RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 RILPL1Q5EBL4 403 aa8.89□□□□□ -0.99
USP47-203ENST00000399455 FAM102BQ5T8I3 360 aa8.89□□□□□ -0.99
USP47-203ENST00000399455 TAF3Q5VWG9 929 aa8.89□□□□□ -0.99
USP47-203ENST00000399455 PIK3AP1Q6ZUJ8 805 aa8.89□□□□□ -0.99
USP47-203ENST00000399455 TSPYL6Q8N831 410 aa8.89□□□□□ -0.99
USP47-203ENST00000399455 KBTBD3Q8NAB2 608 aa8.89□□□□□ -0.99
USP47-203ENST00000399455 BACH2Q9BYV9 841 aa8.89□□□□□ -0.99
USP47-203ENST00000399455 CEP152O94986 1710 aa8.89□□□□□ -0.99
USP47-203ENST00000399455 ERBB3P21860 1342 aa8.89□□□□□ -0.99
USP47-203ENST00000399455 POTEB2H3BUK9 544 aa8.89□□□□□ -0.99
USP47-203ENST00000399455 GJC1P36383 396 aa8.89□□□□□ -0.99
USP47-203ENST00000399455 UBE2HP62256 183 aa8.89□□□□□ -0.99
USP47-203ENST00000399455 FNBP4Q8N3X1 1017 aaPredicted RBP8.89□□□□□ -0.99
USP47-203ENST00000399455 ZHX1Q9UKY1 873 aaPredicted RBP8.89□□□□□ -0.99
USP47-203ENST00000399455 AGTPBP1Q9UPW5 1226 aa8.89□□□□□ -0.99
USP47-203ENST00000399455 TMEM110-MUSTN1A8MSY1 372 aa8.89□□□□□ -0.99
USP47-203ENST00000399455 SPTLC2O15270 562 aa8.89□□□□□ -0.99
USP47-203ENST00000399455 AKR1B10O60218 316 aa8.89□□□□□ -0.99
USP47-203ENST00000399455 REXO1Q8N1G1 1221 aaKnown RBP8.89□□□□□ -0.99
USP47-203ENST00000399455 PSTPIP2Q9H939 334 aa8.89□□□□□ -0.99
USP47-203ENST00000399455 COL15A1P39059 1388 aa8.89□□□□□ -0.99
USP47-203ENST00000399455 BIN1O00499 593 aa8.89□□□□□ -0.99
USP47-203ENST00000399455 DNA2P51530 1060 aa8.89□□□□□ -0.99
USP47-203ENST00000399455 POLGP54098 1239 aaPredicted RBP8.89□□□□□ -0.99
USP47-203ENST00000399455 CCDC184Q52MB2 194 aa8.89□□□□□ -0.99
USP47-203ENST00000399455 GALNT17Q6IS24 598 aa8.89□□□□□ -0.99
USP47-203ENST00000399455 FAM160B2Q86V87 743 aa8.89□□□□□ -0.99
USP47-203ENST00000399455 ZSCAN10Q96SZ4 725 aaPredicted RBP8.89□□□□□ -0.99
USP47-203ENST00000399455 ANO3Q9BYT9 981 aa8.89□□□□□ -0.99
USP47-203ENST00000399455 NARFQ9UHQ1 456 aa8.89□□□□□ -0.99
USP47-203ENST00000399455 IQGAP3Q86VI3 1631 aa8.88□□□□□ -0.99
USP47-203ENST00000399455 TLR3O15455 904 aaKnown RBP8.88□□□□□ -0.99
USP47-203ENST00000399455 TTLL1O95922 423 aa8.88□□□□□ -0.99
USP47-203ENST00000399455 TXNRD1Q16881 649 aa8.88□□□□□ -0.99
USP47-203ENST00000399455 KIAA1841Q6NSI8 718 aa8.88□□□□□ -0.99
USP47-203ENST00000399455 FASTKD5Q7L8L6 764 aaKnown RBP8.88□□□□□ -0.99
USP47-203ENST00000399455 TXNDC16Q9P2K2 825 aa8.88□□□□□ -0.99
USP47-203ENST00000399455 ASPRV1Q53RT3 343 aa8.88□□□□□ -0.99
USP47-203ENST00000399455 CRACR2AQ9BSW2 395 aa8.88□□□□□ -0.99
USP47-203ENST00000399455 PI4KBQ9UBF8 816 aa8.88□□□□□ -0.99
USP47-203ENST00000399455 AKT3Q9Y243 479 aa8.88□□□□□ -0.99
USP47-203ENST00000399455 ZBTB1Q9Y2K1 713 aa8.88□□□□□ -0.99
USP47-203ENST00000399455 FRMPD2Q68DX3 1309 aaPredicted RBP8.88□□□□□ -0.99
USP47-203ENST00000399455 ERCC6L2Q5T890 1561 aa8.88□□□□□ -0.99
USP47-203ENST00000399455 GOLGA6CA6NDK9 693 aa8.88□□□□□ -0.99
USP47-203ENST00000399455 GOLGA6BA6NDN3 693 aa8.88□□□□□ -0.99
USP47-203ENST00000399455 TMEM232C9JQI7 657 aa8.88□□□□□ -0.99
USP47-203ENST00000399455 STK25O00506 426 aa8.88□□□□□ -0.99
USP47-203ENST00000399455 GOLGA6DP0CG33 693 aa8.88□□□□□ -0.99
USP47-203ENST00000399455 ZNF174Q15697 407 aa8.88□□□□□ -0.99
USP47-203ENST00000399455 GOLGA6AQ9NYA3 693 aa8.88□□□□□ -0.99
USP47-203ENST00000399455 UQCRHLA0A096LP55 91 aa8.88□□□□□ -0.99
USP47-203ENST00000399455 SH3BP5O60239 455 aa8.88□□□□□ -0.99
USP47-203ENST00000399455 ECE2O60344 883 aa8.88□□□□□ -0.99
USP47-203ENST00000399455 DDAH1O94760 285 aa8.88□□□□□ -0.99
USP47-203ENST00000399455 ARID4AP29374 1257 aaPredicted RBP8.88□□□□□ -0.99
USP47-203ENST00000399455 KRT24Q2M2I5 525 aa8.88□□□□□ -0.99
USP47-203ENST00000399455 NECAB1Q8N987 351 aa8.88□□□□□ -0.99
USP47-203ENST00000399455 USP25Q9UHP3 1055 aa8.88□□□□□ -0.99
USP47-203ENST00000399455 FAM169AQ9Y6X4 670 aa8.88□□□□□ -0.99
USP47-203ENST00000399455 DMP1Q13316 513 aaPredicted RBP8.88□□□□□ -0.99
USP47-203ENST00000399455 PPP2R5AQ15172 486 aa8.88□□□□□ -0.99
USP47-203ENST00000399455 CEP128Q6ZU80 1094 aa8.88□□□□□ -0.99
USP47-203ENST00000399455 PPP2R3CQ969Q6 453 aa8.88□□□□□ -0.99
USP47-203ENST00000399455 CCDC94Q9BW85 323 aaPredicted RBP8.88□□□□□ -0.99
USP47-203ENST00000399455 FOSP01100 380 aaPredicted RBP8.88□□□□□ -0.99
USP47-203ENST00000399455 TMED8Q6PL24 325 aaPredicted RBP8.88□□□□□ -0.99
USP47-203ENST00000399455 LLPHQ9BRT6 129 aaKnown RBP8.88□□□□□ -0.99
USP47-203ENST00000399455 CSRNP2Q9H175 543 aa8.88□□□□□ -0.99
USP47-203ENST00000399455 TFIP11Q9UBB9 837 aaKnown RBP8.88□□□□□ -0.99
USP47-203ENST00000399455 TXKP42681 527 aa8.87□□□□□ -0.99
USP47-203ENST00000399455 GPATCH4Q5T3I0 446 aaKnown RBP8.87□□□□□ -0.99
USP47-203ENST00000399455 GIMAP8Q8ND71 665 aaPredicted RBP8.87□□□□□ -0.99
USP47-203ENST00000399455 IQCGQ9H095 443 aaKnown RBP8.87□□□□□ -0.99
USP47-203ENST00000399455 V9GY48 417 aaPredicted RBP8.87□□□□□ -0.99
USP47-203ENST00000399455 PTPRMP28827 1452 aa8.87□□□□□ -0.99
USP47-203ENST00000399455 VWA3AA6NCI4 1184 aa8.87□□□□□ -0.99
USP47-203ENST00000399455 RPS6KB1P23443 525 aa8.87□□□□□ -0.99
USP47-203ENST00000399455 LIG4P49917 911 aa8.87□□□□□ -0.99
USP47-203ENST00000399455 STAT2P52630 851 aa8.87□□□□□ -0.99
USP47-203ENST00000399455 NBPF11Q86T75 865 aa8.87□□□□□ -0.99
USP47-203ENST00000399455 GOLGA5Q8TBA6 731 aa8.87□□□□□ -0.99
USP47-203ENST00000399455 PIGBQ92521 554 aa8.87□□□□□ -0.99
USP47-203ENST00000399455 DSCC1Q9BVC3 393 aa8.87□□□□□ -0.99
USP47-203ENST00000399455 STIM2Q9P246 746 aa8.87□□□□□ -0.99
USP47-203ENST00000399455 PTPREP23469 700 aa8.87□□□□□ -0.99
USP47-203ENST00000399455 IGBP1P78318 339 aa8.87□□□□□ -0.99
USP47-203ENST00000399455 SNX29Q8TEQ0 813 aa8.87□□□□□ -0.99
USP47-203ENST00000399455 ZFYVE28Q9HCC9 887 aa8.87□□□□□ -0.99
USP47-203ENST00000399455 SRP68Q9UHB9 627 aaKnown RBP8.87□□□□□ -0.99
USP47-203ENST00000399455 RIOK3O14730 519 aaKnown RBP8.87□□□□□ -0.99
USP47-203ENST00000399455 RXRAP19793 462 aa8.87□□□□□ -0.99
USP47-203ENST00000399455 CKAP4Q07065 602 aaKnown RBP8.87□□□□□ -0.99
USP47-203ENST00000399455 USP17L2Q6R6M4 530 aa8.87□□□□□ -0.99
USP47-203ENST00000399455 SEPT14Q6ZU15 432 aa8.87□□□□□ -0.99
USP47-203ENST00000399455 G2E3Q7L622 706 aa8.87□□□□□ -0.99
USP47-203ENST00000399455 PNMA8AQ86V59 439 aaPredicted RBP8.87□□□□□ -0.99
USP47-203ENST00000399455 GTF3C2Q8WUA4 911 aaPredicted RBP8.87□□□□□ -0.99
USP47-203ENST00000399455 EXOC4Q96A65 974 aa8.87□□□□□ -0.99
USP47-203ENST00000399455 TSGA10Q9BZW7 698 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms