RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 WDR66Q8TBY9 1149 aa8.73□□□□□ -1.01
CXCR4-202ENST00000409817 IGDCC4Q8TDY8 1250 aa8.73□□□□□ -1.01
CXCR4-202ENST00000409817 LEO1Q8WVC0 666 aaPredicted RBP8.73□□□□□ -1.01
CXCR4-202ENST00000409817 TRAIPQ9BWF2 469 aa8.73□□□□□ -1.01
CXCR4-202ENST00000409817 ALG2Q9H553 416 aa8.73□□□□□ -1.01
CXCR4-202ENST00000409817 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.73□□□□□ -1.01
CXCR4-202ENST00000409817 NEDD4P46934 1319 aa8.73□□□□□ -1.01
CXCR4-202ENST00000409817 IRS2Q9Y4H2 1338 aa8.73□□□□□ -1.01
CXCR4-202ENST00000409817 KIAA1551Q9HCM1 1747 aa8.73□□□□□ -1.01
CXCR4-202ENST00000409817 CCDC196A0A1B0GTZ2 297 aa8.72□□□□□ -1.01
CXCR4-202ENST00000409817 ZBTB43O43298 467 aa8.72□□□□□ -1.01
CXCR4-202ENST00000409817 BBOX1O75936 387 aa8.72□□□□□ -1.01
CXCR4-202ENST00000409817 PPARAQ07869 468 aa8.72□□□□□ -1.01
CXCR4-202ENST00000409817 TMEM67Q5HYA8 995 aa8.72□□□□□ -1.01
CXCR4-202ENST00000409817 DESI1Q6ICB0 168 aa8.72□□□□□ -1.01
CXCR4-202ENST00000409817 SMIM5Q71RC9 77 aa8.72□□□□□ -1.01
CXCR4-202ENST00000409817 CYB5R4Q7L1T6 521 aa8.72□□□□□ -1.01
CXCR4-202ENST00000409817 FBXO18Q8NFZ0 1043 aa8.72□□□□□ -1.01
CXCR4-202ENST00000409817 RPGRQ92834 1020 aaKnown RBP8.72□□□□□ -1.01
CXCR4-202ENST00000409817 NSUN4Q96CB9 384 aaKnown RBP8.72□□□□□ -1.01
CXCR4-202ENST00000409817 RBM17Q96I25 401 aaKnown RBP8.72□□□□□ -1.01
CXCR4-202ENST00000409817 C8orf76Q96K31 380 aa8.72□□□□□ -1.01
CXCR4-202ENST00000409817 PPP1R9BQ96SB3 815 aa8.72□□□□□ -1.01
CXCR4-202ENST00000409817 PANK2Q9BZ23 570 aa8.72□□□□□ -1.01
CXCR4-202ENST00000409817 LY9Q9HBG7 655 aa8.72□□□□□ -1.01
CXCR4-202ENST00000409817 NCOA5Q9HCD5 579 aaKnown RBP8.72□□□□□ -1.01
CXCR4-202ENST00000409817 DDX19AQ9NUU7 478 aaKnown RBP8.72□□□□□ -1.01
CXCR4-202ENST00000409817 ORC3Q9UBD5 711 aaPredicted RBP8.72□□□□□ -1.01
CXCR4-202ENST00000409817 STK36Q9NRP7 1315 aa8.72□□□□□ -1.01
CXCR4-202ENST00000409817 CCDC88AQ3V6T2 1871 aa8.72□□□□□ -1.01
CXCR4-202ENST00000409817 MYH15Q9Y2K3 1946 aa8.72□□□□□ -1.01
CXCR4-202ENST00000409817 KLRG2A4D1S0 409 aaPredicted RBP8.72□□□□□ -1.01
CXCR4-202ENST00000409817 CCDC69A6NI79 296 aa8.72□□□□□ -1.01
CXCR4-202ENST00000409817 IFIT3O14879 490 aaKnown RBP8.72□□□□□ -1.01
CXCR4-202ENST00000409817 PLSCR1O15162 318 aa8.72□□□□□ -1.01
CXCR4-202ENST00000409817 SERPINB2P05120 415 aa8.72□□□□□ -1.01
CXCR4-202ENST00000409817 FGRP09769 529 aa8.72□□□□□ -1.01
CXCR4-202ENST00000409817 FDPSP14324 419 aaKnown RBP8.72□□□□□ -1.01
CXCR4-202ENST00000409817 ATP2B4P23634 1241 aa8.72□□□□□ -1.01
CXCR4-202ENST00000409817 HOXA10P31260 410 aaPredicted RBP8.72□□□□□ -1.01
CXCR4-202ENST00000409817 RBM6P78332 1123 aaKnown RBP8.72□□□□□ -1.01
CXCR4-202ENST00000409817 UVSSAQ2YD98 709 aa8.72□□□□□ -1.01
CXCR4-202ENST00000409817 NFXL1Q6ZNB6 911 aa8.72□□□□□ -1.01
CXCR4-202ENST00000409817 ZNF804AQ7Z570 1209 aa8.72□□□□□ -1.01
CXCR4-202ENST00000409817 MIGA1Q8NAN2 632 aa8.72□□□□□ -1.01
CXCR4-202ENST00000409817 FLAD1Q8NFF5 587 aa8.72□□□□□ -1.01
CXCR4-202ENST00000409817 WASF1Q92558 559 aa8.72□□□□□ -1.01
CXCR4-202ENST00000409817 ESR2Q92731 530 aa8.72□□□□□ -1.01
CXCR4-202ENST00000409817 CRAMP1Q96RY5 1269 aa8.72□□□□□ -1.01
CXCR4-202ENST00000409817 CRNKL1Q9BZJ0 848 aaKnown RBP8.72□□□□□ -1.01
CXCR4-202ENST00000409817 ATP8A2Q9NTI2 1148 aa8.72□□□□□ -1.01
CXCR4-202ENST00000409817 ZSWIM5Q9P217 1185 aa8.72□□□□□ -1.01
CXCR4-202ENST00000409817 ANKIB1Q9P2G1 1089 aa8.72□□□□□ -1.01
CXCR4-202ENST00000409817 RCOR1Q9UKL0 485 aa8.72□□□□□ -1.01
CXCR4-202ENST00000409817 IQSEC3Q9UPP2 1182 aaPredicted RBP8.72□□□□□ -1.01
CXCR4-202ENST00000409817 SLC12A7Q9Y666 1083 aa8.72□□□□□ -1.01
CXCR4-202ENST00000409817 BRWD3Q6RI45 1802 aa8.72□□□□□ -1.01
CXCR4-202ENST00000409817 PRKAB2O43741 272 aa8.71□□□□□ -1.01
CXCR4-202ENST00000409817 SLC3A2P08195 630 aaKnown RBP8.71□□□□□ -1.01
CXCR4-202ENST00000409817 APLP1P51693 650 aa8.71□□□□□ -1.01
CXCR4-202ENST00000409817 GSTO1P78417 241 aa8.71□□□□□ -1.01
CXCR4-202ENST00000409817 FAM43AQ8N2R8 423 aa8.71□□□□□ -1.01
CXCR4-202ENST00000409817 TDRD7Q8NHU6 1098 aaKnown RBP8.71□□□□□ -1.01
CXCR4-202ENST00000409817 RBSNQ9H1K0 784 aa8.71□□□□□ -1.01
CXCR4-202ENST00000409817 ARPP21Q9UBL0 812 aaPredicted RBP8.71□□□□□ -1.01
CXCR4-202ENST00000409817 GOLGA8AA7E2F4 631 aa8.7□□□□□ -1.02
CXCR4-202ENST00000409817 TRIM37O94972 964 aa8.7□□□□□ -1.02
CXCR4-202ENST00000409817 ADD1P35611 737 aaKnown RBP8.7□□□□□ -1.02
CXCR4-202ENST00000409817 MECOMQ03112 1051 aa8.7□□□□□ -1.02
CXCR4-202ENST00000409817 WTAPQ15007 396 aa8.7□□□□□ -1.02
CXCR4-202ENST00000409817 TXNRD1Q16881 649 aa8.7□□□□□ -1.02
CXCR4-202ENST00000409817 SBK1Q52WX2 424 aa8.7□□□□□ -1.02
CXCR4-202ENST00000409817 HS1BP3Q53T59 392 aa8.7□□□□□ -1.02
CXCR4-202ENST00000409817 LYPD8Q6UX82 237 aa8.7□□□□□ -1.02
CXCR4-202ENST00000409817 ADGRA1Q86SQ6 560 aa8.7□□□□□ -1.02
CXCR4-202ENST00000409817 TRIM44Q96DX7 344 aaPredicted RBP8.7□□□□□ -1.02
CXCR4-202ENST00000409817 UCN2Q96RP3 112 aa8.7□□□□□ -1.02
CXCR4-202ENST00000409817 UBAC1Q9BSL1 405 aa8.7□□□□□ -1.02
CXCR4-202ENST00000409817 ORC4O43929 436 aa8.7□□□□□ -1.02
CXCR4-202ENST00000409817 LDHCP07864 332 aa8.7□□□□□ -1.02
CXCR4-202ENST00000409817 IFNAR1P17181 557 aa8.7□□□□□ -1.02
CXCR4-202ENST00000409817 IARSP41252 1262 aaKnown RBP8.7□□□□□ -1.02
CXCR4-202ENST00000409817 FAM173BQ6P4H8 233 aa8.7□□□□□ -1.02
CXCR4-202ENST00000409817 BRICD5Q6PL45 260 aa8.7□□□□□ -1.02
CXCR4-202ENST00000409817 IQCA1Q86XH1 822 aa8.7□□□□□ -1.02
CXCR4-202ENST00000409817 DZIP1Q86YF9 867 aaKnown RBP8.7□□□□□ -1.02
CXCR4-202ENST00000409817 NLGN1Q8N2Q7 840 aa8.7□□□□□ -1.02
CXCR4-202ENST00000409817 THAP11Q96EK4 314 aa8.7□□□□□ -1.02
CXCR4-202ENST00000409817 FAM163AQ96GL9 167 aaPredicted RBP8.7□□□□□ -1.02
CXCR4-202ENST00000409817 NUP62CLQ9H1M0 184 aa8.7□□□□□ -1.02
CXCR4-202ENST00000409817 RTEL1Q9NZ71 1219 aa8.7□□□□□ -1.02
CXCR4-202ENST00000409817 TFCP2L1Q9NZI6 479 aa8.7□□□□□ -1.02
CXCR4-202ENST00000409817 TFIP11Q9UBB9 837 aaKnown RBP8.7□□□□□ -1.02
CXCR4-202ENST00000409817 SOWAHBA6NEL2 793 aa8.69□□□□□ -1.02
CXCR4-202ENST00000409817 WTIPA6NIX2 430 aaPredicted RBP8.69□□□□□ -1.02
CXCR4-202ENST00000409817 POLRMTO00411 1230 aaKnown RBP8.69□□□□□ -1.02
CXCR4-202ENST00000409817 CTAGE5O15320 804 aa8.69□□□□□ -1.02
CXCR4-202ENST00000409817 YEATS4O95619 227 aa8.69□□□□□ -1.02
CXCR4-202ENST00000409817 CAVIN2O95810 425 aa8.69□□□□□ -1.02
CXCR4-202ENST00000409817 BAG3O95817 575 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms