RNA–Protein interactions for RNA: ENST00000409889.1

CCDC148-203, Transcript of coiled-coil domain containing 148, humanhuman

TSL 1 (best) BASIC

Gene CCDC148, Length 1,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148-203ENST00000409889 ERICH6Q7L0X2 663 aa13.1□□□□□ -0.31
CCDC148-203ENST00000409889 IL27Q8NEV9 243 aa13.1□□□□□ -0.31
CCDC148-203ENST00000409889 NPLOC4Q8TAT6 608 aa13.1□□□□□ -0.31
CCDC148-203ENST00000409889 ZNF384Q8TF68 577 aa13.1□□□□□ -0.31
CCDC148-203ENST00000409889 FERMT2Q96AC1 680 aa13.1□□□□□ -0.31
CCDC148-203ENST00000409889 TIFAQ96CG3 184 aa13.1□□□□□ -0.31
CCDC148-203ENST00000409889 CEP126Q9P2H0 1117 aa13.1□□□□□ -0.31
CCDC148-203ENST00000409889 RABGAP1Q9Y3P9 1069 aa13.1□□□□□ -0.31
CCDC148-203ENST00000409889 IVNS1ABPQ9Y6Y0 642 aa13.1□□□□□ -0.31
CCDC148-203ENST00000409889 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.09□□□□□ -0.31
CCDC148-203ENST00000409889 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.09□□□□□ -0.31
CCDC148-203ENST00000409889 MAP4K4O95819 1239 aaPredicted RBP13.09□□□□□ -0.31
CCDC148-203ENST00000409889 ADCYAP1R1P41586 468 aa13.09□□□□□ -0.31
CCDC148-203ENST00000409889 SHROOM1Q2M3G4 852 aaPredicted RBP13.09□□□□□ -0.31
CCDC148-203ENST00000409889 C1QTNF1Q9BXJ1 281 aa13.09□□□□□ -0.31
CCDC148-203ENST00000409889 SYNGAP1Q96PV0 1343 aa13.09□□□□□ -0.31
CCDC148-203ENST00000409889 CIAO1O76071 339 aa13.08□□□□□ -0.32
CCDC148-203ENST00000409889 GDF11O95390 407 aa13.08□□□□□ -0.32
CCDC148-203ENST00000409889 CLTBP09497 229 aa13.08□□□□□ -0.32
CCDC148-203ENST00000409889 TLE2Q04725 743 aa13.08□□□□□ -0.32
CCDC148-203ENST00000409889 FPGSQ05932 587 aa13.08□□□□□ -0.32
CCDC148-203ENST00000409889 AKNAD1Q5T1N1 836 aa13.08□□□□□ -0.32
CCDC148-203ENST00000409889 WDR63Q8IWG1 891 aa13.08□□□□□ -0.32
CCDC148-203ENST00000409889 TEX11Q8IYF3 940 aa13.08□□□□□ -0.32
CCDC148-203ENST00000409889 USP44Q9H0E7 712 aa13.08□□□□□ -0.32
CCDC148-203ENST00000409889 DNAJC18Q9H819 358 aa13.08□□□□□ -0.32
CCDC148-203ENST00000409889 EMILIN3Q9NT22 766 aa13.08□□□□□ -0.32
CCDC148-203ENST00000409889 PI4KBQ9UBF8 816 aa13.08□□□□□ -0.32
CCDC148-203ENST00000409889 FBXO3Q9UK99 471 aa13.08□□□□□ -0.32
CCDC148-203ENST00000409889 SALL2Q9Y467 1007 aaPredicted RBP13.08□□□□□ -0.32
CCDC148-203ENST00000409889 TACC3Q9Y6A5 838 aa13.08□□□□□ -0.32
CCDC148-203ENST00000409889 GBF1Q92538 1859 aa13.08□□□□□ -0.32
CCDC148-203ENST00000409889 SEPT4O43236 478 aa13.07□□□□□ -0.32
CCDC148-203ENST00000409889 IGHA2P01877 340 aa13.07□□□□□ -0.32
CCDC148-203ENST00000409889 RAG1P15918 1043 aa13.07□□□□□ -0.32
CCDC148-203ENST00000409889 GSTO1P78417 241 aa13.07□□□□□ -0.32
CCDC148-203ENST00000409889 LRRC41Q15345 812 aa13.07□□□□□ -0.32
CCDC148-203ENST00000409889 USP17L2Q6R6M4 530 aa13.07□□□□□ -0.32
CCDC148-203ENST00000409889 PRDM12Q9H4Q4 367 aa13.07□□□□□ -0.32
CCDC148-203ENST00000409889 ZBTB21Q9ULJ3 1066 aa13.07□□□□□ -0.32
CCDC148-203ENST00000409889 HCN4Q9Y3Q4 1203 aa13.07□□□□□ -0.32
CCDC148-203ENST00000409889 PIEZO1Q92508 2521 aa13.06□□□□□ -0.32
CCDC148-203ENST00000409889 KIAA0355O15063 1070 aa13.06□□□□□ -0.32
CCDC148-203ENST00000409889 LDHCP07864 332 aa13.06□□□□□ -0.32
CCDC148-203ENST00000409889 IL15P40933 162 aaPredicted RBP13.06□□□□□ -0.32
CCDC148-203ENST00000409889 CCDC85BQ15834 202 aaPredicted RBP13.06□□□□□ -0.32
CCDC148-203ENST00000409889 ZYXQ15942 572 aaKnown RBP13.06□□□□□ -0.32
CCDC148-203ENST00000409889 FAM47AQ5JRC9 791 aa13.06□□□□□ -0.32
CCDC148-203ENST00000409889 OLFML2BQ68BL8 750 aa13.06□□□□□ -0.32
CCDC148-203ENST00000409889 NSUN4Q96CB9 384 aaKnown RBP13.06□□□□□ -0.32
CCDC148-203ENST00000409889 NECAB3Q96P71 396 aaPredicted RBP13.06□□□□□ -0.32
CCDC148-203ENST00000409889 TRIM34Q9BYJ4 488 aa13.06□□□□□ -0.32
CCDC148-203ENST00000409889 DHX36Q9H2U1 1008 aaKnown RBP13.06□□□□□ -0.32
CCDC148-203ENST00000409889 ARIH1Q9Y4X5 557 aaPredicted RBP13.06□□□□□ -0.32
CCDC148-203ENST00000409889 TRANK1O15050 2925 aa13.06□□□□□ -0.32
CCDC148-203ENST00000409889 SMCHD1A6NHR9 2005 aa13.05□□□□□ -0.32
CCDC148-203ENST00000409889 USP17L15C9J2P7 530 aa13.05□□□□□ -0.32
CCDC148-203ENST00000409889 USP17L13C9JLJ4 530 aa13.05□□□□□ -0.32
CCDC148-203ENST00000409889 USP17L11C9JVI0 530 aa13.05□□□□□ -0.32
CCDC148-203ENST00000409889 USP17L18D6R9N7 530 aa13.05□□□□□ -0.32
CCDC148-203ENST00000409889 USP17L22D6RA61 530 aa13.05□□□□□ -0.32
CCDC148-203ENST00000409889 USP17L17D6RBQ6 530 aa13.05□□□□□ -0.32
CCDC148-203ENST00000409889 USP17L19D6RCP7 530 aa13.05□□□□□ -0.32
CCDC148-203ENST00000409889 USP17L20D6RJB6 530 aa13.05□□□□□ -0.32
CCDC148-203ENST00000409889 PQBP1O60828 265 aaKnown RBP13.05□□□□□ -0.32
CCDC148-203ENST00000409889 USP17L24Q0WX57 530 aa13.05□□□□□ -0.32
CCDC148-203ENST00000409889 DPP9Q86TI2 863 aa13.05□□□□□ -0.32
CCDC148-203ENST00000409889 CRACR2BQ8N4Y2 399 aaPredicted RBP13.05□□□□□ -0.32
CCDC148-203ENST00000409889 SH3RF3Q8TEJ3 882 aaPredicted RBP13.05□□□□□ -0.32
CCDC148-203ENST00000409889 C12orf42Q96LP6 360 aa13.05□□□□□ -0.32
CCDC148-203ENST00000409889 FEZ1Q99689 392 aa13.05□□□□□ -0.32
CCDC148-203ENST00000409889 PBX4Q9BYU1 374 aa13.05□□□□□ -0.32
CCDC148-203ENST00000409889 GINM1Q9NU53 330 aa13.05□□□□□ -0.32
CCDC148-203ENST00000409889 BTBD7Q9P203 1132 aa13.05□□□□□ -0.32
CCDC148-203ENST00000409889 A0A0G2JMZ2 1700 aa13.05□□□□□ -0.32
CCDC148-203ENST00000409889 MYH1P12882 1939 aa13.04□□□□□ -0.32
CCDC148-203ENST00000409889 ADORA2AP29274 412 aa13.04□□□□□ -0.32
CCDC148-203ENST00000409889 PBX2P40425 430 aa13.04□□□□□ -0.32
CCDC148-203ENST00000409889 TIMM10P62072 90 aa13.04□□□□□ -0.32
CCDC148-203ENST00000409889 ADGRE1Q14246 886 aa13.04□□□□□ -0.32
CCDC148-203ENST00000409889 CCDC129Q6ZRS4 1044 aa13.04□□□□□ -0.32
CCDC148-203ENST00000409889 METTL16Q86W50 562 aaKnown RBP13.04□□□□□ -0.32
CCDC148-203ENST00000409889 TMEM39AQ9NV64 488 aa13.04□□□□□ -0.32
CCDC148-203ENST00000409889 RAI14Q9P0K7 980 aa13.04□□□□□ -0.32
CCDC148-203ENST00000409889 PHF24Q9UPV7 400 aa13.04□□□□□ -0.32
CCDC148-203ENST00000409889 VCAM1P19320 739 aa13.03□□□□□ -0.32
CCDC148-203ENST00000409889 IGFBP4P22692 258 aa13.03□□□□□ -0.32
CCDC148-203ENST00000409889 CCDC184Q52MB2 194 aa13.03□□□□□ -0.32
CCDC148-203ENST00000409889 PI16Q6UXB8 463 aa13.03□□□□□ -0.32
CCDC148-203ENST00000409889 LBX2Q6XYB7 198 aa13.03□□□□□ -0.32
CCDC148-203ENST00000409889 CATSPERGQ6ZRH7 1159 aa13.03□□□□□ -0.32
CCDC148-203ENST00000409889 TBC1D9Q6ZT07 1266 aa13.03□□□□□ -0.32
CCDC148-203ENST00000409889 XAGE2Q96GT9 111 aa13.03□□□□□ -0.32
CCDC148-203ENST00000409889 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.03□□□□□ -0.32
CCDC148-203ENST00000409889 NOL10Q9BSC4 688 aaKnown RBP13.03□□□□□ -0.32
CCDC148-203ENST00000409889 PA2G4Q9UQ80 394 aaKnown RBP13.03□□□□□ -0.32
CCDC148-203ENST00000409889 PTPRCP08575 1304 aa13.03□□□□□ -0.32
CCDC148-203ENST00000409889 FLT1P17948 1338 aa13.03□□□□□ -0.32
CCDC148-203ENST00000409889 ZNFX1Q9P2E3 1918 aaKnown RBP13.03□□□□□ -0.32
CCDC148-203ENST00000409889 MUC6Q6W4X9 2439 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms