RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 STIM1Q13586 685 aa19.31■□□□□ 0.68
PTPRA-205ENST00000399903 TTLL11Q8NHH1 800 aa19.31■□□□□ 0.68
PTPRA-205ENST00000399903 NUP88Q99567 741 aaPredicted RBP19.31■□□□□ 0.68
PTPRA-205ENST00000399903 FAM169AQ9Y6X4 670 aa19.31■□□□□ 0.68
PTPRA-205ENST00000399903 POSTNQ15063 836 aa19.31■□□□□ 0.68
PTPRA-205ENST00000399903 RAB21Q9UL25 225 aa19.31■□□□□ 0.68
PTPRA-205ENST00000399903 PCCAP05165 728 aaPredicted RBP19.3■□□□□ 0.68
PTPRA-205ENST00000399903 DDB1Q16531 1140 aa19.3■□□□□ 0.68
PTPRA-205ENST00000399903 MSANTD4Q8NCY6 345 aa19.3■□□□□ 0.68
PTPRA-205ENST00000399903 STAMQ92783 540 aa19.3■□□□□ 0.68
PTPRA-205ENST00000399903 MED4Q9NPJ6 270 aa19.3■□□□□ 0.68
PTPRA-205ENST00000399903 JPH2Q9BR39 696 aaPredicted RBP19.3■□□□□ 0.68
PTPRA-205ENST00000399903 KAT14Q9H8E8 782 aa19.3■□□□□ 0.68
PTPRA-205ENST00000399903 SEC31BQ9NQW1 1179 aa19.3■□□□□ 0.68
PTPRA-205ENST00000399903 DENND2AQ9ULE3 1009 aa19.3■□□□□ 0.68
PTPRA-205ENST00000399903 MYO6Q9UM54 1294 aa19.3■□□□□ 0.68
PTPRA-205ENST00000399903 UBN2Q6ZU65 1347 aa19.3■□□□□ 0.68
PTPRA-205ENST00000399903 EIF5P55010 431 aaKnown RBP19.3■□□□□ 0.68
PTPRA-205ENST00000399903 FAM76AQ8TAV0 307 aa19.3■□□□□ 0.68
PTPRA-205ENST00000399903 PUS7LQ9H0K6 701 aaKnown RBP19.3■□□□□ 0.68
PTPRA-205ENST00000399903 IQSEC3Q9UPP2 1182 aaPredicted RBP19.3■□□□□ 0.68
PTPRA-205ENST00000399903 TNS2Q63HR2 1409 aa19.29■□□□□ 0.68
PTPRA-205ENST00000399903 IDH1O75874 414 aaKnown RBP19.29■□□□□ 0.68
PTPRA-205ENST00000399903 MATR3P43243 847 aaKnown RBP eCLIP19.29■□□□□ 0.683e-7■■■■□ 23.1
PTPRA-205ENST00000399903 IMMTQ16891 758 aaKnown RBP19.29■□□□□ 0.68
PTPRA-205ENST00000399903 CAPN7Q9Y6W3 813 aa19.29■□□□□ 0.68
PTPRA-205ENST00000399903 PARP4Q9UKK3 1724 aaKnown RBP19.29■□□□□ 0.68
PTPRA-205ENST00000399903 GOLGA6CA6NDK9 693 aa19.29■□□□□ 0.68
PTPRA-205ENST00000399903 GOLGA6DP0CG33 693 aa19.29■□□□□ 0.68
PTPRA-205ENST00000399903 INPP5BP32019 993 aa19.29■□□□□ 0.68
PTPRA-205ENST00000399903 USP5P45974 858 aa19.29■□□□□ 0.68
PTPRA-205ENST00000399903 BICDL1Q6ZP65 573 aa19.29■□□□□ 0.68
PTPRA-205ENST00000399903 GOLGA6AQ9NYA3 693 aa19.29■□□□□ 0.68
PTPRA-205ENST00000399903 TOGARAM1Q9Y4F4 1720 aa19.28■□□□□ 0.68
PTPRA-205ENST00000399903 RNF113AO15541 343 aaKnown RBP19.28■□□□□ 0.68
PTPRA-205ENST00000399903 SETQ01105 290 aaPredicted RBP19.28■□□□□ 0.68
PTPRA-205ENST00000399903 CCDC24Q8N4L8 307 aa19.28■□□□□ 0.68
PTPRA-205ENST00000399903 VPS16Q9H269 839 aa19.28■□□□□ 0.68
PTPRA-205ENST00000399903 HNRNPH1P31943 449 aaKnown RBP19.28■□□□□ 0.68
PTPRA-205ENST00000399903 PTF1AQ7RTS3 328 aa19.28■□□□□ 0.68
PTPRA-205ENST00000399903 SHTN1A0MZ66 631 aa19.28■□□□□ 0.68
PTPRA-205ENST00000399903 SYF2O95926 243 aaKnown RBP19.28■□□□□ 0.68
PTPRA-205ENST00000399903 FILIP1LQ4L180 1135 aa19.28■□□□□ 0.68
PTPRA-205ENST00000399903 ZEB2O60315 1214 aa19.27■□□□□ 0.68
PTPRA-205ENST00000399903 METAP2P50579 478 aaKnown RBP eCLIP19.27■□□□□ 0.68
PTPRA-205ENST00000399903 FXR1P51114 621 aaKnown RBP eCLIP19.27■□□□□ 0.68
PTPRA-205ENST00000399903 ZMYM1Q5SVZ6 1142 aa19.27■□□□□ 0.68
PTPRA-205ENST00000399903 MARCH10Q8NA82 808 aaPredicted RBP19.27■□□□□ 0.68
PTPRA-205ENST00000399903 FAM107BQ9H098 131 aa19.27■□□□□ 0.68
PTPRA-205ENST00000399903 WTIPA6NIX2 430 aaPredicted RBP19.27■□□□□ 0.68
PTPRA-205ENST00000399903 MCAMP43121 646 aa19.27■□□□□ 0.68
PTPRA-205ENST00000399903 CTSWP56202 376 aa19.27■□□□□ 0.68
PTPRA-205ENST00000399903 GNGT1P63211 74 aa19.27■□□□□ 0.68
PTPRA-205ENST00000399903 RPS6KA5O75582 802 aa19.27■□□□□ 0.67
PTPRA-205ENST00000399903 PHKA1P46020 1223 aa19.27■□□□□ 0.67
PTPRA-205ENST00000399903 ATP2B2Q01814 1243 aa19.27■□□□□ 0.67
PTPRA-205ENST00000399903 DSCC1Q9BVC3 393 aa19.27■□□□□ 0.67
PTPRA-205ENST00000399903 DACH1Q9UI36 760 aa19.27■□□□□ 0.67
PTPRA-205ENST00000399903 ANKRD18BA2A2Z9 1011 aa19.26■□□□□ 0.67
PTPRA-205ENST00000399903 SLC26A6Q9BXS9 759 aa19.26■□□□□ 0.67
PTPRA-205ENST00000399903 HPS5Q9UPZ3 1129 aa19.26■□□□□ 0.67
PTPRA-205ENST00000399903 N4BP3O15049 544 aa19.26■□□□□ 0.67
PTPRA-205ENST00000399903 ITPK1Q13572 414 aa19.26■□□□□ 0.67
PTPRA-205ENST00000399903 SUSD4Q5VX71 490 aa19.26■□□□□ 0.67
PTPRA-205ENST00000399903 RESP18Q5W5W9 173 aa19.26■□□□□ 0.67
PTPRA-205ENST00000399903 KRI1Q8N9T8 703 aaKnown RBP19.26■□□□□ 0.67
PTPRA-205ENST00000399903 KCNJ14Q9UNX9 436 aa19.26■□□□□ 0.67
PTPRA-205ENST00000399903 BCL9O00512 1426 aa19.25■□□□□ 0.67
PTPRA-205ENST00000399903 ECM2O94769 699 aaPredicted RBP19.25■□□□□ 0.67
PTPRA-205ENST00000399903 FAM98CQ17RN3 349 aaKnown RBP19.25■□□□□ 0.67
PTPRA-205ENST00000399903 CPLX2Q6PUV4 134 aaKnown RBP19.25■□□□□ 0.67
PTPRA-205ENST00000399903 USP49Q70CQ1 688 aa19.25■□□□□ 0.67
PTPRA-205ENST00000399903 GPIHBP1Q8IV16 184 aa19.25■□□□□ 0.67
PTPRA-205ENST00000399903 HPSEQ9Y251 543 aa19.25■□□□□ 0.67
PTPRA-205ENST00000399903 CRKLP46109 303 aaKnown RBP19.25■□□□□ 0.67
PTPRA-205ENST00000399903 NR1I3Q14994 352 aa19.25■□□□□ 0.67
PTPRA-205ENST00000399903 WHAMMP3Q1A5X7 153 aa19.25■□□□□ 0.67
PTPRA-205ENST00000399903 MAP9Q49MG5 647 aa19.25■□□□□ 0.67
PTPRA-205ENST00000399903 RNF187Q5TA31 235 aaPredicted RBP19.25■□□□□ 0.67
PTPRA-205ENST00000399903 INCENPQ9NQS7 918 aa19.25■□□□□ 0.67
PTPRA-205ENST00000399903 HPCAL4Q9UM19 191 aa19.25■□□□□ 0.67
PTPRA-205ENST00000399903 MYO1FO00160 1098 aa19.25■□□□□ 0.67
PTPRA-205ENST00000399903 FGAP02671 866 aa19.25■□□□□ 0.67
PTPRA-205ENST00000399903 CCDC172P0C7W6 258 aa19.25■□□□□ 0.67
PTPRA-205ENST00000399903 ATP1A2P50993 1020 aa19.25■□□□□ 0.67
PTPRA-205ENST00000399903 MMS19Q96T76 1030 aa19.25■□□□□ 0.67
PTPRA-205ENST00000399903 RIPOR2Q9Y4F9 1068 aa19.25■□□□□ 0.67
PTPRA-205ENST00000399903 SHANK3Q9BYB0 1731 aa19.24■□□□□ 0.67
PTPRA-205ENST00000399903 NKX2-3Q8TAU0 364 aa19.24■□□□□ 0.67
PTPRA-205ENST00000399903 HELLSQ9NRZ9 838 aa19.24■□□□□ 0.67
PTPRA-205ENST00000399903 MAPK8IP1Q9UQF2 711 aa19.24■□□□□ 0.67
PTPRA-205ENST00000399903 GOLGA6BA6NDN3 693 aa19.24■□□□□ 0.67
PTPRA-205ENST00000399903 ZNF213O14771 459 aa19.24■□□□□ 0.67
PTPRA-205ENST00000399903 CIAO1O76071 339 aa19.24■□□□□ 0.67
PTPRA-205ENST00000399903 KIAA0754O94854 1291 aa19.24■□□□□ 0.67
PTPRA-205ENST00000399903 CSF1RP07333 972 aa19.24■□□□□ 0.67
PTPRA-205ENST00000399903 TDO2P48775 406 aa19.24■□□□□ 0.67
PTPRA-205ENST00000399903 CMTR1Q8N1G2 835 aaKnown RBP19.24■□□□□ 0.67
PTPRA-205ENST00000399903 MLKLQ8NB16 471 aa19.24■□□□□ 0.67
PTPRA-205ENST00000399903 NCOA7Q8NI08 942 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms