RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 GJC2Q5T442 439 aaPredicted RBP14.67□□□□□ -0.06
SPTLC1P3-201ENST00000403408 ZNF697Q5TEC3 545 aa14.67□□□□□ -0.06
SPTLC1P3-201ENST00000403408 MAFAQ8NHW3 353 aaPredicted RBP14.67□□□□□ -0.06
SPTLC1P3-201ENST00000403408 ACER1Q8TDN7 264 aa14.67□□□□□ -0.06
SPTLC1P3-201ENST00000403408 LPAR1Q92633 364 aa14.67□□□□□ -0.06
SPTLC1P3-201ENST00000403408 C12orf42Q96LP6 360 aa14.67□□□□□ -0.06
SPTLC1P3-201ENST00000403408 DHX36Q9H2U1 1008 aaKnown RBP14.67□□□□□ -0.06
SPTLC1P3-201ENST00000403408 PRDM6Q9NQX0 595 aa14.67□□□□□ -0.06
SPTLC1P3-201ENST00000403408 TNNQ9UQP3 1299 aa14.67□□□□□ -0.06
SPTLC1P3-201ENST00000403408 RABGAP1Q9Y3P9 1069 aa14.67□□□□□ -0.06
SPTLC1P3-201ENST00000403408 PNMA6EA0A0J9YXQ4 647 aa14.66□□□□□ -0.06
SPTLC1P3-201ENST00000403408 TRIM43BA6NCK2 446 aa14.66□□□□□ -0.06
SPTLC1P3-201ENST00000403408 ANP32CO43423 234 aa14.66□□□□□ -0.06
SPTLC1P3-201ENST00000403408 CYP2E1P05181 493 aaPredicted RBP14.66□□□□□ -0.06
SPTLC1P3-201ENST00000403408 HOXC6P09630 235 aa14.66□□□□□ -0.06
SPTLC1P3-201ENST00000403408 CYBAP13498 195 aa14.66□□□□□ -0.06
SPTLC1P3-201ENST00000403408 GRB14Q14449 540 aa14.66□□□□□ -0.06
SPTLC1P3-201ENST00000403408 ANO1Q5XXA6 986 aa14.66□□□□□ -0.06
SPTLC1P3-201ENST00000403408 USP17L2Q6R6M4 530 aa14.66□□□□□ -0.06
SPTLC1P3-201ENST00000403408 CATSPERGQ6ZRH7 1159 aa14.66□□□□□ -0.06
SPTLC1P3-201ENST00000403408 FOXP4Q8IVH2 680 aaPredicted RBP14.66□□□□□ -0.06
SPTLC1P3-201ENST00000403408 BADQ92934 168 aa14.66□□□□□ -0.06
SPTLC1P3-201ENST00000403408 TRIM43Q96BQ3 446 aaPredicted RBP14.66□□□□□ -0.06
SPTLC1P3-201ENST00000403408 LBHD1Q9BQE6 289 aaPredicted RBP14.66□□□□□ -0.06
SPTLC1P3-201ENST00000403408 LRP2BPQ9P2M1 347 aa14.66□□□□□ -0.06
SPTLC1P3-201ENST00000403408 XIRP2A4UGR9 3374 aa14.66□□□□□ -0.06
SPTLC1P3-201ENST00000403408 MYH1P12882 1939 aa14.66□□□□□ -0.06
SPTLC1P3-201ENST00000403408 SLC15A5A6NIM6 579 aa14.65□□□□□ -0.06
SPTLC1P3-201ENST00000403408 DNM1LO00429 736 aa14.65□□□□□ -0.06
SPTLC1P3-201ENST00000403408 EPHB4P54760 987 aa14.65□□□□□ -0.06
SPTLC1P3-201ENST00000403408 EVX2Q03828 476 aa14.65□□□□□ -0.06
SPTLC1P3-201ENST00000403408 MFSD14CQ5VZR4 134 aa14.65□□□□□ -0.06
SPTLC1P3-201ENST00000403408 NAA16Q6N069 864 aaPredicted RBP14.65□□□□□ -0.06
SPTLC1P3-201ENST00000403408 SLC39A5Q6ZMH5 540 aa14.65□□□□□ -0.06
SPTLC1P3-201ENST00000403408 PIH1D3Q9NQM4 214 aaKnown RBP14.65□□□□□ -0.06
SPTLC1P3-201ENST00000403408 ATP11BQ9Y2G3 1177 aa14.65□□□□□ -0.06
SPTLC1P3-201ENST00000403408 SPDYE16A6NNV3 312 aaPredicted RBP14.64□□□□□ -0.07
SPTLC1P3-201ENST00000403408 USP17L15C9J2P7 530 aa14.64□□□□□ -0.07
SPTLC1P3-201ENST00000403408 USP17L13C9JLJ4 530 aa14.64□□□□□ -0.07
SPTLC1P3-201ENST00000403408 USP17L11C9JVI0 530 aa14.64□□□□□ -0.07
SPTLC1P3-201ENST00000403408 USP17L18D6R9N7 530 aa14.64□□□□□ -0.07
SPTLC1P3-201ENST00000403408 USP17L22D6RA61 530 aa14.64□□□□□ -0.07
SPTLC1P3-201ENST00000403408 USP17L17D6RBQ6 530 aa14.64□□□□□ -0.07
SPTLC1P3-201ENST00000403408 USP17L19D6RCP7 530 aa14.64□□□□□ -0.07
SPTLC1P3-201ENST00000403408 USP17L20D6RJB6 530 aa14.64□□□□□ -0.07
SPTLC1P3-201ENST00000403408 VCAM1P19320 739 aa14.64□□□□□ -0.07
SPTLC1P3-201ENST00000403408 CNGA1P29973 690 aa14.64□□□□□ -0.07
SPTLC1P3-201ENST00000403408 GUCY1A2P33402 732 aa14.64□□□□□ -0.07
SPTLC1P3-201ENST00000403408 USP17L24Q0WX57 530 aa14.64□□□□□ -0.07
SPTLC1P3-201ENST00000403408 SNX17Q15036 470 aa14.64□□□□□ -0.07
SPTLC1P3-201ENST00000403408 TRIM60Q495X7 471 aa14.64□□□□□ -0.07
SPTLC1P3-201ENST00000403408 TATDN1Q6P1N9 297 aa14.64□□□□□ -0.07
SPTLC1P3-201ENST00000403408 USP38Q8NB14 1042 aa14.64□□□□□ -0.07
SPTLC1P3-201ENST00000403408 GTF3C2Q8WUA4 911 aaPredicted RBP14.64□□□□□ -0.07
SPTLC1P3-201ENST00000403408 DBNDD2Q9BQY9 259 aa14.64□□□□□ -0.07
SPTLC1P3-201ENST00000403408 PDLIM7Q9NR12 457 aa14.64□□□□□ -0.07
SPTLC1P3-201ENST00000403408 GINM1Q9NU53 330 aa14.64□□□□□ -0.07
SPTLC1P3-201ENST00000403408 COBLO75128 1261 aa14.63□□□□□ -0.07
SPTLC1P3-201ENST00000403408 PRAMEF19Q5SWL8 479 aa14.63□□□□□ -0.07
SPTLC1P3-201ENST00000403408 WDR78Q5VTH9 848 aa14.63□□□□□ -0.07
SPTLC1P3-201ENST00000403408 LBX2Q6XYB7 198 aa14.63□□□□□ -0.07
SPTLC1P3-201ENST00000403408 CCAR1Q8IX12 1150 aaKnown RBP14.63□□□□□ -0.07
SPTLC1P3-201ENST00000403408 CRACR2BQ8N4Y2 399 aaPredicted RBP14.63□□□□□ -0.07
SPTLC1P3-201ENST00000403408 RAPGEFL1Q9UHV5 662 aa14.63□□□□□ -0.07
SPTLC1P3-201ENST00000403408 ZAP70P43403 619 aa14.62□□□□□ -0.07
SPTLC1P3-201ENST00000403408 ATP2B2Q01814 1243 aa14.62□□□□□ -0.07
SPTLC1P3-201ENST00000403408 KIAA1755Q5JYT7 1200 aa14.62□□□□□ -0.07
SPTLC1P3-201ENST00000403408 GORABQ5T7V8 394 aa14.62□□□□□ -0.07
SPTLC1P3-201ENST00000403408 API5Q9BZZ5 524 aaKnown RBP14.62□□□□□ -0.07
SPTLC1P3-201ENST00000403408 ZNF236Q9UL36 1845 aa14.62□□□□□ -0.07
SPTLC1P3-201ENST00000403408 ZNFX1Q9P2E3 1918 aaKnown RBP14.61□□□□□ -0.07
SPTLC1P3-201ENST00000403408 A0A1W2PRG0 241 aa14.61□□□□□ -0.07
SPTLC1P3-201ENST00000403408 BAG3O95817 575 aa14.61□□□□□ -0.07
SPTLC1P3-201ENST00000403408 UQCRFS1P1P0C7P4 283 aa14.61□□□□□ -0.07
SPTLC1P3-201ENST00000403408 SMAD3P84022 425 aaKnown RBP14.61□□□□□ -0.07
SPTLC1P3-201ENST00000403408 FERMT2Q96AC1 680 aa14.61□□□□□ -0.07
SPTLC1P3-201ENST00000403408 MOV10L1Q9BXT6 1211 aaKnown RBP14.61□□□□□ -0.07
SPTLC1P3-201ENST00000403408 KIAA1683Q9H0B3 1180 aa14.61□□□□□ -0.07
SPTLC1P3-201ENST00000403408 PRDM5Q9NQX1 630 aaPredicted RBP14.61□□□□□ -0.07
SPTLC1P3-201ENST00000403408 MSCO60682 206 aa14.6□□□□□ -0.07
SPTLC1P3-201ENST00000403408 PLCG2P16885 1265 aa14.6□□□□□ -0.07
SPTLC1P3-201ENST00000403408 ADORA2AP29274 412 aa14.6□□□□□ -0.07
SPTLC1P3-201ENST00000403408 SHMT1P34896 483 aa14.6□□□□□ -0.07
SPTLC1P3-201ENST00000403408 ADCYAP1R1P41586 468 aa14.6□□□□□ -0.07
SPTLC1P3-201ENST00000403408 RARSP54136 660 aaKnown RBP14.6□□□□□ -0.07
SPTLC1P3-201ENST00000403408 LRRC41Q15345 812 aa14.6□□□□□ -0.07
SPTLC1P3-201ENST00000403408 MIGA1Q8NAN2 632 aa14.6□□□□□ -0.07
SPTLC1P3-201ENST00000403408 RPAP3Q9H6T3 665 aaPredicted RBP14.6□□□□□ -0.07
SPTLC1P3-201ENST00000403408 TLR7Q9NYK1 1049 aaKnown RBP14.6□□□□□ -0.07
SPTLC1P3-201ENST00000403408 A0A0G2JMZ2 1700 aa14.6□□□□□ -0.07
SPTLC1P3-201ENST00000403408 FOSL2P15408 326 aa14.59□□□□□ -0.07
SPTLC1P3-201ENST00000403408 PLCD1P51178 756 aa14.59□□□□□ -0.07
SPTLC1P3-201ENST00000403408 CCNA1P78396 465 aa14.59□□□□□ -0.07
SPTLC1P3-201ENST00000403408 TLE2Q04725 743 aa14.59□□□□□ -0.07
SPTLC1P3-201ENST00000403408 GRIN2CQ14957 1233 aa14.59□□□□□ -0.07
SPTLC1P3-201ENST00000403408 RAB3GAP1Q15042 981 aa14.59□□□□□ -0.07
SPTLC1P3-201ENST00000403408 TNNI3KQ59H18 835 aa14.59□□□□□ -0.07
SPTLC1P3-201ENST00000403408 FAM47AQ5JRC9 791 aa14.59□□□□□ -0.07
SPTLC1P3-201ENST00000403408 OLFML2BQ68BL8 750 aa14.59□□□□□ -0.07
SPTLC1P3-201ENST00000403408 FEZ1Q99689 392 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms