RNA–Protein interactions for RNA: ENST00000409884.5

LRRTM4-204, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRRTM4, Length 2,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-204ENST00000409884 ARPP21Q9UBL0 812 aaPredicted RBP12.41□□□□□ -0.42
LRRTM4-204ENST00000409884 ZNF646O15015 1829 aaPredicted RBP12.41□□□□□ -0.42
LRRTM4-204ENST00000409884 USP17L3A6NCW0 530 aa12.41□□□□□ -0.42
LRRTM4-204ENST00000409884 USP17L4A6NCW7 530 aa12.41□□□□□ -0.42
LRRTM4-204ENST00000409884 F13A1P00488 732 aa12.41□□□□□ -0.42
LRRTM4-204ENST00000409884 POLR3DP05423 398 aaPredicted RBP12.41□□□□□ -0.42
LRRTM4-204ENST00000409884 RBM5P52756 815 aaKnown RBP eCLIP12.41□□□□□ -0.42
LRRTM4-204ENST00000409884 STRIP1Q5VSL9 837 aa12.41□□□□□ -0.42
LRRTM4-204ENST00000409884 CLEC17AQ6ZS10 378 aa12.41□□□□□ -0.42
LRRTM4-204ENST00000409884 USP17L1Q7RTZ2 530 aa12.41□□□□□ -0.42
LRRTM4-204ENST00000409884 ZFPM1Q8IX07 1006 aa12.41□□□□□ -0.42
LRRTM4-204ENST00000409884 LARGE2Q8N3Y3 721 aa12.41□□□□□ -0.42
LRRTM4-204ENST00000409884 PHKBQ93100 1093 aa12.41□□□□□ -0.42
LRRTM4-204ENST00000409884 TMEM87BQ96K49 555 aa12.41□□□□□ -0.42
LRRTM4-204ENST00000409884 CALR3Q96L12 384 aaKnown RBP12.41□□□□□ -0.42
LRRTM4-204ENST00000409884 UBAC1Q9BSL1 405 aa12.41□□□□□ -0.42
LRRTM4-204ENST00000409884 ZKSCAN5Q9Y2L8 839 aa12.41□□□□□ -0.42
LRRTM4-204ENST00000409884 LAMB1P07942 1786 aa12.4□□□□□ -0.42
LRRTM4-204ENST00000409884 DDX11L8A8MPP1 907 aa12.4□□□□□ -0.42
LRRTM4-204ENST00000409884 PRPF40AO75400 957 aaKnown RBP12.4□□□□□ -0.42
LRRTM4-204ENST00000409884 WDHD1O75717 1129 aaPredicted RBP12.4□□□□□ -0.42
LRRTM4-204ENST00000409884 U2AF2P26368 475 aaKnown RBP eCLIP12.4□□□□□ -0.42
LRRTM4-204ENST00000409884 CRKP46108 304 aa12.4□□□□□ -0.42
LRRTM4-204ENST00000409884 METAP2P50579 478 aaKnown RBP eCLIP12.4□□□□□ -0.42
LRRTM4-204ENST00000409884 HMGN5P82970 282 aaKnown RBP12.4□□□□□ -0.42
LRRTM4-204ENST00000409884 WTAPQ15007 396 aa12.4□□□□□ -0.42
LRRTM4-204ENST00000409884 SEC23AQ15436 765 aa12.4□□□□□ -0.42
LRRTM4-204ENST00000409884 SBK1Q52WX2 424 aa12.4□□□□□ -0.42
LRRTM4-204ENST00000409884 CDC42EP5Q6NZY7 148 aa12.4□□□□□ -0.42
LRRTM4-204ENST00000409884 ZNF513Q8N8E2 541 aaPredicted RBP12.4□□□□□ -0.42
LRRTM4-204ENST00000409884 USP40Q9NVE5 1235 aa12.4□□□□□ -0.42
LRRTM4-204ENST00000409884 NAV1Q8NEY1 1877 aa12.4□□□□□ -0.42
LRRTM4-204ENST00000409884 ZBTB43O43298 467 aa12.39□□□□□ -0.43
LRRTM4-204ENST00000409884 FGRP09769 529 aa12.39□□□□□ -0.43
LRRTM4-204ENST00000409884 NUP133Q8WUM0 1156 aa12.39□□□□□ -0.43
LRRTM4-204ENST00000409884 TEKT1Q969V4 418 aa12.39□□□□□ -0.43
LRRTM4-204ENST00000409884 ZSCAN10Q96SZ4 725 aaPredicted RBP12.39□□□□□ -0.43
LRRTM4-204ENST00000409884 BCS1LQ9Y276 419 aa12.39□□□□□ -0.43
LRRTM4-204ENST00000409884 CNPY2Q9Y2B0 182 aa12.39□□□□□ -0.43
LRRTM4-204ENST00000409884 SLC12A7Q9Y666 1083 aa12.39□□□□□ -0.43
LRRTM4-204ENST00000409884 CCDC69A6NI79 296 aa12.39□□□□□ -0.43
LRRTM4-204ENST00000409884 LIFRP42702 1097 aa12.39□□□□□ -0.43
LRRTM4-204ENST00000409884 TGFB2P61812 414 aa12.39□□□□□ -0.43
LRRTM4-204ENST00000409884 DNM1Q05193 864 aaKnown RBP12.39□□□□□ -0.43
LRRTM4-204ENST00000409884 TCP10Q12799 353 aa12.39□□□□□ -0.43
LRRTM4-204ENST00000409884 TERF2Q15554 542 aa12.39□□□□□ -0.43
LRRTM4-204ENST00000409884 DALRD3Q5D0E6 543 aaKnown RBP12.39□□□□□ -0.43
LRRTM4-204ENST00000409884 SGMS1Q86VZ5 419 aa12.39□□□□□ -0.43
LRRTM4-204ENST00000409884 RTKN2Q8IZC4 609 aa12.39□□□□□ -0.43
LRRTM4-204ENST00000409884 FAM184AQ8NB25 1140 aa12.39□□□□□ -0.43
LRRTM4-204ENST00000409884 TSC1Q92574 1164 aa12.39□□□□□ -0.43
LRRTM4-204ENST00000409884 LMBRD1Q9NUN5 540 aa12.39□□□□□ -0.43
LRRTM4-204ENST00000409884 BAZ2BQ9UIF8 2168 aaKnown RBP12.39□□□□□ -0.43
LRRTM4-204ENST00000409884 GOLGA8AA7E2F4 631 aa12.38□□□□□ -0.43
LRRTM4-204ENST00000409884 PSMD14O00487 310 aa12.38□□□□□ -0.43
LRRTM4-204ENST00000409884 CPLX1O14810 134 aa12.38□□□□□ -0.43
LRRTM4-204ENST00000409884 TFAP4Q01664 338 aa12.38□□□□□ -0.43
LRRTM4-204ENST00000409884 SLF2Q8IX21 1173 aa12.38□□□□□ -0.43
LRRTM4-204ENST00000409884 IL17RBQ9NRM6 502 aa12.38□□□□□ -0.43
LRRTM4-204ENST00000409884 MYH1P12882 1939 aa12.38□□□□□ -0.43
LRRTM4-204ENST00000409884 CCDC189A1A4V9 331 aa12.38□□□□□ -0.43
LRRTM4-204ENST00000409884 ERICH2A1L162 156 aa12.38□□□□□ -0.43
LRRTM4-204ENST00000409884 TSPY2A6NKD2 308 aa12.38□□□□□ -0.43
LRRTM4-204ENST00000409884 DNAJC21Q5F1R6 531 aaKnown RBP12.38□□□□□ -0.43
LRRTM4-204ENST00000409884 ZNF654Q8IZM8 581 aa12.38□□□□□ -0.43
LRRTM4-204ENST00000409884 MNS1Q8NEH6 495 aa12.38□□□□□ -0.43
LRRTM4-204ENST00000409884 LLPHQ9BRT6 129 aaKnown RBP12.38□□□□□ -0.43
LRRTM4-204ENST00000409884 SUGT1Q9Y2Z0 365 aa12.38□□□□□ -0.43
LRRTM4-204ENST00000409884 SHTN1A0MZ66 631 aa12.37□□□□□ -0.43
LRRTM4-204ENST00000409884 FAM196BA6NMK8 535 aa12.37□□□□□ -0.43
LRRTM4-204ENST00000409884 NFKBIEO00221 500 aa12.37□□□□□ -0.43
LRRTM4-204ENST00000409884 ORC4O43929 436 aa12.37□□□□□ -0.43
LRRTM4-204ENST00000409884 PDE4BQ07343 736 aa12.37□□□□□ -0.43
LRRTM4-204ENST00000409884 SART3Q15020 963 aaKnown RBP12.37□□□□□ -0.43
LRRTM4-204ENST00000409884 NTRK3Q16288 839 aa12.37□□□□□ -0.43
LRRTM4-204ENST00000409884 HHIPL2Q6UWX4 724 aa12.37□□□□□ -0.43
LRRTM4-204ENST00000409884 RASGRP2Q7LDG7 609 aa12.37□□□□□ -0.43
LRRTM4-204ENST00000409884 SUPT20HQ8NEM7 779 aa12.37□□□□□ -0.43
LRRTM4-204ENST00000409884 TRERF1Q96PN7 1200 aa12.37□□□□□ -0.43
LRRTM4-204ENST00000409884 RASSF4Q9H2L5 321 aa12.37□□□□□ -0.43
LRRTM4-204ENST00000409884 MKNK2Q9HBH9 465 aa12.37□□□□□ -0.43
LRRTM4-204ENST00000409884 MED4Q9NPJ6 270 aa12.37□□□□□ -0.43
LRRTM4-204ENST00000409884 ORC3Q9UBD5 711 aaPredicted RBP12.37□□□□□ -0.43
LRRTM4-204ENST00000409884 MTMR7Q9Y216 660 aa12.37□□□□□ -0.43
LRRTM4-204ENST00000409884 BRCA1P38398 1863 aaKnown RBP12.37□□□□□ -0.43
LRRTM4-204ENST00000409884 DDX60LQ5H9U9 1706 aaKnown RBP12.37□□□□□ -0.43
LRRTM4-204ENST00000409884 hCG_1642624A0A1W2PR95 340 aa12.37□□□□□ -0.43
LRRTM4-204ENST00000409884 FIBPO43427 364 aa12.37□□□□□ -0.43
LRRTM4-204ENST00000409884 GADD45BO75293 160 aaPredicted RBP12.37□□□□□ -0.43
LRRTM4-204ENST00000409884 PLCG2P16885 1265 aa12.37□□□□□ -0.43
LRRTM4-204ENST00000409884 RASA1P20936 1047 aa12.37□□□□□ -0.43
LRRTM4-204ENST00000409884 GUCY1A2P33402 732 aa12.37□□□□□ -0.43
LRRTM4-204ENST00000409884 CDK8P49336 464 aa12.37□□□□□ -0.43
LRRTM4-204ENST00000409884 PRELPP51888 382 aa12.37□□□□□ -0.43
LRRTM4-204ENST00000409884 PLCB2Q00722 1185 aa12.37□□□□□ -0.43
LRRTM4-204ENST00000409884 RASSF7Q02833 373 aa12.37□□□□□ -0.43
LRRTM4-204ENST00000409884 IFIT1BQ5T764 474 aaKnown RBP12.37□□□□□ -0.43
LRRTM4-204ENST00000409884 RCSD1Q6JBY9 416 aa12.37□□□□□ -0.43
LRRTM4-204ENST00000409884 CLEC10AQ8IUN9 316 aa12.37□□□□□ -0.43
LRRTM4-204ENST00000409884 PRMT6Q96LA8 375 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms