RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 STK32BQ9NY57 414 aa28.45■■■□□ 2.14
DNMT3A-206ENST00000406659 hCG_1642624A0A1W2PR95 340 aa28.44■■■□□ 2.14
DNMT3A-206ENST00000406659 SLC44A5Q8NCS7 719 aa28.44■■■□□ 2.14
DNMT3A-206ENST00000406659 SDF4Q9BRK5 362 aa28.44■■■□□ 2.14
DNMT3A-206ENST00000406659 VPS54Q9P1Q0 977 aa28.44■■■□□ 2.14
DNMT3A-206ENST00000406659 F8W031 263 aaPredicted RBP28.43■■■□□ 2.14
DNMT3A-206ENST00000406659 WDHD1O75717 1129 aaPredicted RBP28.43■■■□□ 2.14
DNMT3A-206ENST00000406659 RASA1P20936 1047 aa28.43■■■□□ 2.14
DNMT3A-206ENST00000406659 EZH2Q15910 746 aaKnown RBP28.43■■■□□ 2.14
DNMT3A-206ENST00000406659 RILPL1Q5EBL4 403 aa28.43■■■□□ 2.14
DNMT3A-206ENST00000406659 C16orf86Q6ZW13 317 aa28.43■■■□□ 2.14
DNMT3A-206ENST00000406659 CNTNAP5Q8WYK1 1306 aa28.43■■■□□ 2.14
DNMT3A-206ENST00000406659 CDK8P49336 464 aa28.42■■■□□ 2.14
DNMT3A-206ENST00000406659 POTEAQ6S8J7 498 aa28.42■■■□□ 2.14
DNMT3A-206ENST00000406659 PNMA1Q8ND90 353 aa28.42■■■□□ 2.14
DNMT3A-206ENST00000406659 ANO8Q9HCE9 1232 aaPredicted RBP28.42■■■□□ 2.14
DNMT3A-206ENST00000406659 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.42■■■□□ 2.14
DNMT3A-206ENST00000406659 RGS17Q9UGC6 210 aaPredicted RBP28.42■■■□□ 2.14
DNMT3A-206ENST00000406659 USP17L3A6NCW0 530 aa28.42■■■□□ 2.14
DNMT3A-206ENST00000406659 USP17L4A6NCW7 530 aa28.42■■■□□ 2.14
DNMT3A-206ENST00000406659 EN1Q05925 392 aaPredicted RBP28.42■■■□□ 2.14
DNMT3A-206ENST00000406659 NR5A1Q13285 461 aa28.42■■■□□ 2.14
DNMT3A-206ENST00000406659 USP17L1Q7RTZ2 530 aa28.42■■■□□ 2.14
DNMT3A-206ENST00000406659 CERS5Q8N5B7 392 aa28.42■■■□□ 2.14
DNMT3A-206ENST00000406659 OXER1Q8TDS5 423 aa28.42■■■□□ 2.14
DNMT3A-206ENST00000406659 PHF20Q9BVI0 1012 aa28.42■■■□□ 2.14
DNMT3A-206ENST00000406659 CCDC39Q9UFE4 941 aa28.42■■■□□ 2.14
DNMT3A-206ENST00000406659 TTF2Q9UNY4 1162 aaKnown RBP28.42■■■□□ 2.14
DNMT3A-206ENST00000406659 ADCY5O95622 1261 aa28.41■■■□□ 2.14
DNMT3A-206ENST00000406659 CAVIN2O95810 425 aa28.41■■■□□ 2.14
DNMT3A-206ENST00000406659 KRT2P35908 639 aa28.41■■■□□ 2.14
DNMT3A-206ENST00000406659 FBXO41Q8TF61 875 aa28.41■■■□□ 2.14
DNMT3A-206ENST00000406659 CAMKK2Q96RR4 588 aa28.41■■■□□ 2.14
DNMT3A-206ENST00000406659 CBX8Q9HC52 389 aa28.41■■■□□ 2.14
DNMT3A-206ENST00000406659 BRMS1Q9HCU9 246 aa28.41■■■□□ 2.14
DNMT3A-206ENST00000406659 CUTAO60888 179 aa28.4■■■□□ 2.14
DNMT3A-206ENST00000406659 PFKFB1P16118 471 aa28.4■■■□□ 2.14
DNMT3A-206ENST00000406659 TOB1P50616 345 aaPredicted RBP28.4■■■□□ 2.14
DNMT3A-206ENST00000406659 PLCB2Q00722 1185 aa28.39■■■□□ 2.14
DNMT3A-206ENST00000406659 STX1AQ16623 288 aa28.39■■■□□ 2.14
DNMT3A-206ENST00000406659 MYH1P12882 1939 aa28.39■■■□□ 2.14
DNMT3A-206ENST00000406659 ZNF202O95125 648 aa28.39■■■□□ 2.13
DNMT3A-206ENST00000406659 PTMAP06454 111 aaKnown RBP28.39■■■□□ 2.13
DNMT3A-206ENST00000406659 ZSCAN30Q86W11 494 aa28.39■■■□□ 2.13
DNMT3A-206ENST00000406659 SHISA4Q96DD7 197 aa28.39■■■□□ 2.13
DNMT3A-206ENST00000406659 DNAJC25Q9H1X3 360 aa28.39■■■□□ 2.13
DNMT3A-206ENST00000406659 ZNF165P49910 485 aa28.38■■■□□ 2.13
DNMT3A-206ENST00000406659 GNAQP50148 359 aa28.38■■■□□ 2.13
DNMT3A-206ENST00000406659 LUZP1Q86V48 1076 aa28.38■■■□□ 2.13
DNMT3A-206ENST00000406659 MXD3Q9BW11 206 aa28.38■■■□□ 2.13
DNMT3A-206ENST00000406659 CABP5Q9NP86 173 aa28.38■■■□□ 2.13
DNMT3A-206ENST00000406659 CEP131Q9UPN4 1083 aa28.38■■■□□ 2.13
DNMT3A-206ENST00000406659 DDX60LQ5H9U9 1706 aaKnown RBP28.38■■■□□ 2.13
DNMT3A-206ENST00000406659 SCG2P13521 617 aa28.37■■■□□ 2.13
DNMT3A-206ENST00000406659 GRM4Q14833 912 aa28.37■■■□□ 2.13
DNMT3A-206ENST00000406659 PODNQ7Z5L7 613 aa28.37■■■□□ 2.13
DNMT3A-206ENST00000406659 KRI1Q8N9T8 703 aaKnown RBP28.37■■■□□ 2.13
DNMT3A-206ENST00000406659 CNKSR1Q969H4 720 aa28.37■■■□□ 2.13
DNMT3A-206ENST00000406659 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP28.37■■■□□ 2.13
DNMT3A-206ENST00000406659 NEDD1Q8NHV4 660 aa28.37■■■□□ 2.13
DNMT3A-206ENST00000406659 STX8Q9UNK0 236 aa28.37■■■□□ 2.13
DNMT3A-206ENST00000406659 SYKP43405 635 aa28.36■■■□□ 2.13
DNMT3A-206ENST00000406659 SCNN1DP51172 638 aa28.36■■■□□ 2.13
DNMT3A-206ENST00000406659 PICALMQ13492 652 aa28.36■■■□□ 2.13
DNMT3A-206ENST00000406659 RESP18Q5W5W9 173 aa28.36■■■□□ 2.13
DNMT3A-206ENST00000406659 SHC4Q6S5L8 630 aa28.36■■■□□ 2.13
DNMT3A-206ENST00000406659 CLIC6Q96NY7 704 aa28.36■■■□□ 2.13
DNMT3A-206ENST00000406659 DBNDD1Q9H9R9 158 aa28.36■■■□□ 2.13
DNMT3A-206ENST00000406659 USP40Q9NVE5 1235 aa28.36■■■□□ 2.13
DNMT3A-206ENST00000406659 ANO10Q9NW15 660 aa28.36■■■□□ 2.13
DNMT3A-206ENST00000406659 ZNF219Q9P2Y4 722 aaPredicted RBP28.36■■■□□ 2.13
DNMT3A-206ENST00000406659 CHRNA5P30532 468 aa28.35■■■□□ 2.13
DNMT3A-206ENST00000406659 PFKFB3Q16875 520 aaPredicted RBP28.35■■■□□ 2.13
DNMT3A-206ENST00000406659 HHIPL2Q6UWX4 724 aa28.35■■■□□ 2.13
DNMT3A-206ENST00000406659 PIBF1Q8WXW3 757 aa28.35■■■□□ 2.13
DNMT3A-206ENST00000406659 TMEM47Q9BQJ4 181 aa28.35■■■□□ 2.13
DNMT3A-206ENST00000406659 QSER1Q2KHR3 1735 aa28.35■■■□□ 2.13
DNMT3A-206ENST00000406659 ATP2B1P20020 1258 aa28.34■■■□□ 2.13
DNMT3A-206ENST00000406659 TEKT1Q969V4 418 aa28.34■■■□□ 2.13
DNMT3A-206ENST00000406659 TIGD1Q96MW7 591 aa28.34■■■□□ 2.13
DNMT3A-206ENST00000406659 HPSEQ9Y251 543 aa28.34■■■□□ 2.13
DNMT3A-206ENST00000406659 PCDHB6Q9Y5E3 794 aa28.34■■■□□ 2.13
DNMT3A-206ENST00000406659 FOCADQ5VW36 1801 aa28.34■■■□□ 2.13
DNMT3A-206ENST00000406659 FAM237AA0A1B0GTK4 181 aa28.34■■■□□ 2.13
DNMT3A-206ENST00000406659 SNED1Q8TER0 1413 aa28.34■■■□□ 2.13
DNMT3A-206ENST00000406659 NLRP5P59047 1200 aa28.33■■■□□ 2.13
DNMT3A-206ENST00000406659 ZRSR1Q15695 479 aaKnown RBP28.33■■■□□ 2.13
DNMT3A-206ENST00000406659 STAG2Q8N3U4 1231 aa28.33■■■□□ 2.13
DNMT3A-206ENST00000406659 KIAA1468Q9P260 1216 aa28.33■■■□□ 2.13
DNMT3A-206ENST00000406659 MAD2L2Q9UI95 211 aa28.33■■■□□ 2.13
DNMT3A-206ENST00000406659 NOL7Q9UMY1 257 aaKnown RBP28.33■■■□□ 2.13
DNMT3A-206ENST00000406659 SLX4Q8IY92 1834 aa28.32■■■□□ 2.12
DNMT3A-206ENST00000406659 TRIM75PA6NK02 468 aa28.32■■■□□ 2.12
DNMT3A-206ENST00000406659 MSNP26038 577 aaKnown RBP28.32■■■□□ 2.12
DNMT3A-206ENST00000406659 CLCN1P35523 988 aa28.32■■■□□ 2.12
DNMT3A-206ENST00000406659 AP5Z1O43299 807 aa28.32■■■□□ 2.12
DNMT3A-206ENST00000406659 MTMR7Q9Y216 660 aa28.32■■■□□ 2.12
DNMT3A-206ENST00000406659 PTPREP23469 700 aa28.31■■■□□ 2.12
DNMT3A-206ENST00000406659 C11orf57Q6ZUT1 292 aaPredicted RBP28.31■■■□□ 2.12
DNMT3A-206ENST00000406659 ERCC4Q92889 916 aaPredicted RBP28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms