RNA–Protein interactions for RNA: ENST00000410704.1

RN7SKP54-201, Transcript of RNA, 7SK small nuclear pseudogene 54, humanhuman

BASIC

Gene RN7SKP54, Length 269 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP54-201ENST00000410704 LRRC2Q9BYS8 371 aa11.86□□□□□ -0.51
RN7SKP54-201ENST00000410704 ALDH8A1Q9H2A2 487 aaPredicted RBP11.86□□□□□ -0.51
RN7SKP54-201ENST00000410704 AS3MTQ9HBK9 375 aa11.86□□□□□ -0.51
RN7SKP54-201ENST00000410704 ARHGEF10LQ9HCE6 1279 aa11.86□□□□□ -0.51
RN7SKP54-201ENST00000410704 MTMR4Q9NYA4 1195 aa11.86□□□□□ -0.51
RN7SKP54-201ENST00000410704 STX8Q9UNK0 236 aa11.86□□□□□ -0.51
RN7SKP54-201ENST00000410704 PAPPA2Q9BXP8 1791 aa11.86□□□□□ -0.51
RN7SKP54-201ENST00000410704 PASKQ96RG2 1323 aa11.86□□□□□ -0.51
RN7SKP54-201ENST00000410704 IGKV6D-41A0A0C4DH26 115 aa11.85□□□□□ -0.51
RN7SKP54-201ENST00000410704 CCDC69A6NI79 296 aa11.85□□□□□ -0.51
RN7SKP54-201ENST00000410704 USP17L5A8MUK1 530 aa11.85□□□□□ -0.51
RN7SKP54-201ENST00000410704 UBE2Q2LH0YL09 131 aa11.85□□□□□ -0.51
RN7SKP54-201ENST00000410704 SH2B2O14492 632 aaPredicted RBP11.85□□□□□ -0.51
RN7SKP54-201ENST00000410704 NMT2O60551 498 aa11.85□□□□□ -0.51
RN7SKP54-201ENST00000410704 VGLL4Q14135 290 aa11.85□□□□□ -0.51
RN7SKP54-201ENST00000410704 SYNE3Q6ZMZ3 975 aa11.85□□□□□ -0.51
RN7SKP54-201ENST00000410704 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.85□□□□□ -0.51
RN7SKP54-201ENST00000410704 MOB2Q70IA6 237 aa11.85□□□□□ -0.51
RN7SKP54-201ENST00000410704 ENAHQ8N8S7 591 aaPredicted RBP11.85□□□□□ -0.51
RN7SKP54-201ENST00000410704 NKX2-3Q8TAU0 364 aa11.85□□□□□ -0.51
RN7SKP54-201ENST00000410704 IGDCC4Q8TDY8 1250 aa11.85□□□□□ -0.51
RN7SKP54-201ENST00000410704 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.85□□□□□ -0.51
RN7SKP54-201ENST00000410704 TBC1D2Q9BYX2 928 aa11.85□□□□□ -0.51
RN7SKP54-201ENST00000410704 SH2D4AQ9H788 454 aa11.85□□□□□ -0.51
RN7SKP54-201ENST00000410704 KAT14Q9H8E8 782 aa11.85□□□□□ -0.51
RN7SKP54-201ENST00000410704 IL17RBQ9NRM6 502 aa11.85□□□□□ -0.51
RN7SKP54-201ENST00000410704 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.85□□□□□ -0.51
RN7SKP54-201ENST00000410704 NYAP2Q9P242 653 aa11.85□□□□□ -0.51
RN7SKP54-201ENST00000410704 CLIP2Q9UDT6 1046 aa11.85□□□□□ -0.51
RN7SKP54-201ENST00000410704 TOP1P11387 765 aaKnown RBP11.84□□□□□ -0.51
RN7SKP54-201ENST00000410704 EEF2P13639 858 aaKnown RBP11.84□□□□□ -0.51
RN7SKP54-201ENST00000410704 PTPRAP18433 802 aa11.84□□□□□ -0.51
RN7SKP54-201ENST00000410704 GUCY1A2P33402 732 aa11.84□□□□□ -0.51
RN7SKP54-201ENST00000410704 LIFRP42702 1097 aa11.84□□□□□ -0.51
RN7SKP54-201ENST00000410704 MCM2P49736 904 aa11.84□□□□□ -0.51
RN7SKP54-201ENST00000410704 AK2P54819 239 aa11.84□□□□□ -0.51
RN7SKP54-201ENST00000410704 JAG1P78504 1218 aa11.84□□□□□ -0.51
RN7SKP54-201ENST00000410704 COL9A3Q14050 684 aaPredicted RBP11.84□□□□□ -0.51
RN7SKP54-201ENST00000410704 SEC23AQ15436 765 aa11.84□□□□□ -0.51
RN7SKP54-201ENST00000410704 SHROOM1Q2M3G4 852 aaPredicted RBP11.84□□□□□ -0.51
RN7SKP54-201ENST00000410704 LDLRAD1Q5T700 205 aa11.84□□□□□ -0.51
RN7SKP54-201ENST00000410704 CST9Q5W186 159 aa11.84□□□□□ -0.51
RN7SKP54-201ENST00000410704 FBXL16Q8N461 479 aa11.84□□□□□ -0.51
RN7SKP54-201ENST00000410704 ANKS1AQ92625 1134 aa11.84□□□□□ -0.51
RN7SKP54-201ENST00000410704 BRF1Q92994 677 aa11.84□□□□□ -0.51
RN7SKP54-201ENST00000410704 SLC10A4Q96EP9 437 aa11.84□□□□□ -0.51
RN7SKP54-201ENST00000410704 FEZ1Q99689 392 aa11.84□□□□□ -0.51
RN7SKP54-201ENST00000410704 ELP3Q9H9T3 547 aa11.84□□□□□ -0.51
RN7SKP54-201ENST00000410704 LY9Q9HBG7 655 aa11.84□□□□□ -0.51
RN7SKP54-201ENST00000410704 NAP1L2Q9ULW6 460 aaPredicted RBP11.84□□□□□ -0.51
RN7SKP54-201ENST00000410704 SNCAIPQ9Y6H5 919 aa11.84□□□□□ -0.51
RN7SKP54-201ENST00000410704 DOCK1Q14185 1865 aa11.83□□□□□ -0.52
RN7SKP54-201ENST00000410704 NOVP48745 357 aa11.83□□□□□ -0.52
RN7SKP54-201ENST00000410704 CATIPQ7Z7H3 387 aa11.83□□□□□ -0.52
RN7SKP54-201ENST00000410704 ERO1BQ86YB8 467 aa11.83□□□□□ -0.52
RN7SKP54-201ENST00000410704 CLEC10AQ8IUN9 316 aa11.83□□□□□ -0.52
RN7SKP54-201ENST00000410704 GPHNQ9NQX3 736 aaPredicted RBP11.83□□□□□ -0.52
RN7SKP54-201ENST00000410704 SYNPO2Q9UMS6 1093 aa11.83□□□□□ -0.52
RN7SKP54-201ENST00000410704 SLC12A7Q9Y666 1083 aa11.83□□□□□ -0.52
RN7SKP54-201ENST00000410704 ZHX2Q9Y6X8 837 aa11.83□□□□□ -0.52
RN7SKP54-201ENST00000410704 TRPM7Q96QT4 1865 aa11.83□□□□□ -0.52
RN7SKP54-201ENST00000410704 ATAD5Q96QE3 1844 aa11.82□□□□□ -0.52
RN7SKP54-201ENST00000410704 KLF18A0A0U1RQI7 1052 aa11.82□□□□□ -0.52
RN7SKP54-201ENST00000410704 TMEM88BA6NKF7 163 aa11.82□□□□□ -0.52
RN7SKP54-201ENST00000410704 RAD21O60216 631 aa11.82□□□□□ -0.52
RN7SKP54-201ENST00000410704 CALM1P0DP23 149 aa11.82□□□□□ -0.52
RN7SKP54-201ENST00000410704 CALM2P0DP24 149 aa11.82□□□□□ -0.52
RN7SKP54-201ENST00000410704 CALM3P0DP25 149 aa11.82□□□□□ -0.52
RN7SKP54-201ENST00000410704 ANP32AP39687 249 aaKnown RBP11.82□□□□□ -0.52
RN7SKP54-201ENST00000410704 HUNKP57058 714 aa11.82□□□□□ -0.52
RN7SKP54-201ENST00000410704 PPATQ06203 517 aa11.82□□□□□ -0.52
RN7SKP54-201ENST00000410704 APOBRQ0VD83 1088 aa11.82□□□□□ -0.52
RN7SKP54-201ENST00000410704 TOB2Q14106 344 aaPredicted RBP11.82□□□□□ -0.52
RN7SKP54-201ENST00000410704 RCSD1Q6JBY9 416 aa11.82□□□□□ -0.52
RN7SKP54-201ENST00000410704 NOL8Q76FK4 1167 aaKnown RBP11.82□□□□□ -0.52
RN7SKP54-201ENST00000410704 SGMS1Q86VZ5 419 aa11.82□□□□□ -0.52
RN7SKP54-201ENST00000410704 LRRC47Q8N1G4 583 aaKnown RBP11.82□□□□□ -0.52
RN7SKP54-201ENST00000410704 ZNF280CQ8ND82 737 aa11.82□□□□□ -0.52
RN7SKP54-201ENST00000410704 PNMA1Q8ND90 353 aa11.82□□□□□ -0.52
RN7SKP54-201ENST00000410704 MKL1Q969V6 931 aa11.82□□□□□ -0.52
RN7SKP54-201ENST00000410704 CLMNQ96JQ2 1002 aa11.82□□□□□ -0.52
RN7SKP54-201ENST00000410704 TMEM47Q9BQJ4 181 aa11.82□□□□□ -0.52
RN7SKP54-201ENST00000410704 WDR18Q9BV38 432 aa11.82□□□□□ -0.52
RN7SKP54-201ENST00000410704 AGXT2Q9BYV1 514 aa11.82□□□□□ -0.52
RN7SKP54-201ENST00000410704 GOPCQ9HD26 462 aa11.82□□□□□ -0.52
RN7SKP54-201ENST00000410704 TSHZ2Q9NRE2 1034 aa11.82□□□□□ -0.52
RN7SKP54-201ENST00000410704 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.82□□□□□ -0.52
RN7SKP54-201ENST00000410704 ABT1Q9ULW3 272 aaKnown RBP11.82□□□□□ -0.52
RN7SKP54-201ENST00000410704 LIMCH1Q9UPQ0 1083 aa11.82□□□□□ -0.52
RN7SKP54-201ENST00000410704 SPDYE5A6NIY4 337 aa11.81□□□□□ -0.52
RN7SKP54-201ENST00000410704 USP17L10C9JJH3 530 aa11.81□□□□□ -0.52
RN7SKP54-201ENST00000410704 ZBTB43O43298 467 aa11.81□□□□□ -0.52
RN7SKP54-201ENST00000410704 DDAH1O94760 285 aa11.81□□□□□ -0.52
RN7SKP54-201ENST00000410704 USP14P54578 494 aa11.81□□□□□ -0.52
RN7SKP54-201ENST00000410704 SPP2Q13103 211 aa11.81□□□□□ -0.52
RN7SKP54-201ENST00000410704 PPIL2Q13356 520 aa11.81□□□□□ -0.52
RN7SKP54-201ENST00000410704 CCDC84Q86UT8 332 aaPredicted RBP11.81□□□□□ -0.52
RN7SKP54-201ENST00000410704 HSCBQ8IWL3 235 aa11.81□□□□□ -0.52
RN7SKP54-201ENST00000410704 ZNF654Q8IZM8 581 aa11.81□□□□□ -0.52
RN7SKP54-201ENST00000410704 OTUD5Q96G74 571 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms