RNA–Protein interactions for RNA: ENST00000408684.1

SNORD88.1-201, humanhuman

BASIC

Gene SNORD88, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88.1-201ENST00000408684 CCDC129Q6ZRS4 1044 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 TRAPPC11Q7Z392 1133 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 TXNDC2Q86VQ3 553 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 SGMS1Q86VZ5 419 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 VPS37DQ86XT2 251 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 NOSTRINQ8IVI9 506 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 SLC35F6Q8N357 371 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 MREGQ8N565 214 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 TEX9Q8N6V9 391 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 GBP7Q8N8V2 638 aaPredicted RBP3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 ARMC2Q8NEN0 867 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 CFAP61Q8NHU2 1237 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 IP6K1Q92551 441 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 APPBP2Q92624 585 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 DDX12PQ92771 950 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 SECISBP2LQ93073 1101 aaKnown RBP3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 JAKMIP2Q96AA8 810 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 ZNF512BQ96KM6 892 aaPredicted RBP3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 NEUROD6Q96NK8 337 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 WDR24Q96S15 920 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 SH3GL2Q99962 352 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 RHOXF2Q9BQY4 288 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 SELENOOQ9BVL4 669 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 NACAP1Q9BZK3 213 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 TRIM6Q9C030 488 aaPredicted RBP3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 LRRC27Q9C0I9 530 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 NSRP1Q9H0G5 558 aaKnown RBP3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 CCDC8Q9H0W5 538 aaPredicted RBP3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 EPN3Q9H201 632 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 THAP9Q9H5L6 903 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 LZTFL1Q9NQ48 299 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 PLCB1Q9NQ66 1216 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 ST7Q9NRC1 585 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 KLC4Q9NSK0 619 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 SPATS2LQ9NUQ6 558 aaKnown RBP3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 CWC25Q9NXE8 425 aaPredicted RBP3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 AATFQ9NY61 560 aaKnown RBP eCLIP3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 MIS18AQ9NYP9 233 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 CEP126Q9P2H0 1117 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 ADD3Q9UEY8 706 aaKnown RBP3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 MAN1B1Q9UKM7 699 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 ODF2LQ9ULJ1 636 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 HPCAL4Q9UM19 191 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 SUFUQ9UMX1 484 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 HYOU1Q9Y4L1 999 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 SLC12A7Q9Y666 1083 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 CLIC4Q9Y696 253 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 CAPN7Q9Y6W3 813 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 SETD1AO15047 1707 aaKnown RBP3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 SLIT3O75094 1523 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 ABCB11O95342 1321 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 UBN2Q6ZU65 1347 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 CPDO75976 1380 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 RTL9Q8NET4 1388 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 HEG1Q9ULI3 1381 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 SIGLEC1Q9BZZ2 1709 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 TRIM75PA6NK02 468 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 NUTM2BA6NNL0 878 aaPredicted RBP3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 NEURL1BA8MQ27 555 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 NUTM2EB1AL46 878 aaPredicted RBP3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 GCOM1H8Y6P7 765 aaPredicted RBP3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 LAD1O00515 517 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 ABLIM1O14639 778 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 PSMA7O14818 248 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 LIN7AO14910 233 aaPredicted RBP3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 PPP1R37O75864 691 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 FLOT1O75955 427 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 FMNL1O95466 1100 aaPredicted RBP3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 SYF2O95926 243 aaKnown RBP3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 MMP1P03956 469 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 UQCRFS1P1P0C7P4 283 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 MYZAPP0CAP1 466 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 ATP1A3P13637 1013 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 FDPSP14324 419 aaKnown RBP3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 IDEP14735 1019 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 GPTP24298 496 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 CASP14P31944 242 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 GBP2P32456 591 aaPredicted RBP3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 KRT9P35527 623 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 LONP1P36776 959 aaKnown RBP3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 PBX1P40424 430 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 ZBED6P86452 979 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 MDM2Q00987 491 aaPredicted RBP3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 AMPD2Q01433 879 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 ACTN3Q08043 901 aaPredicted RBP3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 RBL2Q08999 1139 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 PAK1Q13153 545 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 ORC2Q13416 577 aaPredicted RBP3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 RIPK1Q13546 671 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 CUL1Q13616 776 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 KCNB1Q14721 858 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 KARSQ15046 597 aaKnown RBP3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 PTPAQ15257 358 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 RBBP5Q15291 538 aaKnown RBP3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 ALX1Q15699 326 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 LONRF3Q496Y0 759 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 SPECC1Q5M775 1068 aa3.17□□□□□ -1.9
SNORD88.1-201ENST00000408684 WLSQ5T9L3 541 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms