST00000411971 SOCS4Q8WXH5 440 aa19.96■□□□□ 0.79
SCAMP4-203ENST00000411971 CABP5Q9NP86 173 aa19.96■□□□□ 0.79
SCAMP4-203ENST00000411971 OGDHLQ9ULD0 1010 aa19.96■□□□□ 0.79
SCAMP4-203ENST00000411971 PFASO15067 1338 aa19.96■□□□□ 0.79
SCAMP4-203ENST00000411971 GREB1LQ9C091 1923 aaPredicted RBP19.96■□□□□ 0.79
SCAMP4-203ENST00000411971 ZNFX1Q9P2E3 1918 aaKnown RBP19.96■□□□□ 0.79
SCAMP4-203ENST00000411971 MPHOSPH10O00566 681 aaKnown RBP19.95■□□□□ 0.78
SCAMP4-203ENST00000411971 EVI5O60447 810 aa19.95■□□□□ 0.78
SCAMP4-203ENST00000411971 USP14P54578 494 aa19.95■□□□□ 0.78
SCAMP4-203ENST00000411971 TSHZ3Q63HK5 1081 aa19.95■□□□□ 0.78
SCAMP4-203ENST00000411971 LHX8Q68G74 356 aa19.95■□□□□ 0.78
SCAMP4-203ENST00000411971 PUS7LQ9H0K6 701 aaKnown RBP19.95■□□□□ 0.78
SCAMP4-203ENST00000411971 ZKSCAN1P17029 563 aaPredicted RBP19.94■□□□□ 0.78
SCAMP4-203ENST00000411971 MAP2K5Q13163 448 aa19.94■□□□□ 0.78
SCAMP4-203ENST00000411971 NECAB2Q7Z6G3 386 aa19.94■□□□□ 0.78
SCAMP4-203ENST00000411971 NPLOC4Q8TAT6 608 aa19.94■□□□□ 0.78
SCAMP4-203ENST00000411971 USP17L12C9JPN9 530 aa19.93■□□□□ 0.78
SCAMP4-203ENST00000411971 USP17L21D6R901 530 aa19.93■□□□□ 0.78
SCAMP4-203ENST00000411971 IGHA2P01877 340 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 195 ms