RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 TRIM4Q9C037 500 aa12.32□□□□□ -0.44
CACNA1C-217ENST00000399641 TEKT2Q9UIF3 430 aa12.32□□□□□ -0.44
CACNA1C-217ENST00000399641 KRT19P08727 400 aa12.31□□□□□ -0.44
CACNA1C-217ENST00000399641 RTN1Q16799 776 aa12.31□□□□□ -0.44
CACNA1C-217ENST00000399641 GIMAP6Q6P9H5 292 aa12.31□□□□□ -0.44
CACNA1C-217ENST00000399641 CTAGE1Q96RT6 745 aa12.31□□□□□ -0.44
CACNA1C-217ENST00000399641 NEUROG2Q9H2A3 272 aa12.31□□□□□ -0.44
CACNA1C-217ENST00000399641 MMEL1Q495T6 779 aa12.31□□□□□ -0.44
CACNA1C-217ENST00000399641 WDR44Q5JSH3 913 aa12.31□□□□□ -0.44
CACNA1C-217ENST00000399641 CDCA7LQ96GN5 454 aa12.31□□□□□ -0.44
CACNA1C-217ENST00000399641 PRDM5Q9NQX1 630 aaPredicted RBP12.31□□□□□ -0.44
CACNA1C-217ENST00000399641 MRFAP1Q9Y605 127 aa12.31□□□□□ -0.44
CACNA1C-217ENST00000399641 CCDC141Q6ZP82 1450 aa12.31□□□□□ -0.44
CACNA1C-217ENST00000399641 SYNJ2BP-COX16A0A087WUM0 186 aa12.31□□□□□ -0.44
CACNA1C-217ENST00000399641 RNASELQ05823 741 aaKnown RBP12.31□□□□□ -0.44
CACNA1C-217ENST00000399641 NLRP9Q7RTR0 991 aa12.31□□□□□ -0.44
CACNA1C-217ENST00000399641 DDX17Q92841 729 aaKnown RBP12.31□□□□□ -0.44
CACNA1C-217ENST00000399641 C6orf203Q9P0P8 240 aaPredicted RBP12.31□□□□□ -0.44
CACNA1C-217ENST00000399641 COX16Q9P0S2 106 aa12.31□□□□□ -0.44
CACNA1C-217ENST00000399641 HCLS1P14317 486 aaPredicted RBP12.31□□□□□ -0.44
CACNA1C-217ENST00000399641 SRGAP1Q7Z6B7 1085 aa12.31□□□□□ -0.44
CACNA1C-217ENST00000399641 DHX58Q96C10 678 aa12.31□□□□□ -0.44
CACNA1C-217ENST00000399641 KIAA1107Q9UPP5 1409 aa12.31□□□□□ -0.44
CACNA1C-217ENST00000399641 KIF14Q15058 1648 aa12.31□□□□□ -0.44
CACNA1C-217ENST00000399641 GCP02774 474 aa12.31□□□□□ -0.44
CACNA1C-217ENST00000399641 SUPT20HL1Q3ZLR7 823 aa12.31□□□□□ -0.44
CACNA1C-217ENST00000399641 ANGPTL8Q6UXH0 198 aa12.31□□□□□ -0.44
CACNA1C-217ENST00000399641 RYBPQ8N488 228 aaPredicted RBP12.31□□□□□ -0.44
CACNA1C-217ENST00000399641 LRGUKQ96M69 825 aa12.31□□□□□ -0.44
CACNA1C-217ENST00000399641 FGD4Q96M96 766 aa12.31□□□□□ -0.44
CACNA1C-217ENST00000399641 SPATS2LQ9NUQ6 558 aaKnown RBP12.31□□□□□ -0.44
CACNA1C-217ENST00000399641 SBNO2Q9Y2G9 1366 aa12.3□□□□□ -0.44
CACNA1C-217ENST00000399641 TBC1D12O60347 775 aa12.3□□□□□ -0.44
CACNA1C-217ENST00000399641 GNAT2P19087 354 aa12.3□□□□□ -0.44
CACNA1C-217ENST00000399641 CALML3P27482 149 aa12.3□□□□□ -0.44
CACNA1C-217ENST00000399641 Q3C1V9 767 aa12.3□□□□□ -0.44
CACNA1C-217ENST00000399641 ZC3H12BQ5HYM0 836 aaKnown RBP12.3□□□□□ -0.44
CACNA1C-217ENST00000399641 HS2ST1Q7LGA3 356 aa12.3□□□□□ -0.44
CACNA1C-217ENST00000399641 NLGN1Q8N2Q7 840 aa12.3□□□□□ -0.44
CACNA1C-217ENST00000399641 PALMDQ9NP74 551 aa12.3□□□□□ -0.44
CACNA1C-217ENST00000399641 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.3□□□□□ -0.44
CACNA1C-217ENST00000399641 SDCCAG3Q96C92 435 aa12.3□□□□□ -0.44
CACNA1C-217ENST00000399641 BAIAP2L1Q9UHR4 511 aa12.3□□□□□ -0.44
CACNA1C-217ENST00000399641 MAGI1Q96QZ7 1491 aaPredicted RBP12.3□□□□□ -0.44
CACNA1C-217ENST00000399641 KRT79Q5XKE5 535 aa12.3□□□□□ -0.44
CACNA1C-217ENST00000399641 TRMT10CQ7L0Y3 403 aaKnown RBP12.3□□□□□ -0.44
CACNA1C-217ENST00000399641 CERS3Q8IU89 383 aa12.3□□□□□ -0.44
CACNA1C-217ENST00000399641 LMCD1Q9NZU5 365 aa12.3□□□□□ -0.44
CACNA1C-217ENST00000399641 GSTA4O15217 222 aa12.3□□□□□ -0.44
CACNA1C-217ENST00000399641 GSDMDP57764 484 aa12.3□□□□□ -0.44
CACNA1C-217ENST00000399641 NEK11Q8NG66 645 aa12.3□□□□□ -0.44
CACNA1C-217ENST00000399641 LMBR1Q8WVP7 490 aa12.3□□□□□ -0.44
CACNA1C-217ENST00000399641 GCNAQ96QF7 691 aa12.3□□□□□ -0.44
CACNA1C-217ENST00000399641 LRRC2Q9BYS8 371 aa12.3□□□□□ -0.44
CACNA1C-217ENST00000399641 VPS37BQ9H9H4 285 aa12.3□□□□□ -0.44
CACNA1C-217ENST00000399641 RIMS2Q9UQ26 1411 aa12.3□□□□□ -0.44
CACNA1C-217ENST00000399641 PSDA5PKW4 1024 aaPredicted RBP12.3□□□□□ -0.44
CACNA1C-217ENST00000399641 STX10O60499 249 aa12.3□□□□□ -0.44
CACNA1C-217ENST00000399641 XPAP23025 273 aaPredicted RBP12.3□□□□□ -0.44
CACNA1C-217ENST00000399641 PIK3R5Q8WYR1 880 aa12.3□□□□□ -0.44
CACNA1C-217ENST00000399641 GEMIN8Q9NWZ8 242 aaKnown RBP12.3□□□□□ -0.44
CACNA1C-217ENST00000399641 DOK7Q18PE1 504 aa12.29□□□□□ -0.44
CACNA1C-217ENST00000399641 USH1GQ495M9 461 aa12.29□□□□□ -0.44
CACNA1C-217ENST00000399641 SUCLA2Q9P2R7 463 aaPredicted RBP12.29□□□□□ -0.44
CACNA1C-217ENST00000399641 PLEKHG3A1L390 1219 aa12.29□□□□□ -0.44
CACNA1C-217ENST00000399641 MCM5P33992 734 aa12.29□□□□□ -0.44
CACNA1C-217ENST00000399641 RILPL1Q5EBL4 403 aa12.29□□□□□ -0.44
CACNA1C-217ENST00000399641 SMAP1Q8IYB5 467 aaPredicted RBP12.29□□□□□ -0.44
CACNA1C-217ENST00000399641 RTEL1Q9NZ71 1219 aa12.29□□□□□ -0.44
CACNA1C-217ENST00000399641 FAM95CA0A1B0GW59 222 aa12.29□□□□□ -0.44
CACNA1C-217ENST00000399641 PDE4DQ08499 809 aa12.29□□□□□ -0.44
CACNA1C-217ENST00000399641 ERFEQ4G0M1 354 aa12.29□□□□□ -0.44
CACNA1C-217ENST00000399641 GPR161Q8N6U8 529 aaKnown RBP12.29□□□□□ -0.44
CACNA1C-217ENST00000399641 EEF1B2P24534 225 aaKnown RBP12.29□□□□□ -0.44
CACNA1C-217ENST00000399641 PTPROQ16827 1216 aa12.29□□□□□ -0.44
CACNA1C-217ENST00000399641 AOPEPQ8N6M6 819 aa12.29□□□□□ -0.44
CACNA1C-217ENST00000399641 PSMB7Q99436 277 aa12.29□□□□□ -0.44
CACNA1C-217ENST00000399641 CARD10Q9BWT7 1032 aa12.29□□□□□ -0.44
CACNA1C-217ENST00000399641 EHBP1L1Q8N3D4 1523 aa12.29□□□□□ -0.44
CACNA1C-217ENST00000399641 ZBTB43O43298 467 aa12.29□□□□□ -0.44
CACNA1C-217ENST00000399641 IL15P40933 162 aaPredicted RBP12.29□□□□□ -0.44
CACNA1C-217ENST00000399641 KCTD2Q14681 263 aa12.29□□□□□ -0.44
CACNA1C-217ENST00000399641 ARHGEF16Q5VV41 709 aa12.29□□□□□ -0.44
CACNA1C-217ENST00000399641 KLHDC4Q8TBB5 520 aa12.29□□□□□ -0.44
CACNA1C-217ENST00000399641 HPS4Q9NQG7 708 aa12.29□□□□□ -0.44
CACNA1C-217ENST00000399641 RAD51AP2Q09MP3 1159 aa12.28□□□□□ -0.44
CACNA1C-217ENST00000399641 ZNF467Q7Z7K2 595 aaPredicted RBP12.28□□□□□ -0.44
CACNA1C-217ENST00000399641 PRPF6O94906 941 aaKnown RBP12.28□□□□□ -0.44
CACNA1C-217ENST00000399641 KCNA1Q09470 495 aa12.28□□□□□ -0.44
CACNA1C-217ENST00000399641 ANO6Q4KMQ2 910 aa12.28□□□□□ -0.44
CACNA1C-217ENST00000399641 PIP4K2CQ8TBX8 421 aa12.28□□□□□ -0.44
CACNA1C-217ENST00000399641 RPS6KC1Q96S38 1066 aa12.28□□□□□ -0.44
CACNA1C-217ENST00000399641 RASSF4Q9H2L5 321 aa12.28□□□□□ -0.44
CACNA1C-217ENST00000399641 EEF1DP29692 281 aaKnown RBP12.28□□□□□ -0.44
CACNA1C-217ENST00000399641 IREB2P48200 963 aaKnown RBP12.28□□□□□ -0.44
CACNA1C-217ENST00000399641 ARHGAP44Q17R89 818 aa12.28□□□□□ -0.44
CACNA1C-217ENST00000399641 FAM186BQ8IYM0 893 aa12.28□□□□□ -0.44
CACNA1C-217ENST00000399641 SLC17A8Q8NDX2 589 aa12.28□□□□□ -0.44
CACNA1C-217ENST00000399641 INPP5FQ9Y2H2 1132 aa12.28□□□□□ -0.44
CACNA1C-217ENST00000399641 RTL9Q8NET4 1388 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms