RNA–Protein interactions for RNA: ENST00000411337.1

RN7SKP53-201, Transcript of RNA, 7SK small nuclear pseudogene 53, humanhuman

BASIC

Gene RN7SKP53, Length 315 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP53-201ENST00000411337 KRT76Q01546 638 aa4.5□□□□□ -1.69
RN7SKP53-201ENST00000411337 PTPN12Q05209 780 aaKnown RBP4.5□□□□□ -1.69
RN7SKP53-201ENST00000411337 PSMD2Q13200 908 aa4.5□□□□□ -1.69
RN7SKP53-201ENST00000411337 C4orf17Q53FE4 359 aa4.5□□□□□ -1.69
RN7SKP53-201ENST00000411337 ZNF394Q53GI3 561 aa4.5□□□□□ -1.69
RN7SKP53-201ENST00000411337 KSR2Q6VAB6 950 aa4.5□□□□□ -1.69
RN7SKP53-201ENST00000411337 ITPRIPQ8IWB1 547 aa4.5□□□□□ -1.69
RN7SKP53-201ENST00000411337 ZNF654Q8IZM8 581 aa4.5□□□□□ -1.69
RN7SKP53-201ENST00000411337 ZSCAN1Q8NBB4 408 aa4.5□□□□□ -1.69
RN7SKP53-201ENST00000411337 HELQQ8TDG4 1101 aa4.5□□□□□ -1.69
RN7SKP53-201ENST00000411337 XAGE3Q8WTP9 111 aa4.5□□□□□ -1.69
RN7SKP53-201ENST00000411337 MKL1Q969V6 931 aa4.5□□□□□ -1.69
RN7SKP53-201ENST00000411337 COL26A1Q96A83 441 aa4.5□□□□□ -1.69
RN7SKP53-201ENST00000411337 ZNF837Q96EG3 531 aaPredicted RBP4.5□□□□□ -1.69
RN7SKP53-201ENST00000411337 CITED4Q96RK1 184 aa4.5□□□□□ -1.69
RN7SKP53-201ENST00000411337 COL25A1Q9BXS0 654 aaPredicted RBP4.5□□□□□ -1.69
RN7SKP53-201ENST00000411337 TEX13AQ9BXU3 409 aaPredicted RBP4.5□□□□□ -1.69
RN7SKP53-201ENST00000411337 SPC25Q9HBM1 224 aa4.5□□□□□ -1.69
RN7SKP53-201ENST00000411337 VTI1BQ9UEU0 232 aa4.5□□□□□ -1.69
RN7SKP53-201ENST00000411337 PRR12Q9ULL5 1215 aa4.5□□□□□ -1.69
RN7SKP53-201ENST00000411337 DDX19BQ9UMR2 479 aa4.5□□□□□ -1.69
RN7SKP53-201ENST00000411337 ZBTB1Q9Y2K1 713 aa4.5□□□□□ -1.69
RN7SKP53-201ENST00000411337 DDX60Q8IY21 1712 aaKnown RBP4.49□□□□□ -1.69
RN7SKP53-201ENST00000411337 CNTNAP4Q9C0A0 1308 aa4.49□□□□□ -1.69
RN7SKP53-201ENST00000411337 PI4KAP2A4QPH2 592 aa4.49□□□□□ -1.69
RN7SKP53-201ENST00000411337 K7ELQ4 463 aaPredicted RBP4.49□□□□□ -1.69
RN7SKP53-201ENST00000411337 FAM13AO94988 1023 aa4.49□□□□□ -1.69
RN7SKP53-201ENST00000411337 MYL6BP14649 208 aa4.49□□□□□ -1.69
RN7SKP53-201ENST00000411337 ATF4P18848 351 aaPredicted RBP4.49□□□□□ -1.69
RN7SKP53-201ENST00000411337 PHKA2P46019 1235 aa4.49□□□□□ -1.69
RN7SKP53-201ENST00000411337 CRKLP46109 303 aaKnown RBP4.49□□□□□ -1.69
RN7SKP53-201ENST00000411337 GJA8P48165 433 aa4.49□□□□□ -1.69
RN7SKP53-201ENST00000411337 CCT4P50991 539 aaKnown RBP4.49□□□□□ -1.69
RN7SKP53-201ENST00000411337 RHBDL3P58872 404 aa4.49□□□□□ -1.69
RN7SKP53-201ENST00000411337 AAMPQ13685 434 aa4.49□□□□□ -1.69
RN7SKP53-201ENST00000411337 MTFR1Q15390 333 aa4.49□□□□□ -1.69
RN7SKP53-201ENST00000411337 DBN1Q16643 649 aa4.49□□□□□ -1.69
RN7SKP53-201ENST00000411337 RNFT1Q5M7Z0 435 aa4.49□□□□□ -1.69
RN7SKP53-201ENST00000411337 BEND3Q5T5X7 828 aa4.49□□□□□ -1.69
RN7SKP53-201ENST00000411337 CCDC102BQ68D86 513 aa4.49□□□□□ -1.69
RN7SKP53-201ENST00000411337 INTS5Q6P9B9 1019 aaKnown RBP4.49□□□□□ -1.69
RN7SKP53-201ENST00000411337 RIPOR1Q6ZS17 1223 aa4.49□□□□□ -1.69
RN7SKP53-201ENST00000411337 TSHZ1Q6ZSZ6 1077 aa4.49□□□□□ -1.69
RN7SKP53-201ENST00000411337 COPS6Q7L5N1 327 aa4.49□□□□□ -1.69
RN7SKP53-201ENST00000411337 FMNL3Q8IVF7 1028 aa4.49□□□□□ -1.69
RN7SKP53-201ENST00000411337 PI4KAP1Q8N8J0 262 aa4.49□□□□□ -1.69
RN7SKP53-201ENST00000411337 LINC00116Q8NCU8 138 aa4.49□□□□□ -1.69
RN7SKP53-201ENST00000411337 DNAAF4Q8WXU2 420 aa4.49□□□□□ -1.69
RN7SKP53-201ENST00000411337 SLC39A13Q96H72 371 aa4.49□□□□□ -1.69
RN7SKP53-201ENST00000411337 MRFAP1L1Q96HT8 127 aa4.49□□□□□ -1.69
RN7SKP53-201ENST00000411337 FAM129BQ96TA1 746 aa4.49□□□□□ -1.69
RN7SKP53-201ENST00000411337 GAS2L1Q99501 681 aaPredicted RBP4.49□□□□□ -1.69
RN7SKP53-201ENST00000411337 MKNK1Q9BUB5 465 aa4.49□□□□□ -1.69
RN7SKP53-201ENST00000411337 ZBTB40Q9NUA8 1239 aa4.49□□□□□ -1.69
RN7SKP53-201ENST00000411337 MAP3K2Q9Y2U5 619 aa4.49□□□□□ -1.69
RN7SKP53-201ENST00000411337 PCDHGB7Q9Y5F8 929 aa4.49□□□□□ -1.69
RN7SKP53-201ENST00000411337 KDM2BQ8NHM5 1336 aa4.48□□□□□ -1.69
RN7SKP53-201ENST00000411337 FAM181BA6NEQ2 426 aa4.48□□□□□ -1.69
RN7SKP53-201ENST00000411337 A6NJY4 79 aa4.48□□□□□ -1.69
RN7SKP53-201ENST00000411337 CDK2AP1O14519 115 aa4.48□□□□□ -1.69
RN7SKP53-201ENST00000411337 BACH1O14867 736 aa4.48□□□□□ -1.69
RN7SKP53-201ENST00000411337 FZD6O60353 706 aa4.48□□□□□ -1.69
RN7SKP53-201ENST00000411337 ALDH1L1O75891 902 aa4.48□□□□□ -1.69
RN7SKP53-201ENST00000411337 TRIM37O94972 964 aa4.48□□□□□ -1.69
RN7SKP53-201ENST00000411337 STARD3NLO95772 234 aa4.48□□□□□ -1.69
RN7SKP53-201ENST00000411337 DDX58O95786 925 aaKnown RBP4.48□□□□□ -1.69
RN7SKP53-201ENST00000411337 IGKV5-2P06315 115 aa4.48□□□□□ -1.69
RN7SKP53-201ENST00000411337 PDGFRBP09619 1106 aa4.48□□□□□ -1.69
RN7SKP53-201ENST00000411337 IL6STP40189 918 aaPredicted RBP4.48□□□□□ -1.69
RN7SKP53-201ENST00000411337 MAPK8P45983 427 aa4.48□□□□□ -1.69
RN7SKP53-201ENST00000411337 EIF5P55010 431 aaKnown RBP4.48□□□□□ -1.69
RN7SKP53-201ENST00000411337 SETQ01105 290 aaPredicted RBP4.48□□□□□ -1.69
RN7SKP53-201ENST00000411337 AIMP1Q12904 312 aaKnown RBP4.48□□□□□ -1.69
RN7SKP53-201ENST00000411337 FOXD4L6Q3SYB3 417 aaPredicted RBP4.48□□□□□ -1.69
RN7SKP53-201ENST00000411337 FOXR1Q6PIV2 292 aa4.48□□□□□ -1.69
RN7SKP53-201ENST00000411337 SLC4A10Q6U841 1118 aa4.48□□□□□ -1.69
RN7SKP53-201ENST00000411337 FOXD4L3Q6VB84 417 aaPredicted RBP4.48□□□□□ -1.69
RN7SKP53-201ENST00000411337 TTLL7Q6ZT98 887 aa4.48□□□□□ -1.69
RN7SKP53-201ENST00000411337 ZNF295-AS1Q8N0V1 137 aa4.48□□□□□ -1.69
RN7SKP53-201ENST00000411337 PLBD2Q8NHP8 589 aa4.48□□□□□ -1.69
RN7SKP53-201ENST00000411337 TPCN2Q8NHX9 752 aa4.48□□□□□ -1.69
RN7SKP53-201ENST00000411337 CNTNAP3BQ96NU0 1288 aa4.48□□□□□ -1.69
RN7SKP53-201ENST00000411337 MEIS3Q99687 375 aa4.48□□□□□ -1.69
RN7SKP53-201ENST00000411337 METTL22Q9BUU2 404 aaPredicted RBP4.48□□□□□ -1.69
RN7SKP53-201ENST00000411337 CFHR5Q9BXR6 569 aa4.48□□□□□ -1.69
RN7SKP53-201ENST00000411337 NIFKQ9BYG3 293 aaKnown RBP4.48□□□□□ -1.69
RN7SKP53-201ENST00000411337 CNTNAP3Q9BZ76 1288 aa4.48□□□□□ -1.69
RN7SKP53-201ENST00000411337 LRRC4BQ9NT99 713 aa4.48□□□□□ -1.69
RN7SKP53-201ENST00000411337 TYW1Q9NV66 732 aaKnown RBP4.48□□□□□ -1.69
RN7SKP53-201ENST00000411337 CCDC87Q9NVE4 849 aa4.48□□□□□ -1.69
RN7SKP53-201ENST00000411337 ZNF358Q9NW07 568 aa4.48□□□□□ -1.69
RN7SKP53-201ENST00000411337 SERTAD1Q9UHV2 236 aa4.48□□□□□ -1.69
RN7SKP53-201ENST00000411337 CCNL1Q9UK58 526 aaPredicted RBP4.48□□□□□ -1.69
RN7SKP53-201ENST00000411337 COL15A1P39059 1388 aa4.48□□□□□ -1.69
RN7SKP53-201ENST00000411337 A0A1B0GUL6 1792 aa4.48□□□□□ -1.69
RN7SKP53-201ENST00000411337 UTYO14607 1347 aa4.47□□□□□ -1.69
RN7SKP53-201ENST00000411337 MAP3K15Q6ZN16 1313 aa4.47□□□□□ -1.69
RN7SKP53-201ENST00000411337 SPEF2Q9C093 1822 aa4.47□□□□□ -1.69
RN7SKP53-201ENST00000411337 NEURL1BA8MQ27 555 aa4.47□□□□□ -1.69
RN7SKP53-201ENST00000411337 PLSCR1O15162 318 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms