RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 MS4A1P11836 297 aa7.63□□□□□ -1.19
RPA3-204ENST00000406109 PLCG2P16885 1265 aa7.63□□□□□ -1.19
RPA3-204ENST00000406109 IL15P40933 162 aaPredicted RBP7.63□□□□□ -1.19
RPA3-204ENST00000406109 ERVK-9P63128 1117 aa7.63□□□□□ -1.19
RPA3-204ENST00000406109 ERVK-24P63145 666 aa7.63□□□□□ -1.19
RPA3-204ENST00000406109 PABPC4Q13310 644 aaKnown RBP eCLIP7.63□□□□□ -1.193e-8■■□□□ 12.6
RPA3-204ENST00000406109 MTMR2Q13614 643 aa7.63□□□□□ -1.19
RPA3-204ENST00000406109 PI16Q6UXB8 463 aa7.63□□□□□ -1.19
RPA3-204ENST00000406109 ITPRIPQ8IWB1 547 aa7.63□□□□□ -1.19
RPA3-204ENST00000406109 GPRC5AQ8NFJ5 357 aa7.63□□□□□ -1.19
RPA3-204ENST00000406109 PANK1Q8TE04 598 aa7.63□□□□□ -1.19
RPA3-204ENST00000406109 SOCS4Q8WXH5 440 aa7.63□□□□□ -1.19
RPA3-204ENST00000406109 XAGE2Q96GT9 111 aa7.63□□□□□ -1.19
RPA3-204ENST00000406109 NUDT12Q9BQG2 462 aa7.63□□□□□ -1.19
RPA3-204ENST00000406109 TBC1D2Q9BYX2 928 aa7.63□□□□□ -1.19
RPA3-204ENST00000406109 SEMA6BQ9H3T3 888 aa7.63□□□□□ -1.19
RPA3-204ENST00000406109 COPRSQ9NQ92 184 aa7.63□□□□□ -1.19
RPA3-204ENST00000406109 PRDM6Q9NQX0 595 aa7.63□□□□□ -1.19
RPA3-204ENST00000406109 FLRT1Q9NZU1 646 aa7.63□□□□□ -1.19
RPA3-204ENST00000406109 CDK5RAP2Q96SN8 1893 aa7.63□□□□□ -1.19
RPA3-204ENST00000406109 USP34Q70CQ2 3546 aa7.62□□□□□ -1.19
RPA3-204ENST00000406109 CNMDO75829 334 aa7.62□□□□□ -1.19
RPA3-204ENST00000406109 GNAI2P04899 355 aa7.62□□□□□ -1.19
RPA3-204ENST00000406109 RLBP1P12271 317 aa7.62□□□□□ -1.19
RPA3-204ENST00000406109 ZKSCAN1P17029 563 aaPredicted RBP7.62□□□□□ -1.19
RPA3-204ENST00000406109 MAPK4P31152 587 aa7.62□□□□□ -1.19
RPA3-204ENST00000406109 SPTY2D1Q68D10 685 aaPredicted RBP7.62□□□□□ -1.19
RPA3-204ENST00000406109 TBC1D9Q6ZT07 1266 aa7.62□□□□□ -1.19
RPA3-204ENST00000406109 ERICH6Q7L0X2 663 aa7.62□□□□□ -1.19
RPA3-204ENST00000406109 GPR142Q7Z601 462 aa7.62□□□□□ -1.19
RPA3-204ENST00000406109 SLF2Q8IX21 1173 aa7.62□□□□□ -1.19
RPA3-204ENST00000406109 TRMT44Q8IYL2 757 aaKnown RBP7.62□□□□□ -1.19
RPA3-204ENST00000406109 TRPV1Q8NER1 839 aa7.62□□□□□ -1.19
RPA3-204ENST00000406109 SENP6Q9GZR1 1112 aaPredicted RBP7.62□□□□□ -1.19
RPA3-204ENST00000406109 TTYH1Q9H313 450 aaPredicted RBP7.62□□□□□ -1.19
RPA3-204ENST00000406109 EMILIN3Q9NT22 766 aa7.62□□□□□ -1.19
RPA3-204ENST00000406109 HMG20BQ9P0W2 317 aa7.62□□□□□ -1.19
RPA3-204ENST00000406109 C5orf42Q9H799 3197 aa7.61□□□□□ -1.19
RPA3-204ENST00000406109 A0A1B0GUL7 405 aa7.61□□□□□ -1.19
RPA3-204ENST00000406109 MAP4K4O95819 1239 aaPredicted RBP7.61□□□□□ -1.19
RPA3-204ENST00000406109 RGS2P41220 211 aa7.61□□□□□ -1.19
RPA3-204ENST00000406109 IRX5P78411 483 aaPredicted RBP7.61□□□□□ -1.19
RPA3-204ENST00000406109 IRX3P78415 501 aaPredicted RBP7.61□□□□□ -1.19
RPA3-204ENST00000406109 SHHQ15465 462 aa7.61□□□□□ -1.19
RPA3-204ENST00000406109 C9orf50Q5SZB4 431 aa7.61□□□□□ -1.19
RPA3-204ENST00000406109 PLEKHH3Q7Z736 793 aa7.61□□□□□ -1.19
RPA3-204ENST00000406109 MAFAQ8NHW3 353 aaPredicted RBP7.61□□□□□ -1.19
RPA3-204ENST00000406109 SH3RF3Q8TEJ3 882 aaPredicted RBP7.61□□□□□ -1.19
RPA3-204ENST00000406109 APBA2Q99767 749 aa7.61□□□□□ -1.19
RPA3-204ENST00000406109 PI4KBQ9UBF8 816 aa7.61□□□□□ -1.19
RPA3-204ENST00000406109 HERC5Q9UII4 1024 aaKnown RBP7.61□□□□□ -1.19
RPA3-204ENST00000406109 MYO5AQ9Y4I1 1855 aaKnown RBP7.61□□□□□ -1.19
RPA3-204ENST00000406109 FOCADQ5VW36 1801 aa7.61□□□□□ -1.19
RPA3-204ENST00000406109 WDR87Q6ZQQ6 2873 aa7.6□□□□□ -1.19
RPA3-204ENST00000406109 C19orf81C9J6K1 198 aa7.6□□□□□ -1.19
RPA3-204ENST00000406109 USP17L10C9JJH3 530 aa7.6□□□□□ -1.19
RPA3-204ENST00000406109 ASNSP08243 561 aa7.6□□□□□ -1.19
RPA3-204ENST00000406109 ARID4AP29374 1257 aaPredicted RBP7.6□□□□□ -1.19
RPA3-204ENST00000406109 RTP1P59025 263 aa7.6□□□□□ -1.19
RPA3-204ENST00000406109 TFCP2Q12800 502 aa7.6□□□□□ -1.19
RPA3-204ENST00000406109 MAP2K5Q13163 448 aa7.6□□□□□ -1.19
RPA3-204ENST00000406109 PDE3AQ14432 1141 aa7.6□□□□□ -1.19
RPA3-204ENST00000406109 ZNF697Q5TEC3 545 aa7.6□□□□□ -1.19
RPA3-204ENST00000406109 ADGRA1Q86SQ6 560 aa7.6□□□□□ -1.19
RPA3-204ENST00000406109 TEX11Q8IYF3 940 aa7.6□□□□□ -1.19
RPA3-204ENST00000406109 SPATA5Q8NB90 893 aa7.6□□□□□ -1.19
RPA3-204ENST00000406109 LPAR1Q92633 364 aa7.6□□□□□ -1.19
RPA3-204ENST00000406109 C1orf115Q9H7X2 142 aa7.6□□□□□ -1.19
RPA3-204ENST00000406109 AS3MTQ9HBK9 375 aa7.6□□□□□ -1.19
RPA3-204ENST00000406109 TMOD4Q9NZQ9 345 aa7.6□□□□□ -1.19
RPA3-204ENST00000406109 DDX20Q9UHI6 824 aaKnown RBP7.6□□□□□ -1.19
RPA3-204ENST00000406109 COG6Q9Y2V7 657 aa7.6□□□□□ -1.19
RPA3-204ENST00000406109 NDUFB9Q9Y6M9 179 aa7.6□□□□□ -1.19
RPA3-204ENST00000406109 DMDP11532 3685 aa7.6□□□□□ -1.19
RPA3-204ENST00000406109 CFAP54Q96N23 3096 aa7.59□□□□□ -1.19
RPA3-204ENST00000406109 TRIM43BA6NCK2 446 aa7.59□□□□□ -1.19
RPA3-204ENST00000406109 DNM1LO00429 736 aa7.59□□□□□ -1.19
RPA3-204ENST00000406109 SRGAP3O43295 1099 aa7.59□□□□□ -1.19
RPA3-204ENST00000406109 GDF11O95390 407 aa7.59□□□□□ -1.19
RPA3-204ENST00000406109 HOXC6P09630 235 aa7.59□□□□□ -1.19
RPA3-204ENST00000406109 ITGB8P26012 769 aa7.59□□□□□ -1.19
RPA3-204ENST00000406109 MCAMP43121 646 aa7.59□□□□□ -1.19
RPA3-204ENST00000406109 PPP4CP60510 307 aa7.59□□□□□ -1.19
RPA3-204ENST00000406109 GRB14Q14449 540 aa7.59□□□□□ -1.19
RPA3-204ENST00000406109 SNX17Q15036 470 aa7.59□□□□□ -1.19
RPA3-204ENST00000406109 C20orf194Q5TEA3 1177 aa7.59□□□□□ -1.19
RPA3-204ENST00000406109 NPLOC4Q8TAT6 608 aa7.59□□□□□ -1.19
RPA3-204ENST00000406109 MYLIPQ8WY64 445 aa7.59□□□□□ -1.19
RPA3-204ENST00000406109 TRIM43Q96BQ3 446 aaPredicted RBP7.59□□□□□ -1.19
RPA3-204ENST00000406109 EDC3Q96F86 508 aaKnown RBP7.59□□□□□ -1.19
RPA3-204ENST00000406109 LBHD1Q9BQE6 289 aaPredicted RBP7.59□□□□□ -1.19
RPA3-204ENST00000406109 PAGR1Q9BTK6 254 aa7.59□□□□□ -1.19
RPA3-204ENST00000406109 PALD1Q9ULE6 856 aa7.59□□□□□ -1.19
RPA3-204ENST00000406109 ZBTB21Q9ULJ3 1066 aa7.59□□□□□ -1.19
RPA3-204ENST00000406109 PCDHB8Q9UN66 801 aa7.59□□□□□ -1.19
RPA3-204ENST00000406109 RABGAP1Q9Y3P9 1069 aa7.59□□□□□ -1.19
RPA3-204ENST00000406109 ZNFX1Q9P2E3 1918 aaKnown RBP7.58□□□□□ -1.2
RPA3-204ENST00000406109 FLT1P17948 1338 aa7.58□□□□□ -1.2
RPA3-204ENST00000406109 SLC15A5A6NIM6 579 aa7.58□□□□□ -1.2
RPA3-204ENST00000406109 LDHCP07864 332 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms