RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 SPATA31A1Q5TZJ5 1347 aa16.08■□□□□ 0.16
ATG3-202ENST00000402314 EFCAB8A8MWE9 144 aa16.08■□□□□ 0.16
ATG3-202ENST00000402314 RHOXF2BP0C7M4 288 aa16.08■□□□□ 0.16
ATG3-202ENST00000402314 FAM182BQ5T319 152 aa16.08■□□□□ 0.16
ATG3-202ENST00000402314 RHOXF2Q9BQY4 288 aa16.08■□□□□ 0.16
ATG3-202ENST00000402314 KRT23Q9C075 422 aa16.08■□□□□ 0.16
ATG3-202ENST00000402314 TFCP2L1Q9NZI6 479 aa16.08■□□□□ 0.16
ATG3-202ENST00000402314 VPS54Q9P1Q0 977 aa16.08■□□□□ 0.16
ATG3-202ENST00000402314 PRR29P0C7W0 189 aa16.08■□□□□ 0.16
ATG3-202ENST00000402314 RESP18Q5W5W9 173 aa16.08■□□□□ 0.16
ATG3-202ENST00000402314 STAG1Q8WVM7 1258 aa16.08■□□□□ 0.16
ATG3-202ENST00000402314 UBAC1Q9BSL1 405 aa16.08■□□□□ 0.16
ATG3-202ENST00000402314 CABP5Q9NP86 173 aa16.08■□□□□ 0.16
ATG3-202ENST00000402314 TNKSO95271 1327 aa16.07■□□□□ 0.16
ATG3-202ENST00000402314 ERICH2A1L162 156 aa16.07■□□□□ 0.16
ATG3-202ENST00000402314 NMT2O60551 498 aa16.07■□□□□ 0.16
ATG3-202ENST00000402314 MMP1P03956 469 aa16.07■□□□□ 0.16
ATG3-202ENST00000402314 LONRF2Q1L5Z9 754 aa16.07■□□□□ 0.16
ATG3-202ENST00000402314 EARS2Q5JPH6 523 aaKnown RBP16.07■□□□□ 0.16
ATG3-202ENST00000402314 CRACR2BQ8N4Y2 399 aaPredicted RBP16.07■□□□□ 0.16
ATG3-202ENST00000402314 FANCBQ8NB91 859 aa16.07■□□□□ 0.16
ATG3-202ENST00000402314 MAGEB6P1A0A0J9YX57 407 aa16.07■□□□□ 0.16
ATG3-202ENST00000402314 CASP1P29466 404 aa16.07■□□□□ 0.16
ATG3-202ENST00000402314 PARP10Q53GL7 1025 aa16.07■□□□□ 0.16
ATG3-202ENST00000402314 FUT8Q9BYC5 575 aa16.07■□□□□ 0.16
ATG3-202ENST00000402314 CNNM2Q9H8M5 875 aa16.07■□□□□ 0.16
ATG3-202ENST00000402314 RRP15Q9Y3B9 282 aaKnown RBP16.07■□□□□ 0.16
ATG3-202ENST00000402314 WNT7AO00755 349 aa16.06■□□□□ 0.16
ATG3-202ENST00000402314 POLR2DO15514 142 aaKnown RBP16.06■□□□□ 0.16
ATG3-202ENST00000402314 PPP6R2O75170 966 aa16.06■□□□□ 0.16
ATG3-202ENST00000402314 PLEKHA8P1O95397 391 aa16.06■□□□□ 0.16
ATG3-202ENST00000402314 SART3Q15020 963 aaKnown RBP16.06■□□□□ 0.16
ATG3-202ENST00000402314 TRIM22Q8IYM9 498 aa16.06■□□□□ 0.16
ATG3-202ENST00000402314 HINFPQ9BQA5 517 aa16.06■□□□□ 0.16
ATG3-202ENST00000402314 RABEP2Q9H5N1 569 aa16.06■□□□□ 0.16
ATG3-202ENST00000402314 SRP68Q9UHB9 627 aaKnown RBP16.06■□□□□ 0.16
ATG3-202ENST00000402314 NHSL1Q5SYE7 1610 aa16.06■□□□□ 0.16
ATG3-202ENST00000402314 JMYQ8N9B5 988 aa16.06■□□□□ 0.16
ATG3-202ENST00000402314 LINC00116Q8NCU8 138 aa16.06■□□□□ 0.16
ATG3-202ENST00000402314 DOT1LQ8TEK3 1739 aa16.06■□□□□ 0.16
ATG3-202ENST00000402314 COL1A1P02452 1464 aaPredicted RBP16.06■□□□□ 0.16
ATG3-202ENST00000402314 ANKRD36CQ5JPF3 1778 aa16.06■□□□□ 0.16
ATG3-202ENST00000402314 SAFBQ15424 915 aaKnown RBP eCLIP16.05■□□□□ 0.16
ATG3-202ENST00000402314 CREBRFQ8IUR6 639 aa16.05■□□□□ 0.16
ATG3-202ENST00000402314 ANKRD18AQ8IVF6 992 aa16.05■□□□□ 0.16
ATG3-202ENST00000402314 KRI1Q8N9T8 703 aaKnown RBP16.05■□□□□ 0.16
ATG3-202ENST00000402314 GDAP1L1Q96MZ0 367 aa16.05■□□□□ 0.16
ATG3-202ENST00000402314 SERTAD1Q9UHV2 236 aa16.05■□□□□ 0.16
ATG3-202ENST00000402314 PHLPP2Q6ZVD8 1323 aa16.05■□□□□ 0.16
ATG3-202ENST00000402314 COBLO75128 1261 aa16.05■□□□□ 0.16
ATG3-202ENST00000402314 FAM98CQ17RN3 349 aaKnown RBP16.05■□□□□ 0.16
ATG3-202ENST00000402314 ENAHQ8N8S7 591 aaPredicted RBP16.05■□□□□ 0.16
ATG3-202ENST00000402314 TUBE1Q9UJT0 475 aa16.05■□□□□ 0.16
ATG3-202ENST00000402314 IRX3P78415 501 aaPredicted RBP16.05■□□□□ 0.16
ATG3-202ENST00000402314 CCDC102AQ96A19 550 aa16.05■□□□□ 0.16
ATG3-202ENST00000402314 FAM84BQ96KN1 310 aaPredicted RBP16.05■□□□□ 0.16
ATG3-202ENST00000402314 AK7Q96M32 723 aa16.05■□□□□ 0.16
ATG3-202ENST00000402314 BAG1Q99933 345 aaPredicted RBP16.05■□□□□ 0.16
ATG3-202ENST00000402314 MINPP1Q9UNW1 487 aa16.05■□□□□ 0.16
ATG3-202ENST00000402314 PNPLA7Q6ZV29 1317 aa16.04■□□□□ 0.16
ATG3-202ENST00000402314 CUTAO60888 179 aa16.04■□□□□ 0.16
ATG3-202ENST00000402314 VEGFAP15692 232 aaPredicted RBP16.04■□□□□ 0.16
ATG3-202ENST00000402314 FAM47AQ5JRC9 791 aa16.04■□□□□ 0.16
ATG3-202ENST00000402314 RIOK1Q9BRS2 568 aaKnown RBP16.04■□□□□ 0.16
ATG3-202ENST00000402314 FAN1Q9Y2M0 1017 aa16.04■□□□□ 0.16
ATG3-202ENST00000402314 V9GY48 417 aaPredicted RBP16.04■□□□□ 0.16
ATG3-202ENST00000402314 DDX60Q8IY21 1712 aaKnown RBP16.04■□□□□ 0.16
ATG3-202ENST00000402314 CYP2D6P10635 497 aa16.04■□□□□ 0.16
ATG3-202ENST00000402314 PIP4K2BP78356 416 aa16.04■□□□□ 0.16
ATG3-202ENST00000402314 TBC1D9BQ66K14 1250 aa16.04■□□□□ 0.16
ATG3-202ENST00000402314 CDC5LQ99459 802 aaKnown RBP16.04■□□□□ 0.16
ATG3-202ENST00000402314 FBXO2Q9UK22 296 aaPredicted RBP16.04■□□□□ 0.16
ATG3-202ENST00000402314 USP17L12C9JPN9 530 aa16.03■□□□□ 0.16
ATG3-202ENST00000402314 USP17L21D6R901 530 aa16.03■□□□□ 0.16
ATG3-202ENST00000402314 INTS13Q9NVM9 706 aa16.03■□□□□ 0.16
ATG3-202ENST00000402314 AATFQ9NY61 560 aaKnown RBP eCLIP16.03■□□□□ 0.16
ATG3-202ENST00000402314 ADAMTS3O15072 1205 aa16.03■□□□□ 0.16
ATG3-202ENST00000402314 GNAT2P19087 354 aa16.03■□□□□ 0.16
ATG3-202ENST00000402314 FMR1Q06787 632 aaKnown RBP eCLIP16.03■□□□□ 0.16
ATG3-202ENST00000402314 SEC23AQ15436 765 aa16.03■□□□□ 0.16
ATG3-202ENST00000402314 STAMQ92783 540 aa16.03■□□□□ 0.16
ATG3-202ENST00000402314 BPIFA3Q9BQP9 254 aa16.03■□□□□ 0.16
ATG3-202ENST00000402314 MRPL44Q9H9J2 332 aaKnown RBP16.03■□□□□ 0.16
ATG3-202ENST00000402314 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.03■□□□□ 0.16
ATG3-202ENST00000402314 SOWAHDA6NJG2 315 aa16.03■□□□□ 0.16
ATG3-202ENST00000402314 ZSCAN12O43309 604 aa16.03■□□□□ 0.16
ATG3-202ENST00000402314 TXNRD3Q86VQ6 643 aa16.03■□□□□ 0.16
ATG3-202ENST00000402314 CSRNP2Q9H175 543 aa16.03■□□□□ 0.16
ATG3-202ENST00000402314 DEXIO95424 95 aa16.02■□□□□ 0.16
ATG3-202ENST00000402314 PRDX5P30044 214 aa16.02■□□□□ 0.16
ATG3-202ENST00000402314 MYL5Q02045 173 aa16.02■□□□□ 0.16
ATG3-202ENST00000402314 SLC20A2Q08357 652 aa16.02■□□□□ 0.16
ATG3-202ENST00000402314 SRLQ86TD4 932 aa16.02■□□□□ 0.16
ATG3-202ENST00000402314 AMIGO3Q86WK7 504 aa16.02■□□□□ 0.16
ATG3-202ENST00000402314 GPR161Q8N6U8 529 aaKnown RBP16.02■□□□□ 0.16
ATG3-202ENST00000402314 EPSTI1Q96J88 318 aa16.02■□□□□ 0.16
ATG3-202ENST00000402314 DRC1Q96MC2 740 aa16.02■□□□□ 0.16
ATG3-202ENST00000402314 PNKPQ96T60 521 aa16.02■□□□□ 0.16
ATG3-202ENST00000402314 KCND1Q9NSA2 647 aa16.02■□□□□ 0.16
ATG3-202ENST00000402314 LRP5O75197 1615 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms