RNA–Protein interactions for RNA: ENST00000410940.1

RNU4-78P-201, Transcript of RNA, U4 small nuclear 78, pseudogene, humanhuman

BASIC

Gene RNU4-78P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-78P-201ENST00000410940 CDC6Q99741 560 aa5□□□□□ -1.61
RNU4-78P-201ENST00000410940 NCOA5Q9HCD5 579 aaKnown RBP5□□□□□ -1.61
RNU4-78P-201ENST00000410940 NDFIP2Q9NV92 336 aa5□□□□□ -1.61
RNU4-78P-201ENST00000410940 GOLGA6AQ9NYA3 693 aa5□□□□□ -1.61
RNU4-78P-201ENST00000410940 ADAM30Q9UKF2 790 aa5□□□□□ -1.61
RNU4-78P-201ENST00000410940 THRAP3Q9Y2W1 955 aaKnown RBP5□□□□□ -1.61
RNU4-78P-201ENST00000410940 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5□□□□□ -1.61
RNU4-78P-201ENST00000410940 TRAV20A0A0B4J274 112 aa4.99□□□□□ -1.61
RNU4-78P-201ENST00000410940 METTL12A8MUP2 240 aa4.99□□□□□ -1.61
RNU4-78P-201ENST00000410940 ADCY3O60266 1144 aa4.99□□□□□ -1.61
RNU4-78P-201ENST00000410940 HTR3BO95264 441 aa4.99□□□□□ -1.61
RNU4-78P-201ENST00000410940 APBA3O96018 575 aa4.99□□□□□ -1.61
RNU4-78P-201ENST00000410940 CYP11A1P05108 521 aa4.99□□□□□ -1.61
RNU4-78P-201ENST00000410940 GSTP1P09211 210 aaKnown RBP4.99□□□□□ -1.61
RNU4-78P-201ENST00000410940 NME1P15531 152 aaKnown RBP4.99□□□□□ -1.61
RNU4-78P-201ENST00000410940 GNALP38405 381 aa4.99□□□□□ -1.61
RNU4-78P-201ENST00000410940 GUCY2FP51841 1108 aa4.99□□□□□ -1.61
RNU4-78P-201ENST00000410940 SLC10A6Q3KNW5 377 aa4.99□□□□□ -1.61
RNU4-78P-201ENST00000410940 RGL3Q3MIN7 710 aa4.99□□□□□ -1.61
RNU4-78P-201ENST00000410940 TMEM201Q5SNT2 666 aa4.99□□□□□ -1.61
RNU4-78P-201ENST00000410940 UNC5AQ6ZN44 842 aa4.99□□□□□ -1.61
RNU4-78P-201ENST00000410940 TSHZ1Q6ZSZ6 1077 aa4.99□□□□□ -1.61
RNU4-78P-201ENST00000410940 NLRC3Q7RTR2 1065 aa4.99□□□□□ -1.61
RNU4-78P-201ENST00000410940 AFAP1L2Q8N4X5 818 aa4.99□□□□□ -1.61
RNU4-78P-201ENST00000410940 ZNF526Q8TF50 670 aaPredicted RBP4.99□□□□□ -1.61
RNU4-78P-201ENST00000410940 SMARCC1Q92922 1105 aaPredicted RBP4.99□□□□□ -1.61
RNU4-78P-201ENST00000410940 WNT8BQ93098 351 aa4.99□□□□□ -1.61
RNU4-78P-201ENST00000410940 KISS1RQ969F8 398 aaPredicted RBP4.99□□□□□ -1.61
RNU4-78P-201ENST00000410940 POP1Q99575 1024 aaKnown RBP4.99□□□□□ -1.61
RNU4-78P-201ENST00000410940 MUC3BQ9H195 1237 aa4.99□□□□□ -1.61
RNU4-78P-201ENST00000410940 CNNM2Q9H8M5 875 aa4.99□□□□□ -1.61
RNU4-78P-201ENST00000410940 SOX13Q9UN79 622 aa4.99□□□□□ -1.61
RNU4-78P-201ENST00000410940 POLR3KQ9Y2Y1 108 aaPredicted RBP4.99□□□□□ -1.61
RNU4-78P-201ENST00000410940 SPDYE3A6NKU9 549 aa4.98□□□□□ -1.61
RNU4-78P-201ENST00000410940 GSG1L2A8MUP6 293 aa4.98□□□□□ -1.61
RNU4-78P-201ENST00000410940 GFRA2O00451 464 aa4.98□□□□□ -1.61
RNU4-78P-201ENST00000410940 CREB3O43889 395 aa4.98□□□□□ -1.61
RNU4-78P-201ENST00000410940 EFCAB14O75071 495 aa4.98□□□□□ -1.61
RNU4-78P-201ENST00000410940 POU3F3P20264 500 aaPredicted RBP4.98□□□□□ -1.61
RNU4-78P-201ENST00000410940 POU3F2P20265 443 aaPredicted RBP4.98□□□□□ -1.61
RNU4-78P-201ENST00000410940 FLT3P36888 993 aa4.98□□□□□ -1.61
RNU4-78P-201ENST00000410940 ARL4DP49703 201 aa4.98□□□□□ -1.61
RNU4-78P-201ENST00000410940 FAPQ12884 760 aa4.98□□□□□ -1.61
RNU4-78P-201ENST00000410940 DHCR24Q15392 516 aa4.98□□□□□ -1.61
RNU4-78P-201ENST00000410940 HSP90AB4PQ58FF6 505 aa4.98□□□□□ -1.61
RNU4-78P-201ENST00000410940 PRRT3Q5FWE3 981 aa4.98□□□□□ -1.61
RNU4-78P-201ENST00000410940 CEP135Q66GS9 1140 aa4.98□□□□□ -1.61
RNU4-78P-201ENST00000410940 TTC9Q92623 222 aa4.98□□□□□ -1.61
RNU4-78P-201ENST00000410940 BHMTQ93088 406 aa4.98□□□□□ -1.61
RNU4-78P-201ENST00000410940 NSUN5Q96P11 429 aaKnown RBP4.98□□□□□ -1.61
RNU4-78P-201ENST00000410940 PUS7LQ9H0K6 701 aaKnown RBP4.98□□□□□ -1.61
RNU4-78P-201ENST00000410940 RASSF4Q9H2L5 321 aa4.98□□□□□ -1.61
RNU4-78P-201ENST00000410940 BSDC1Q9NW68 430 aaPredicted RBP4.98□□□□□ -1.61
RNU4-78P-201ENST00000410940 ZNF214Q9UL59 606 aaPredicted RBP4.98□□□□□ -1.61
RNU4-78P-201ENST00000410940 TRBV23-1A0A0A0MS06 115 aa4.97□□□□□ -1.61
RNU4-78P-201ENST00000410940 ANKRD34BA5PLL1 514 aa4.97□□□□□ -1.61
RNU4-78P-201ENST00000410940 SLC22A31A6NKX4 558 aa4.97□□□□□ -1.61
RNU4-78P-201ENST00000410940 UPK3BL1B0FP48 263 aa4.97□□□□□ -1.61
RNU4-78P-201ENST00000410940 UPK3BL2E5RIL1 263 aa4.97□□□□□ -1.61
RNU4-78P-201ENST00000410940 ESRRAP11474 423 aaPredicted RBP4.97□□□□□ -1.61
RNU4-78P-201ENST00000410940 ADH6P28332 368 aa4.97□□□□□ -1.61
RNU4-78P-201ENST00000410940 SUMO1P63165 101 aaKnown RBP4.97□□□□□ -1.61
RNU4-78P-201ENST00000410940 IKBKEQ14164 716 aa4.97□□□□□ -1.61
RNU4-78P-201ENST00000410940 ZNF423Q2M1K9 1284 aa4.97□□□□□ -1.61
RNU4-78P-201ENST00000410940 MRM1Q6IN84 353 aaKnown RBP4.97□□□□□ -1.61
RNU4-78P-201ENST00000410940 KIAA1211LQ6NV74 962 aa4.97□□□□□ -1.61
RNU4-78P-201ENST00000410940 RUFY4Q6ZNE9 571 aa4.97□□□□□ -1.61
RNU4-78P-201ENST00000410940 VN1R5Q7Z5H4 357 aa4.97□□□□□ -1.61
RNU4-78P-201ENST00000410940 PDZD3Q86UT5 571 aa4.97□□□□□ -1.61
RNU4-78P-201ENST00000410940 LRRTM3Q86VH5 581 aa4.97□□□□□ -1.61
RNU4-78P-201ENST00000410940 FCHSD1Q86WN1 690 aa4.97□□□□□ -1.61
RNU4-78P-201ENST00000410940 ANKLE2Q86XL3 938 aa4.97□□□□□ -1.61
RNU4-78P-201ENST00000410940 PASD1Q8IV76 773 aa4.97□□□□□ -1.61
RNU4-78P-201ENST00000410940 CHPFQ8IZ52 775 aa4.97□□□□□ -1.61
RNU4-78P-201ENST00000410940 MYO1HQ8N1T3 1032 aa4.97□□□□□ -1.61
RNU4-78P-201ENST00000410940 DDX1Q92499 740 aaKnown RBP4.97□□□□□ -1.61
RNU4-78P-201ENST00000410940 ATG4CQ96DT6 458 aa4.97□□□□□ -1.61
RNU4-78P-201ENST00000410940 AVENQ9NQS1 362 aaPredicted RBP4.97□□□□□ -1.61
RNU4-78P-201ENST00000410940 FRRS1LQ9P0K9 344 aa4.97□□□□□ -1.61
RNU4-78P-201ENST00000410940 KLF15Q9UIH9 416 aa4.97□□□□□ -1.61
RNU4-78P-201ENST00000410940 MRPS23Q9Y3D9 190 aaKnown RBP4.97□□□□□ -1.61
RNU4-78P-201ENST00000410940 PHLDB1Q86UU1 1377 aa4.96□□□□□ -1.62
RNU4-78P-201ENST00000410940 B2RBV5 119 aa4.96□□□□□ -1.62
RNU4-78P-201ENST00000410940 B4E1Z4 1266 aa4.96□□□□□ -1.62
RNU4-78P-201ENST00000410940 IRS4O14654 1257 aaPredicted RBP4.96□□□□□ -1.62
RNU4-78P-201ENST00000410940 ZEB2O60315 1214 aa4.96□□□□□ -1.62
RNU4-78P-201ENST00000410940 GRIN3BO60391 1043 aa4.96□□□□□ -1.62
RNU4-78P-201ENST00000410940 SIN3BO75182 1162 aa4.96□□□□□ -1.62
RNU4-78P-201ENST00000410940 TRPA1O75762 1119 aa4.96□□□□□ -1.62
RNU4-78P-201ENST00000410940 FGFR1P11362 822 aa4.96□□□□□ -1.62
RNU4-78P-201ENST00000410940 ACPPP15309 386 aa4.96□□□□□ -1.62
RNU4-78P-201ENST00000410940 ELNP15502 786 aa4.96□□□□□ -1.62
RNU4-78P-201ENST00000410940 ZNF157P51786 506 aaPredicted RBP4.96□□□□□ -1.62
RNU4-78P-201ENST00000410940 NEK2P51955 445 aa4.96□□□□□ -1.62
RNU4-78P-201ENST00000410940 YARSP54577 528 aaKnown RBP4.96□□□□□ -1.62
RNU4-78P-201ENST00000410940 SAFB2Q14151 953 aaKnown RBP eCLIP4.96□□□□□ -1.62
RNU4-78P-201ENST00000410940 BRD3Q15059 726 aa4.96□□□□□ -1.62
RNU4-78P-201ENST00000410940 ZRSR2Q15696 482 aaKnown RBP4.96□□□□□ -1.62
RNU4-78P-201ENST00000410940 GNPTABQ3T906 1256 aa4.96□□□□□ -1.62
RNU4-78P-201ENST00000410940 TRIM61Q5EBN2 209 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms