RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 ALYREFQ86V81 257 aaKnown RBP8.4□□□□□ -1.06
LSM5-203ENST00000409782 TMEM151AQ8N4L1 468 aa8.4□□□□□ -1.06
LSM5-203ENST00000409782 TRIM11Q96F44 468 aa8.4□□□□□ -1.06
LSM5-203ENST00000409782 LATS2Q9NRM7 1088 aa8.4□□□□□ -1.06
LSM5-203ENST00000409782 KANSL3Q9P2N6 904 aa8.4□□□□□ -1.06
LSM5-203ENST00000409782 PRKAG3Q9UGI9 489 aa8.4□□□□□ -1.06
LSM5-203ENST00000409782 MRPL42Q9Y6G3 142 aaKnown RBP8.4□□□□□ -1.06
LSM5-203ENST00000409782 TOPAZ1Q8N9V7 1692 aa8.4□□□□□ -1.07
LSM5-203ENST00000409782 SBNO1A3KN83 1393 aa8.39□□□□□ -1.07
LSM5-203ENST00000409782 SMNDC1O75940 238 aaKnown RBP eCLIP8.39□□□□□ -1.07
LSM5-203ENST00000409782 GDF11O95390 407 aa8.39□□□□□ -1.07
LSM5-203ENST00000409782 TNNI3KQ59H18 835 aa8.39□□□□□ -1.07
LSM5-203ENST00000409782 TRAPPC3LQ5T215 181 aa8.39□□□□□ -1.07
LSM5-203ENST00000409782 COL13A1Q5TAT6 717 aaPredicted RBP8.39□□□□□ -1.07
LSM5-203ENST00000409782 FBXL19Q6PCT2 694 aa8.39□□□□□ -1.07
LSM5-203ENST00000409782 ANKS3Q6ZW76 656 aa8.39□□□□□ -1.07
LSM5-203ENST00000409782 SLITRK4Q8IW52 837 aa8.39□□□□□ -1.07
LSM5-203ENST00000409782 KCNB2Q92953 911 aa8.39□□□□□ -1.07
LSM5-203ENST00000409782 TRIM56Q9BRZ2 755 aaKnown RBP8.39□□□□□ -1.07
LSM5-203ENST00000409782 BHLHE41Q9C0J9 482 aaPredicted RBP8.39□□□□□ -1.07
LSM5-203ENST00000409782 RGPD8O14715 1765 aaPredicted RBP8.39□□□□□ -1.07
LSM5-203ENST00000409782 CDK12Q9NYV4 1490 aaPredicted RBP8.38□□□□□ -1.07
LSM5-203ENST00000409782 ARHGEF10O15013 1369 aa8.38□□□□□ -1.07
LSM5-203ENST00000409782 GPRASP1Q5JY77 1395 aa8.38□□□□□ -1.07
LSM5-203ENST00000409782 SPATA31A3Q5VYP0 1347 aa8.38□□□□□ -1.07
LSM5-203ENST00000409782 QRICH2Q9H0J4 1663 aa8.38□□□□□ -1.07
LSM5-203ENST00000409782 U2SURPO15042 1029 aaKnown RBP8.38□□□□□ -1.07
LSM5-203ENST00000409782 NID1P14543 1247 aa8.38□□□□□ -1.07
LSM5-203ENST00000409782 PRRT3Q5FWE3 981 aa8.38□□□□□ -1.07
LSM5-203ENST00000409782 AGMOQ6ZNB7 445 aa8.38□□□□□ -1.07
LSM5-203ENST00000409782 TRIM55Q9BYV6 548 aa8.38□□□□□ -1.07
LSM5-203ENST00000409782 RALGAPBQ86X10 1494 aa8.38□□□□□ -1.07
LSM5-203ENST00000409782 ABCA3Q99758 1704 aa8.37□□□□□ -1.07
LSM5-203ENST00000409782 TRPM3Q9HCF6 1732 aaPredicted RBP8.37□□□□□ -1.07
LSM5-203ENST00000409782 MARF1Q9Y4F3 1742 aaKnown RBP8.37□□□□□ -1.07
LSM5-203ENST00000409782 ROCK2O75116 1388 aaKnown RBP8.37□□□□□ -1.07
LSM5-203ENST00000409782 AFF2P51816 1311 aa8.37□□□□□ -1.07
LSM5-203ENST00000409782 PRR36Q9H6K5 1346 aa8.37□□□□□ -1.07
LSM5-203ENST00000409782 CENPJQ9HC77 1338 aaPredicted RBP8.37□□□□□ -1.07
LSM5-203ENST00000409782 MINDY4BA8MYZ0 360 aa8.37□□□□□ -1.07
LSM5-203ENST00000409782 ETFBP38117 255 aa8.37□□□□□ -1.07
LSM5-203ENST00000409782 TRIM28Q13263 835 aaKnown RBP8.37□□□□□ -1.07
LSM5-203ENST00000409782 COL9A3Q14050 684 aaPredicted RBP8.37□□□□□ -1.07
LSM5-203ENST00000409782 RASA3Q14644 834 aa8.37□□□□□ -1.07
LSM5-203ENST00000409782 PLEKHG4Q58EX7 1191 aa8.37□□□□□ -1.07
LSM5-203ENST00000409782 GDF6Q6KF10 455 aaPredicted RBP8.37□□□□□ -1.07
LSM5-203ENST00000409782 WFDC8Q8IUA0 241 aa8.37□□□□□ -1.07
LSM5-203ENST00000409782 CACTIN-AS1Q8N1I8 211 aa8.37□□□□□ -1.07
LSM5-203ENST00000409782 CEP120Q8N960 986 aa8.37□□□□□ -1.07
LSM5-203ENST00000409782 ZCRB1Q8TBF4 217 aaKnown RBP8.37□□□□□ -1.07
LSM5-203ENST00000409782 SIN3AQ96ST3 1273 aa8.37□□□□□ -1.07
LSM5-203ENST00000409782 ZKSCAN3Q9BRR0 538 aa8.37□□□□□ -1.07
LSM5-203ENST00000409782 AKAP2Q9Y2D5 859 aa8.37□□□□□ -1.07
LSM5-203ENST00000409782 TONSLQ96HA7 1378 aa8.36□□□□□ -1.07
LSM5-203ENST00000409782 RAC1P63000 192 aa8.36□□□□□ -1.07
LSM5-203ENST00000409782 APOBRQ0VD83 1088 aa8.36□□□□□ -1.07
LSM5-203ENST00000409782 CAMK2GQ13555 558 aaPredicted RBP8.36□□□□□ -1.07
LSM5-203ENST00000409782 PTPROQ16827 1216 aa8.36□□□□□ -1.07
LSM5-203ENST00000409782 SNAP47Q5SQN1 464 aa8.36□□□□□ -1.07
LSM5-203ENST00000409782 RNF187Q5TA31 235 aaPredicted RBP8.36□□□□□ -1.07
LSM5-203ENST00000409782 CEP135Q66GS9 1140 aa8.36□□□□□ -1.07
LSM5-203ENST00000409782 MSL1Q68DK7 614 aa8.36□□□□□ -1.07
LSM5-203ENST00000409782 FAM196AQ6ZSG2 479 aa8.36□□□□□ -1.07
LSM5-203ENST00000409782 KRT28Q7Z3Y7 464 aa8.36□□□□□ -1.07
LSM5-203ENST00000409782 NECAB3Q96P71 396 aaPredicted RBP8.36□□□□□ -1.07
LSM5-203ENST00000409782 SRRTQ9BXP5 876 aaKnown RBP8.36□□□□□ -1.07
LSM5-203ENST00000409782 PBX4Q9BYU1 374 aa8.36□□□□□ -1.07
LSM5-203ENST00000409782 SNTG2Q9NY99 539 aa8.36□□□□□ -1.07
LSM5-203ENST00000409782 MSRB2Q9Y3D2 182 aa8.36□□□□□ -1.07
LSM5-203ENST00000409782 ALS2Q96Q42 1657 aa8.36□□□□□ -1.07
LSM5-203ENST00000409782 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.35□□□□□ -1.07
LSM5-203ENST00000409782 FAM177BA6PVY3 158 aa8.35□□□□□ -1.07
LSM5-203ENST00000409782 PF4P02776 101 aa8.35□□□□□ -1.07
LSM5-203ENST00000409782 SPATA31C1P0DKV0 1188 aa8.35□□□□□ -1.07
LSM5-203ENST00000409782 COL8A1P27658 744 aa8.35□□□□□ -1.07
LSM5-203ENST00000409782 GSK3AP49840 483 aa8.35□□□□□ -1.07
LSM5-203ENST00000409782 ATP11AP98196 1134 aa8.35□□□□□ -1.07
LSM5-203ENST00000409782 GRIK5Q16478 980 aa8.35□□□□□ -1.07
LSM5-203ENST00000409782 TRIM42Q8IWZ5 723 aa8.35□□□□□ -1.07
LSM5-203ENST00000409782 DMRTC2Q8IXT2 367 aaPredicted RBP8.35□□□□□ -1.07
LSM5-203ENST00000409782 OR6P1Q8NGX9 317 aa8.35□□□□□ -1.07
LSM5-203ENST00000409782 SHDQ96IW2 340 aa8.35□□□□□ -1.07
LSM5-203ENST00000409782 DCAF5Q96JK2 942 aa8.35□□□□□ -1.07
LSM5-203ENST00000409782 RNPC3Q96LT9 517 aaKnown RBP8.35□□□□□ -1.07
LSM5-203ENST00000409782 DEPDC7Q96QD5 511 aa8.35□□□□□ -1.07
LSM5-203ENST00000409782 SRPK1Q96SB4 655 aaKnown RBP8.35□□□□□ -1.07
LSM5-203ENST00000409782 OSMRQ99650 979 aa8.35□□□□□ -1.07
LSM5-203ENST00000409782 CCDC113Q9H0I3 377 aa8.35□□□□□ -1.07
LSM5-203ENST00000409782 RASSF4Q9H2L5 321 aa8.35□□□□□ -1.07
LSM5-203ENST00000409782 POLR3AO14802 1390 aaPredicted RBP8.35□□□□□ -1.07
LSM5-203ENST00000409782 ENC1O14682 589 aa8.34□□□□□ -1.07
LSM5-203ENST00000409782 CELA3AP09093 270 aa8.34□□□□□ -1.07
LSM5-203ENST00000409782 TPTE2Q6XPS3 522 aa8.34□□□□□ -1.07
LSM5-203ENST00000409782 IL22RA1Q8N6P7 574 aa8.34□□□□□ -1.07
LSM5-203ENST00000409782 TMEM102Q8N9M5 508 aaPredicted RBP8.34□□□□□ -1.07
LSM5-203ENST00000409782 NKD1Q969G9 470 aa8.34□□□□□ -1.07
LSM5-203ENST00000409782 GPATCH3Q96I76 525 aa8.34□□□□□ -1.07
LSM5-203ENST00000409782 DZANK1Q9NVP4 752 aa8.34□□□□□ -1.07
LSM5-203ENST00000409782 TRIM33Q9UPN9 1127 aa8.34□□□□□ -1.07
LSM5-203ENST00000409782 PRKAB1Q9Y478 270 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms