RNA–Protein interactions for RNA: ENST00000405655.7

PRAME-205, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-205ENST00000405655 GPKOWQ92917 476 aaPredicted RBP eCLIP16.28■□□□□ 0.2
PRAME-205ENST00000405655 MAP3K14Q99558 947 aa16.28■□□□□ 0.2
PRAME-205ENST00000405655 QSER1Q2KHR3 1735 aa16.27■□□□□ 0.2
PRAME-205ENST00000405655 ZBTB7AO95365 584 aa16.27■□□□□ 0.2
PRAME-205ENST00000405655 U2AF2P26368 475 aaKnown RBP eCLIP16.27■□□□□ 0.23e-26■□□□□ 8.5
PRAME-205ENST00000405655 MAP3K11Q16584 847 aa16.27■□□□□ 0.2
PRAME-205ENST00000405655 AXDND1Q5T1B0 1012 aaPredicted RBP16.27■□□□□ 0.2
PRAME-205ENST00000405655 APOBEC3HQ6NTF7 200 aaKnown RBP16.27■□□□□ 0.2
PRAME-205ENST00000405655 BRAPQ7Z569 592 aa16.27■□□□□ 0.2
PRAME-205ENST00000405655 PNMA1Q8ND90 353 aa16.27■□□□□ 0.2
PRAME-205ENST00000405655 ENGASEQ8NFI3 743 aa16.27■□□□□ 0.2
PRAME-205ENST00000405655 EYA3Q99504 573 aa16.27■□□□□ 0.2
PRAME-205ENST00000405655 PCDHB6Q9Y5E3 794 aa16.27■□□□□ 0.2
PRAME-205ENST00000405655 YDJCA8MPS7 323 aa16.27■□□□□ 0.19
PRAME-205ENST00000405655 PTPAQ15257 358 aa16.27■□□□□ 0.19
PRAME-205ENST00000405655 FAM163AQ96GL9 167 aaPredicted RBP16.27■□□□□ 0.19
PRAME-205ENST00000405655 TMEM47Q9BQJ4 181 aa16.27■□□□□ 0.19
PRAME-205ENST00000405655 CABP5Q9NP86 173 aa16.27■□□□□ 0.19
PRAME-205ENST00000405655 POLR3EQ9NVU0 708 aa16.27■□□□□ 0.19
PRAME-205ENST00000405655 USP25Q9UHP3 1055 aa16.27■□□□□ 0.19
PRAME-205ENST00000405655 RBM5P52756 815 aaKnown RBP eCLIP16.26■□□□□ 0.19
PRAME-205ENST00000405655 PLCB2Q00722 1185 aa16.26■□□□□ 0.19
PRAME-205ENST00000405655 TYRO3Q06418 890 aa16.26■□□□□ 0.19
PRAME-205ENST00000405655 STYK1Q6J9G0 422 aa16.26■□□□□ 0.19
PRAME-205ENST00000405655 NOSTRINQ8IVI9 506 aa16.26■□□□□ 0.19
PRAME-205ENST00000405655 TMX4Q9H1E5 349 aaPredicted RBP16.26■□□□□ 0.19
PRAME-205ENST00000405655 KAT14Q9H8E8 782 aa16.26■□□□□ 0.19
PRAME-205ENST00000405655 ZNF646O15015 1829 aaPredicted RBP16.26■□□□□ 0.19
PRAME-205ENST00000405655 ZBTB22O15209 634 aa16.26■□□□□ 0.19
PRAME-205ENST00000405655 DPEP1P16444 411 aa16.26■□□□□ 0.19
PRAME-205ENST00000405655 LUZP1Q86V48 1076 aa16.26■□□□□ 0.19
PRAME-205ENST00000405655 CEP95Q96GE4 821 aa16.26■□□□□ 0.19
PRAME-205ENST00000405655 MTA3Q9BTC8 594 aa16.26■□□□□ 0.19
PRAME-205ENST00000405655 ATF5Q9Y2D1 282 aaPredicted RBP16.26■□□□□ 0.19
PRAME-205ENST00000405655 ROBO3Q96MS0 1386 aa16.25■□□□□ 0.19
PRAME-205ENST00000405655 CCDC196A0A1B0GTZ2 297 aa16.25■□□□□ 0.19
PRAME-205ENST00000405655 AKR1B1P15121 316 aa16.25■□□□□ 0.19
PRAME-205ENST00000405655 CRKP46108 304 aa16.25■□□□□ 0.19
PRAME-205ENST00000405655 NPY5RQ15761 445 aa16.25■□□□□ 0.19
PRAME-205ENST00000405655 ANO6Q4KMQ2 910 aa16.25■□□□□ 0.19
PRAME-205ENST00000405655 C16orf86Q6ZW13 317 aa16.25■□□□□ 0.19
PRAME-205ENST00000405655 MAD2L2Q9UI95 211 aa16.25■□□□□ 0.19
PRAME-205ENST00000405655 MYH8P13535 1937 aa16.25■□□□□ 0.19
PRAME-205ENST00000405655 PRPF3O43395 683 aaKnown RBP16.24■□□□□ 0.19
PRAME-205ENST00000405655 CYTH3O43739 400 aa16.24■□□□□ 0.19
PRAME-205ENST00000405655 DDAH1O94760 285 aa16.24■□□□□ 0.19
PRAME-205ENST00000405655 PCP11498 1178 aaKnown RBP16.24■□□□□ 0.19
PRAME-205ENST00000405655 AKAP17AQ02040 695 aaKnown RBP16.24■□□□□ 0.19
PRAME-205ENST00000405655 SLC39A14Q15043 492 aa16.24■□□□□ 0.19
PRAME-205ENST00000405655 DACT2Q5SW24 774 aa16.24■□□□□ 0.19
PRAME-205ENST00000405655 TYW1BQ6NUM6 668 aa16.24■□□□□ 0.19
PRAME-205ENST00000405655 USP17L2Q6R6M4 530 aa16.24■□□□□ 0.19
PRAME-205ENST00000405655 SHC4Q6S5L8 630 aa16.24■□□□□ 0.19
PRAME-205ENST00000405655 FMR1NBQ8N0W7 255 aaPredicted RBP16.24■□□□□ 0.19
PRAME-205ENST00000405655 CTCFLQ8NI51 663 aaPredicted RBP16.24■□□□□ 0.19
PRAME-205ENST00000405655 RASGRP4Q8TDF6 673 aa16.24■□□□□ 0.19
PRAME-205ENST00000405655 RNF26Q9BY78 433 aaPredicted RBP16.24■□□□□ 0.19
PRAME-205ENST00000405655 DNAJC25Q9H1X3 360 aa16.24■□□□□ 0.19
PRAME-205ENST00000405655 COL4A5P29400 1685 aa16.24■□□□□ 0.19
PRAME-205ENST00000405655 KCNA3P22001 575 aa16.24■□□□□ 0.19
PRAME-205ENST00000405655 ADALQ6DHV7 355 aa16.24■□□□□ 0.19
PRAME-205ENST00000405655 ISM2Q6H9L7 571 aa16.24■□□□□ 0.19
PRAME-205ENST00000405655 AMOTL1Q8IY63 956 aa16.24■□□□□ 0.19
PRAME-205ENST00000405655 MRPS27Q92552 414 aaKnown RBP16.24■□□□□ 0.19
PRAME-205ENST00000405655 PPP1R9BQ96SB3 815 aa16.24■□□□□ 0.19
PRAME-205ENST00000405655 ZNF277Q9NRM2 450 aaPredicted RBP16.24■□□□□ 0.19
PRAME-205ENST00000405655 DDX19AQ9NUU7 478 aaKnown RBP16.24■□□□□ 0.19
PRAME-205ENST00000405655 SCAF8Q9UPN6 1271 aaKnown RBP16.24■□□□□ 0.19
PRAME-205ENST00000405655 CCDC73Q6ZRK6 1079 aa16.23■□□□□ 0.19
PRAME-205ENST00000405655 VAT1LQ9HCJ6 419 aa16.23■□□□□ 0.19
PRAME-205ENST00000405655 PFKFB1P16118 471 aa16.23■□□□□ 0.19
PRAME-205ENST00000405655 BAG6P46379 1132 aa16.23■□□□□ 0.19
PRAME-205ENST00000405655 FAM160A1Q05DH4 1040 aa16.23■□□□□ 0.19
PRAME-205ENST00000405655 SF3B2Q13435 895 aaKnown RBP16.23■□□□□ 0.19
PRAME-205ENST00000405655 C11orf57Q6ZUT1 292 aaPredicted RBP16.23■□□□□ 0.19
PRAME-205ENST00000405655 USP49Q70CQ1 688 aa16.23■□□□□ 0.19
PRAME-205ENST00000405655 LRRC47Q8N1G4 583 aaKnown RBP16.23■□□□□ 0.19
PRAME-205ENST00000405655 PHF20Q9BVI0 1012 aa16.23■□□□□ 0.19
PRAME-205ENST00000405655 DDTLA6NHG4 134 aaPredicted RBP16.22■□□□□ 0.19
PRAME-205ENST00000405655 PPIP5K2O43314 1243 aa16.22■□□□□ 0.19
PRAME-205ENST00000405655 RAD17O75943 681 aa16.22■□□□□ 0.19
PRAME-205ENST00000405655 LETM1O95202 739 aaPredicted RBP16.22■□□□□ 0.19
PRAME-205ENST00000405655 YEATS4O95619 227 aa16.22■□□□□ 0.19
PRAME-205ENST00000405655 CCDC173Q0VFZ6 552 aa16.22■□□□□ 0.19
PRAME-205ENST00000405655 WASF1Q92558 559 aa16.22■□□□□ 0.19
PRAME-205ENST00000405655 CNKSR1Q969H4 720 aa16.22■□□□□ 0.19
PRAME-205ENST00000405655 TEKT1Q969V4 418 aa16.22■□□□□ 0.19
PRAME-205ENST00000405655 PPP1R1BQ9UD71 204 aaPredicted RBP16.22■□□□□ 0.19
PRAME-205ENST00000405655 FRMPD2Q68DX3 1309 aaPredicted RBP16.22■□□□□ 0.19
PRAME-205ENST00000405655 USP17L5A8MUK1 530 aa16.21■□□□□ 0.19
PRAME-205ENST00000405655 BIN1O00499 593 aa16.21■□□□□ 0.19
PRAME-205ENST00000405655 CCDC192P0DO97 292 aa16.21■□□□□ 0.19
PRAME-205ENST00000405655 PLCG2P16885 1265 aa16.21■□□□□ 0.19
PRAME-205ENST00000405655 ATL3Q6DD88 541 aa16.21■□□□□ 0.19
PRAME-205ENST00000405655 RBM43Q6ZSC3 357 aaKnown RBP16.21■□□□□ 0.19
PRAME-205ENST00000405655 SH3BP5LQ7L8J4 393 aa16.21■□□□□ 0.19
PRAME-205ENST00000405655 PODNQ7Z5L7 613 aa16.21■□□□□ 0.19
PRAME-205ENST00000405655 SLF2Q8IX21 1173 aa16.21■□□□□ 0.19
PRAME-205ENST00000405655 KCNG4Q8TDN1 519 aa16.21■□□□□ 0.19
PRAME-205ENST00000405655 UBA5Q9GZZ9 404 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms