RNA–Protein interactions for RNA: ENST00000409006.3

KDELR3-202, Transcript of KDEL endoplasmic reticulum protein retention receptor 3, humanhuman

TSL 1 (best) BASIC

Gene KDELR3, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3-202ENST00000409006 DYNLL2Q96FJ2 89 aa27.17■■□□□ 1.94
KDELR3-202ENST00000409006 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.17■■□□□ 1.94
KDELR3-202ENST00000409006 CABP5Q9NP86 173 aa27.17■■□□□ 1.94
KDELR3-202ENST00000409006 PCDHB15Q9Y5E8 787 aa27.17■■□□□ 1.94
KDELR3-202ENST00000409006 UBE3CQ15386 1083 aa27.16■■□□□ 1.94
KDELR3-202ENST00000409006 TSHZ3Q63HK5 1081 aa27.16■■□□□ 1.94
KDELR3-202ENST00000409006 GPRC5AQ8NFJ5 357 aa27.16■■□□□ 1.94
KDELR3-202ENST00000409006 KIAA1683Q9H0B3 1180 aa27.16■■□□□ 1.94
KDELR3-202ENST00000409006 ECHDC1Q9NTX5 307 aa27.16■■□□□ 1.94
KDELR3-202ENST00000409006 CYP2D7A0A087X1C5 515 aa27.15■■□□□ 1.94
KDELR3-202ENST00000409006 NKX2-3Q8TAU0 364 aa27.15■■□□□ 1.94
KDELR3-202ENST00000409006 U2AF1L4Q8WU68 220 aaKnown RBP27.15■■□□□ 1.94
KDELR3-202ENST00000409006 PUS7LQ9H0K6 701 aaKnown RBP27.15■■□□□ 1.94
KDELR3-202ENST00000409006 PAGR1Q9BTK6 254 aa27.14■■□□□ 1.94
KDELR3-202ENST00000409006 PORCNQ9H237 461 aa27.14■■□□□ 1.94
KDELR3-202ENST00000409006 ATP8A2Q9NTI2 1148 aa27.14■■□□□ 1.94
KDELR3-202ENST00000409006 RLFQ13129 1914 aa27.14■■□□□ 1.93
KDELR3-202ENST00000409006 A0A1W2PRG0 241 aa27.13■■□□□ 1.93
KDELR3-202ENST00000409006 MPHOSPH10O00566 681 aaKnown RBP27.13■■□□□ 1.93
KDELR3-202ENST00000409006 VCAM1P19320 739 aa27.13■■□□□ 1.93
KDELR3-202ENST00000409006 ERVK-9P63128 1117 aa27.13■■□□□ 1.93
KDELR3-202ENST00000409006 ERVK-24P63145 666 aa27.13■■□□□ 1.93
KDELR3-202ENST00000409006 TRIM32Q13049 653 aa27.13■■□□□ 1.93
KDELR3-202ENST00000409006 CATSPERGQ6ZRH7 1159 aa27.13■■□□□ 1.93
KDELR3-202ENST00000409006 UBE2Q1Q7Z7E8 422 aa27.13■■□□□ 1.93
KDELR3-202ENST00000409006 USP17L15C9J2P7 530 aa27.12■■□□□ 1.93
KDELR3-202ENST00000409006 USP17L13C9JLJ4 530 aa27.12■■□□□ 1.93
KDELR3-202ENST00000409006 USP17L11C9JVI0 530 aa27.12■■□□□ 1.93
KDELR3-202ENST00000409006 USP17L18D6R9N7 530 aa27.12■■□□□ 1.93
KDELR3-202ENST00000409006 USP17L22D6RA61 530 aa27.12■■□□□ 1.93
KDELR3-202ENST00000409006 USP17L17D6RBQ6 530 aa27.12■■□□□ 1.93
KDELR3-202ENST00000409006 USP17L19D6RCP7 530 aa27.12■■□□□ 1.93
KDELR3-202ENST00000409006 USP17L20D6RJB6 530 aa27.12■■□□□ 1.93
KDELR3-202ENST00000409006 CNMDO75829 334 aa27.12■■□□□ 1.93
KDELR3-202ENST00000409006 SGPL1O95470 568 aa27.12■■□□□ 1.93
KDELR3-202ENST00000409006 USP14P54578 494 aa27.12■■□□□ 1.93
KDELR3-202ENST00000409006 USP17L24Q0WX57 530 aa27.12■■□□□ 1.93
KDELR3-202ENST00000409006 USP17L12C9JPN9 530 aa27.11■■□□□ 1.93
KDELR3-202ENST00000409006 USP17L21D6R901 530 aa27.11■■□□□ 1.93
KDELR3-202ENST00000409006 CYP2B6P20813 491 aa27.11■■□□□ 1.93
KDELR3-202ENST00000409006 C12orf60Q5U649 245 aa27.11■■□□□ 1.93
KDELR3-202ENST00000409006 CLEC10AQ8IUN9 316 aa27.11■■□□□ 1.93
KDELR3-202ENST00000409006 DEFB118Q96PH6 123 aa27.11■■□□□ 1.93
KDELR3-202ENST00000409006 PAK6Q9NQU5 681 aaPredicted RBP27.11■■□□□ 1.93
KDELR3-202ENST00000409006 SLC4A4Q9Y6R1 1079 aa27.11■■□□□ 1.93
KDELR3-202ENST00000409006 AKR1B1P15121 316 aa27.1■■□□□ 1.93
KDELR3-202ENST00000409006 RRP1P56182 461 aaKnown RBP27.1■■□□□ 1.93
KDELR3-202ENST00000409006 ZSCAN25Q6NSZ9 544 aa27.1■■□□□ 1.93
KDELR3-202ENST00000409006 SWAP70Q9UH65 585 aa27.1■■□□□ 1.93
KDELR3-202ENST00000409006 PARP14Q460N5 1801 aa27.09■■□□□ 1.93
KDELR3-202ENST00000409006 HMGCRP04035 888 aa27.09■■□□□ 1.93
KDELR3-202ENST00000409006 KIAA1755Q5JYT7 1200 aa27.09■■□□□ 1.93
KDELR3-202ENST00000409006 SIAH1Q8IUQ4 282 aa27.09■■□□□ 1.93
KDELR3-202ENST00000409006 GTF3C2Q8WUA4 911 aaPredicted RBP27.09■■□□□ 1.93
KDELR3-202ENST00000409006 TRIB2Q92519 343 aa27.09■■□□□ 1.93
KDELR3-202ENST00000409006 RPAP3Q9H6T3 665 aaPredicted RBP27.09■■□□□ 1.93
KDELR3-202ENST00000409006 CDK8P49336 464 aa27.08■■□□□ 1.93
KDELR3-202ENST00000409006 KBTBD3Q8NAB2 608 aa27.08■■□□□ 1.93
KDELR3-202ENST00000409006 OTUD7AQ8TE49 926 aaPredicted RBP27.08■■□□□ 1.93
KDELR3-202ENST00000409006 MAPK4P31152 587 aa27.07■■□□□ 1.92
KDELR3-202ENST00000409006 CTR9Q6PD62 1173 aa27.07■■□□□ 1.92
KDELR3-202ENST00000409006 TMEM179Q6ZVK1 233 aa27.07■■□□□ 1.92
KDELR3-202ENST00000409006 GPR142Q7Z601 462 aa27.07■■□□□ 1.92
KDELR3-202ENST00000409006 USP6NLQ92738 828 aa27.07■■□□□ 1.92
KDELR3-202ENST00000409006 STRBPQ96SI9 672 aaKnown RBP27.07■■□□□ 1.92
KDELR3-202ENST00000409006 NUDT12Q9BQG2 462 aa27.07■■□□□ 1.92
KDELR3-202ENST00000409006 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.07■■□□□ 1.92
KDELR3-202ENST00000409006 BTBD7Q9P203 1132 aa27.07■■□□□ 1.92
KDELR3-202ENST00000409006 RABGAP1Q9Y3P9 1069 aa27.07■■□□□ 1.92
KDELR3-202ENST00000409006 ALPK3Q96L96 1907 aa27.07■■□□□ 1.92
KDELR3-202ENST00000409006 SPDYE16A6NNV3 312 aaPredicted RBP27.06■■□□□ 1.92
KDELR3-202ENST00000409006 FARP2O94887 1054 aaPredicted RBP27.06■■□□□ 1.92
KDELR3-202ENST00000409006 MORN1Q5T089 497 aa27.06■■□□□ 1.92
KDELR3-202ENST00000409006 OSBP2Q969R2 916 aa27.06■■□□□ 1.92
KDELR3-202ENST00000409006 CRISPLD2Q9H0B8 497 aa27.06■■□□□ 1.92
KDELR3-202ENST00000409006 CEP290O15078 2479 aa27.06■■□□□ 1.92
KDELR3-202ENST00000409006 A0A0G2JMZ2 1700 aa27.05■■□□□ 1.92
KDELR3-202ENST00000409006 H0YGN5 161 aa27.05■■□□□ 1.92
KDELR3-202ENST00000409006 TFRCP02786 760 aaKnown RBP27.05■■□□□ 1.92
KDELR3-202ENST00000409006 LBX2Q6XYB7 198 aa27.05■■□□□ 1.92
KDELR3-202ENST00000409006 C16orf86Q6ZW13 317 aa27.05■■□□□ 1.92
KDELR3-202ENST00000409006 GPATCH3Q96I76 525 aa27.05■■□□□ 1.92
KDELR3-202ENST00000409006 CRBNQ96SW2 442 aa27.05■■□□□ 1.92
KDELR3-202ENST00000409006 GREB1LQ9C091 1923 aaPredicted RBP27.05■■□□□ 1.92
KDELR3-202ENST00000409006 PLEKHH3Q7Z736 793 aa27.04■■□□□ 1.92
KDELR3-202ENST00000409006 CCAR1Q8IX12 1150 aaKnown RBP27.04■■□□□ 1.92
KDELR3-202ENST00000409006 SOCS4Q8WXH5 440 aa27.04■■□□□ 1.92
KDELR3-202ENST00000409006 DPF3Q92784 378 aa27.04■■□□□ 1.92
KDELR3-202ENST00000409006 COL11A1P12107 1806 aaPredicted RBP27.04■■□□□ 1.92
KDELR3-202ENST00000409006 GSG1L2A8MUP6 293 aa27.03■■□□□ 1.92
KDELR3-202ENST00000409006 RNF113AO15541 343 aaKnown RBP27.03■■□□□ 1.92
KDELR3-202ENST00000409006 XRCC5P13010 732 aaKnown RBP27.03■■□□□ 1.92
KDELR3-202ENST00000409006 CCL14Q16627 93 aa27.03■■□□□ 1.92
KDELR3-202ENST00000409006 RPTORQ8N122 1335 aa27.03■■□□□ 1.92
KDELR3-202ENST00000409006 PI4K2BQ8TCG2 481 aa27.03■■□□□ 1.92
KDELR3-202ENST00000409006 APPBP2Q92624 585 aa27.03■■□□□ 1.92
KDELR3-202ENST00000409006 GCC1Q96CN9 775 aa27.03■■□□□ 1.92
KDELR3-202ENST00000409006 ICA1Q05084 483 aa27.02■■□□□ 1.92
KDELR3-202ENST00000409006 HABP4Q5JVS0 413 aaKnown RBP27.02■■□□□ 1.92
KDELR3-202ENST00000409006 AMOTL1Q8IY63 956 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms