RNA–Protein interactions for RNA: ENST00000403683.1

HIST2H3A-201, Transcript of histone cluster 2 H3 family member a, humanhuman

APPRIS P1 BASIC

Gene HIST2H3A, Length 1,656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3A-201ENST00000403683 JAK2O60674 1132 aa29.44■■■□□ 2.3
HIST2H3A-201ENST00000403683 GDF11O95390 407 aa29.44■■■□□ 2.3
HIST2H3A-201ENST00000403683 ADD1P35611 737 aaKnown RBP29.44■■■□□ 2.3
HIST2H3A-201ENST00000403683 DDIT3P35638 169 aa29.44■■■□□ 2.3
HIST2H3A-201ENST00000403683 ATP2B2Q01814 1243 aa29.44■■■□□ 2.3
HIST2H3A-201ENST00000403683 FAM184AQ8NB25 1140 aa29.44■■■□□ 2.3
HIST2H3A-201ENST00000403683 PNMA1Q8ND90 353 aa29.44■■■□□ 2.3
HIST2H3A-201ENST00000403683 ANKS1AQ92625 1134 aa29.44■■■□□ 2.3
HIST2H3A-201ENST00000403683 MTMR7Q9Y216 660 aa29.44■■■□□ 2.3
HIST2H3A-201ENST00000403683 CCDC196A0A1B0GTZ2 297 aa29.43■■■□□ 2.3
HIST2H3A-201ENST00000403683 PPFIA3O75145 1194 aa29.43■■■□□ 2.3
HIST2H3A-201ENST00000403683 DDAH1O94760 285 aa29.43■■■□□ 2.3
HIST2H3A-201ENST00000403683 FANCBQ8NB91 859 aa29.43■■■□□ 2.3
HIST2H3A-201ENST00000403683 DCPSQ96C86 337 aaKnown RBP29.43■■■□□ 2.3
HIST2H3A-201ENST00000403683 TMEM47Q9BQJ4 181 aa29.43■■■□□ 2.3
HIST2H3A-201ENST00000403683 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.43■■■□□ 2.3
HIST2H3A-201ENST00000403683 MTMR4Q9NYA4 1195 aa29.43■■■□□ 2.3
HIST2H3A-201ENST00000403683 TBC1D12O60347 775 aa29.42■■■□□ 2.3
HIST2H3A-201ENST00000403683 CDKL5O76039 1030 aa29.42■■■□□ 2.3
HIST2H3A-201ENST00000403683 EPHX2P34913 555 aa29.42■■■□□ 2.3
HIST2H3A-201ENST00000403683 RCAN1P53805 252 aa29.42■■■□□ 2.3
HIST2H3A-201ENST00000403683 PPP4R3BQ5MIZ7 849 aa29.42■■■□□ 2.3
HIST2H3A-201ENST00000403683 NSUN7Q8NE18 718 aaKnown RBP29.42■■■□□ 2.3
HIST2H3A-201ENST00000403683 MYH8P13535 1937 aa29.41■■■□□ 2.3
HIST2H3A-201ENST00000403683 PTPDC1A2A3K4 754 aa29.41■■■□□ 2.3
HIST2H3A-201ENST00000403683 CDC27P30260 824 aa29.41■■■□□ 2.3
HIST2H3A-201ENST00000403683 NUCB2P80303 420 aa29.41■■■□□ 2.3
HIST2H3A-201ENST00000403683 HMGN5P82970 282 aaKnown RBP29.41■■■□□ 2.3
HIST2H3A-201ENST00000403683 CLIP2Q9UDT6 1046 aa29.41■■■□□ 2.3
HIST2H3A-201ENST00000403683 PGAP2Q9UHJ9 254 aa29.41■■■□□ 2.3
HIST2H3A-201ENST00000403683 PLIN4Q96Q06 1357 aa29.41■■■□□ 2.3
HIST2H3A-201ENST00000403683 IQCA1LA6NCM1 817 aa29.4■■■□□ 2.3
HIST2H3A-201ENST00000403683 CTDNEP1O95476 244 aa29.4■■■□□ 2.3
HIST2H3A-201ENST00000403683 TTLL1O95922 423 aa29.4■■■□□ 2.3
HIST2H3A-201ENST00000403683 TOP1P11387 765 aaKnown RBP29.4■■■□□ 2.3
HIST2H3A-201ENST00000403683 RAB3GAP1Q15042 981 aa29.4■■■□□ 2.3
HIST2H3A-201ENST00000403683 TMEM179Q6ZVK1 233 aa29.4■■■□□ 2.3
HIST2H3A-201ENST00000403683 CTCFLQ8NI51 663 aaPredicted RBP29.4■■■□□ 2.3
HIST2H3A-201ENST00000403683 TEPSINQ96N21 525 aa29.4■■■□□ 2.3
HIST2H3A-201ENST00000403683 KIF3AQ9Y496 699 aa29.4■■■□□ 2.3
HIST2H3A-201ENST00000403683 SIPA1L1O43166 1804 aa29.4■■■□□ 2.3
HIST2H3A-201ENST00000403683 PPP2R5BQ15173 497 aa29.4■■■□□ 2.3
HIST2H3A-201ENST00000403683 USP50Q70EL3 339 aaPredicted RBP29.4■■■□□ 2.3
HIST2H3A-201ENST00000403683 GH2P01242 217 aa29.39■■■□□ 2.3
HIST2H3A-201ENST00000403683 TROAPQ12815 778 aa29.39■■■□□ 2.3
HIST2H3A-201ENST00000403683 NBPF12Q5TAG4 269 aaPredicted RBP29.39■■■□□ 2.3
HIST2H3A-201ENST00000403683 PRAMEF18Q5VWM3 479 aa29.39■■■□□ 2.3
HIST2H3A-201ENST00000403683 CLEC10AQ8IUN9 316 aa29.39■■■□□ 2.3
HIST2H3A-201ENST00000403683 HOOK2Q96ED9 719 aa29.39■■■□□ 2.3
HIST2H3A-201ENST00000403683 KANSL2Q9H9L4 492 aa29.39■■■□□ 2.3
HIST2H3A-201ENST00000403683 IGKV6D-41A0A0C4DH26 115 aa29.38■■■□□ 2.29
HIST2H3A-201ENST00000403683 EAPPQ56P03 285 aaPredicted RBP29.38■■■□□ 2.29
HIST2H3A-201ENST00000403683 LARP1BQ659C4 914 aaKnown RBP29.38■■■□□ 2.29
HIST2H3A-201ENST00000403683 SULF1Q8IWU6 871 aa29.38■■■□□ 2.29
HIST2H3A-201ENST00000403683 SMARCC2Q8TAQ2 1214 aa29.38■■■□□ 2.29
HIST2H3A-201ENST00000403683 RBM28Q9NW13 759 aaKnown RBP29.38■■■□□ 2.29
HIST2H3A-201ENST00000403683 PITPNM2Q9BZ72 1349 aa29.38■■■□□ 2.29
HIST2H3A-201ENST00000403683 SEPT2Q15019 361 aa29.37■■■□□ 2.29
HIST2H3A-201ENST00000403683 SHROOM1Q2M3G4 852 aaPredicted RBP29.37■■■□□ 2.29
HIST2H3A-201ENST00000403683 CCDC82Q8N4S0 544 aa29.37■■■□□ 2.29
HIST2H3A-201ENST00000403683 FAM217BQ9NTX9 383 aaPredicted RBP29.37■■■□□ 2.29
HIST2H3A-201ENST00000403683 PPP2R3BQ9Y5P8 575 aa29.37■■■□□ 2.29
HIST2H3A-201ENST00000403683 PDCP20941 246 aa29.37■■■□□ 2.29
HIST2H3A-201ENST00000403683 KIF5BP33176 963 aa29.37■■■□□ 2.29
HIST2H3A-201ENST00000403683 DCAF15Q66K64 600 aa29.37■■■□□ 2.29
HIST2H3A-201ENST00000403683 RRP1BQ14684 758 aaKnown RBP29.36■■■□□ 2.29
HIST2H3A-201ENST00000403683 LRRC47Q8N1G4 583 aaKnown RBP29.36■■■□□ 2.29
HIST2H3A-201ENST00000403683 ORC3Q9UBD5 711 aaPredicted RBP29.36■■■□□ 2.29
HIST2H3A-201ENST00000403683 SYT1P21579 422 aa29.35■■■□□ 2.29
HIST2H3A-201ENST00000403683 ICA1Q05084 483 aa29.35■■■□□ 2.29
HIST2H3A-201ENST00000403683 PKP1Q13835 747 aa29.35■■■□□ 2.29
HIST2H3A-201ENST00000403683 FOXD4L5Q5VV16 416 aaPredicted RBP29.35■■■□□ 2.29
HIST2H3A-201ENST00000403683 FOXD4L4Q8WXT5 416 aaPredicted RBP29.35■■■□□ 2.29
HIST2H3A-201ENST00000403683 PHKBQ93100 1093 aa29.35■■■□□ 2.29
HIST2H3A-201ENST00000403683 NID2Q14112 1375 aa29.35■■■□□ 2.29
HIST2H3A-201ENST00000403683 RAD21O60216 631 aa29.34■■■□□ 2.29
HIST2H3A-201ENST00000403683 MAP3K10Q02779 954 aa29.34■■■□□ 2.29
HIST2H3A-201ENST00000403683 SSRP1Q08945 709 aaKnown RBP29.34■■■□□ 2.29
HIST2H3A-201ENST00000403683 CMTR1Q8N1G2 835 aaKnown RBP29.34■■■□□ 2.29
HIST2H3A-201ENST00000403683 SLC26A6Q9BXS9 759 aa29.34■■■□□ 2.29
HIST2H3A-201ENST00000403683 TAF1DQ9H5J8 278 aaPredicted RBP29.34■■■□□ 2.29
HIST2H3A-201ENST00000403683 EEF2P13639 858 aaKnown RBP29.34■■■□□ 2.29
HIST2H3A-201ENST00000403683 NOVP48745 357 aa29.34■■■□□ 2.29
HIST2H3A-201ENST00000403683 SUPT20HL1Q3ZLR7 823 aa29.34■■■□□ 2.29
HIST2H3A-201ENST00000403683 TRIM22Q8IYM9 498 aa29.34■■■□□ 2.29
HIST2H3A-201ENST00000403683 VPS37CA5D8V6 355 aaPredicted RBP29.33■■■□□ 2.29
HIST2H3A-201ENST00000403683 STX6O43752 255 aa29.33■■■□□ 2.29
HIST2H3A-201ENST00000403683 CAP2P40123 477 aa29.33■■■□□ 2.29
HIST2H3A-201ENST00000403683 FOSBP53539 338 aa29.33■■■□□ 2.29
HIST2H3A-201ENST00000403683 AKAP17AQ02040 695 aaKnown RBP29.33■■■□□ 2.29
HIST2H3A-201ENST00000403683 KRT26Q7Z3Y9 468 aa29.33■■■□□ 2.29
HIST2H3A-201ENST00000403683 IFNAR1P17181 557 aa29.32■■■□□ 2.28
HIST2H3A-201ENST00000403683 JAG1P78504 1218 aa29.32■■■□□ 2.28
HIST2H3A-201ENST00000403683 NTRK3Q16288 839 aa29.32■■■□□ 2.28
HIST2H3A-201ENST00000403683 PNMA8AQ86V59 439 aaPredicted RBP29.32■■■□□ 2.28
HIST2H3A-201ENST00000403683 ZC3H15Q8WU90 426 aaKnown RBP29.32■■■□□ 2.28
HIST2H3A-201ENST00000403683 MAP3K14Q99558 947 aa29.32■■■□□ 2.28
HIST2H3A-201ENST00000403683 ZNF341Q9BYN7 854 aa29.32■■■□□ 2.28
HIST2H3A-201ENST00000403683 NYAP2Q9P242 653 aa29.32■■■□□ 2.28
HIST2H3A-201ENST00000403683 ZBTB21Q9ULJ3 1066 aa29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms