RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 SPC24Q8NBT2 197 aa8.22□□□□□ -1.09
SCN9A-202ENST00000409435 ANO3Q9BYT9 981 aa8.22□□□□□ -1.09
SCN9A-202ENST00000409435 POLIQ9UNA4 740 aa8.22□□□□□ -1.09
SCN9A-202ENST00000409435 LRRC7Q96NW7 1537 aa8.22□□□□□ -1.09
SCN9A-202ENST00000409435 TULP4Q9NRJ4 1543 aa8.22□□□□□ -1.09
SCN9A-202ENST00000409435 NOL3O60936 208 aaKnown RBP8.22□□□□□ -1.09
SCN9A-202ENST00000409435 CETN2P41208 172 aa8.22□□□□□ -1.09
SCN9A-202ENST00000409435 IL17REQ8NFR9 667 aa8.22□□□□□ -1.09
SCN9A-202ENST00000409435 CAPNS2Q96L46 248 aa8.22□□□□□ -1.09
SCN9A-202ENST00000409435 KINO60870 393 aaKnown RBP8.22□□□□□ -1.09
SCN9A-202ENST00000409435 CASTP20810 708 aaKnown RBP8.22□□□□□ -1.09
SCN9A-202ENST00000409435 EEPD1Q7L9B9 569 aa8.22□□□□□ -1.09
SCN9A-202ENST00000409435 RGS22Q8NE09 1264 aa8.22□□□□□ -1.09
SCN9A-202ENST00000409435 NDUFB9Q9Y6M9 179 aa8.22□□□□□ -1.09
SCN9A-202ENST00000409435 TET3O43151 1660 aa8.22□□□□□ -1.09
SCN9A-202ENST00000409435 ADCY9O60503 1353 aa8.22□□□□□ -1.09
SCN9A-202ENST00000409435 USP17L15C9J2P7 530 aa8.22□□□□□ -1.09
SCN9A-202ENST00000409435 USP17L13C9JLJ4 530 aa8.22□□□□□ -1.09
SCN9A-202ENST00000409435 USP17L11C9JVI0 530 aa8.22□□□□□ -1.09
SCN9A-202ENST00000409435 USP17L18D6R9N7 530 aa8.22□□□□□ -1.09
SCN9A-202ENST00000409435 USP17L22D6RA61 530 aa8.22□□□□□ -1.09
SCN9A-202ENST00000409435 USP17L17D6RBQ6 530 aa8.22□□□□□ -1.09
SCN9A-202ENST00000409435 USP17L19D6RCP7 530 aa8.22□□□□□ -1.09
SCN9A-202ENST00000409435 USP17L20D6RJB6 530 aa8.22□□□□□ -1.09
SCN9A-202ENST00000409435 EIF5P55010 431 aaKnown RBP8.22□□□□□ -1.09
SCN9A-202ENST00000409435 USP17L24Q0WX57 530 aa8.22□□□□□ -1.09
SCN9A-202ENST00000409435 SMIM5Q71RC9 77 aa8.22□□□□□ -1.09
SCN9A-202ENST00000409435 FERMT1Q9BQL6 677 aa8.22□□□□□ -1.09
SCN9A-202ENST00000409435 ALG1Q9BT22 464 aa8.22□□□□□ -1.09
SCN9A-202ENST00000409435 MFSD1Q9H3U5 465 aa8.22□□□□□ -1.09
SCN9A-202ENST00000409435 SSX2IPQ9Y2D8 614 aa8.22□□□□□ -1.09
SCN9A-202ENST00000409435 ZBTB12Q9Y330 459 aaPredicted RBP8.22□□□□□ -1.09
SCN9A-202ENST00000409435 IDEP14735 1019 aa8.21□□□□□ -1.09
SCN9A-202ENST00000409435 SPICE1Q8N0Z3 855 aa8.21□□□□□ -1.09
SCN9A-202ENST00000409435 RASSF4Q9H2L5 321 aa8.21□□□□□ -1.09
SCN9A-202ENST00000409435 FGFR1OPO95684 399 aaKnown RBP8.21□□□□□ -1.09
SCN9A-202ENST00000409435 MRPS9P82933 396 aaKnown RBP8.21□□□□□ -1.09
SCN9A-202ENST00000409435 STRIP1Q5VSL9 837 aa8.21□□□□□ -1.09
SCN9A-202ENST00000409435 C8orf76Q96K31 380 aa8.21□□□□□ -1.09
SCN9A-202ENST00000409435 ORC3Q9UBD5 711 aaPredicted RBP8.21□□□□□ -1.09
SCN9A-202ENST00000409435 FEZ2Q9UHY8 353 aaPredicted RBP8.21□□□□□ -1.09
SCN9A-202ENST00000409435 USP42Q9H9J4 1324 aaKnown RBP8.21□□□□□ -1.1
SCN9A-202ENST00000409435 HMGB1P1B2RPK0 211 aaPredicted RBP8.21□□□□□ -1.1
SCN9A-202ENST00000409435 UBA7P41226 1012 aa8.21□□□□□ -1.1
SCN9A-202ENST00000409435 LMAN1P49257 510 aa8.21□□□□□ -1.1
SCN9A-202ENST00000409435 ATP8B2P98198 1209 aa8.21□□□□□ -1.1
SCN9A-202ENST00000409435 SLFN5Q08AF3 891 aa8.21□□□□□ -1.1
SCN9A-202ENST00000409435 RASA3Q14644 834 aa8.21□□□□□ -1.1
SCN9A-202ENST00000409435 SLITRK6Q9H5Y7 841 aa8.21□□□□□ -1.1
SCN9A-202ENST00000409435 KCNG1Q9UIX4 513 aa8.21□□□□□ -1.1
SCN9A-202ENST00000409435 AKT3Q9Y243 479 aa8.21□□□□□ -1.1
SCN9A-202ENST00000409435 ALKQ9UM73 1620 aa8.21□□□□□ -1.1
SCN9A-202ENST00000409435 DENND3A2RUS2 1198 aa8.21□□□□□ -1.1
SCN9A-202ENST00000409435 KRT13P13646 458 aa8.21□□□□□ -1.1
SCN9A-202ENST00000409435 CCND2P30279 289 aa8.21□□□□□ -1.1
SCN9A-202ENST00000409435 ME1P48163 572 aa8.21□□□□□ -1.1
SCN9A-202ENST00000409435 SPP2Q13103 211 aa8.21□□□□□ -1.1
SCN9A-202ENST00000409435 ZBTB8OSQ8IWT0 167 aa8.21□□□□□ -1.1
SCN9A-202ENST00000409435 GLIS2Q9BZE0 524 aaPredicted RBP8.21□□□□□ -1.1
SCN9A-202ENST00000409435 TSKSQ9UJT2 592 aa8.21□□□□□ -1.1
SCN9A-202ENST00000409435 ATP10DQ9P241 1426 aa8.21□□□□□ -1.1
SCN9A-202ENST00000409435 CBFA2T2O43439 604 aa8.2□□□□□ -1.1
SCN9A-202ENST00000409435 RAG1P15918 1043 aa8.2□□□□□ -1.1
SCN9A-202ENST00000409435 ZBTB17Q13105 803 aa8.2□□□□□ -1.1
SCN9A-202ENST00000409435 PPFIBP1Q86W92 1011 aa8.2□□□□□ -1.1
SCN9A-202ENST00000409435 GPRC5AQ8NFJ5 357 aa8.2□□□□□ -1.1
SCN9A-202ENST00000409435 CPLX3Q8WVH0 158 aa8.2□□□□□ -1.1
SCN9A-202ENST00000409435 GLT1D1Q96MS3 346 aa8.2□□□□□ -1.1
SCN9A-202ENST00000409435 KANSL2Q9H9L4 492 aa8.2□□□□□ -1.1
SCN9A-202ENST00000409435 PREX1Q8TCU6 1659 aa8.2□□□□□ -1.1
SCN9A-202ENST00000409435 SBNO2Q9Y2G9 1366 aa8.2□□□□□ -1.1
SCN9A-202ENST00000409435 DIP2AQ14689 1571 aa8.2□□□□□ -1.1
SCN9A-202ENST00000409435 CCDC169A6NNP5 214 aa8.2□□□□□ -1.1
SCN9A-202ENST00000409435 BRPF1P55201 1214 aaPredicted RBP8.2□□□□□ -1.1
SCN9A-202ENST00000409435 KRT24Q2M2I5 525 aa8.2□□□□□ -1.1
SCN9A-202ENST00000409435 COMMD10Q9Y6G5 202 aa8.2□□□□□ -1.1
SCN9A-202ENST00000409435 MST1RQ04912 1400 aa8.2□□□□□ -1.1
SCN9A-202ENST00000409435 ASB14A6NK59 587 aa8.2□□□□□ -1.1
SCN9A-202ENST00000409435 CCDC192P0DO97 292 aa8.2□□□□□ -1.1
SCN9A-202ENST00000409435 CCDC6Q16204 474 aa8.2□□□□□ -1.1
SCN9A-202ENST00000409435 FAM160B2Q86V87 743 aa8.2□□□□□ -1.1
SCN9A-202ENST00000409435 JPH2Q9BR39 696 aaPredicted RBP8.2□□□□□ -1.1
SCN9A-202ENST00000409435 LZTS2Q9BRK4 669 aa8.2□□□□□ -1.1
SCN9A-202ENST00000409435 CARD14Q9BXL6 1004 aa8.2□□□□□ -1.1
SCN9A-202ENST00000409435 CDK12Q9NYV4 1490 aaPredicted RBP8.2□□□□□ -1.1
SCN9A-202ENST00000409435 GLTPD2A6NH11 291 aa8.2□□□□□ -1.1
SCN9A-202ENST00000409435 ABL1P00519 1130 aa8.2□□□□□ -1.1
SCN9A-202ENST00000409435 MYZAPP0CAP1 466 aa8.2□□□□□ -1.1
SCN9A-202ENST00000409435 ANAPC15P60006 121 aa8.2□□□□□ -1.1
SCN9A-202ENST00000409435 TFAP4Q01664 338 aa8.2□□□□□ -1.1
SCN9A-202ENST00000409435 URGCPQ8TCY9 931 aa8.2□□□□□ -1.1
SCN9A-202ENST00000409435 PCDHA1Q9Y5I3 950 aa8.2□□□□□ -1.1
SCN9A-202ENST00000409435 PPP2R3BQ9Y5P8 575 aa8.2□□□□□ -1.1
SCN9A-202ENST00000409435 TNNI3KQ59H18 835 aa8.2□□□□□ -1.1
SCN9A-202ENST00000409435 FBXO11Q86XK2 927 aa8.2□□□□□ -1.1
SCN9A-202ENST00000409435 KRT222Q8N1A0 295 aa8.2□□□□□ -1.1
SCN9A-202ENST00000409435 FBF1Q8TES7 1133 aa8.2□□□□□ -1.1
SCN9A-202ENST00000409435 FPGT-TNNI3KV9GXZ4 949 aa8.2□□□□□ -1.1
SCN9A-202ENST00000409435 ZMYM4Q5VZL5 1548 aa8.2□□□□□ -1.1
SCN9A-202ENST00000409435 CCDC171Q6TFL3 1326 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms