RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 STK36Q9NRP7 1315 aa15.85■□□□□ 0.13
APOB-202ENST00000399256 COL14A1Q05707 1796 aaKnown RBP15.85■□□□□ 0.13
APOB-202ENST00000399256 CUL4BQ13620 913 aa15.85■□□□□ 0.13
APOB-202ENST00000399256 FILIP1LQ4L180 1135 aa15.85■□□□□ 0.13
APOB-202ENST00000399256 LRRC31Q6UY01 552 aa15.85■□□□□ 0.13
APOB-202ENST00000399256 CNGA4Q8IV77 575 aa15.85■□□□□ 0.13
APOB-202ENST00000399256 WASF1Q92558 559 aa15.85■□□□□ 0.13
APOB-202ENST00000399256 EPSTI1Q96J88 318 aa15.85■□□□□ 0.13
APOB-202ENST00000399256 WWC3Q9ULE0 1092 aa15.85■□□□□ 0.13
APOB-202ENST00000399256 IFNAR1P17181 557 aa15.85■□□□□ 0.13
APOB-202ENST00000399256 WHAMMP3Q1A5X7 153 aa15.85■□□□□ 0.13
APOB-202ENST00000399256 RRP12Q5JTH9 1297 aaKnown RBP15.85■□□□□ 0.13
APOB-202ENST00000399256 METTL24Q5JXM2 366 aa15.85■□□□□ 0.13
APOB-202ENST00000399256 FAM89AQ96GI7 184 aa15.85■□□□□ 0.13
APOB-202ENST00000399256 GBP3Q9H0R5 595 aa15.85■□□□□ 0.13
APOB-202ENST00000399256 FAM205CA6NFA0 338 aa15.84■□□□□ 0.13
APOB-202ENST00000399256 RNF225M0QZC1 329 aaPredicted RBP15.84■□□□□ 0.13
APOB-202ENST00000399256 AKAP17AQ02040 695 aaKnown RBP15.84■□□□□ 0.13
APOB-202ENST00000399256 TUBB2AQ13885 445 aa15.84■□□□□ 0.13
APOB-202ENST00000399256 CDKAL1Q5VV42 579 aa15.84■□□□□ 0.13
APOB-202ENST00000399256 TRIM22Q8IYM9 498 aa15.84■□□□□ 0.13
APOB-202ENST00000399256 ZNF579Q8NAF0 562 aaKnown RBP15.84■□□□□ 0.13
APOB-202ENST00000399256 STAMQ92783 540 aa15.84■□□□□ 0.13
APOB-202ENST00000399256 SLF1Q9BQI6 1058 aa15.84■□□□□ 0.13
APOB-202ENST00000399256 TUBB2BQ9BVA1 445 aa15.84■□□□□ 0.13
APOB-202ENST00000399256 TOMM22Q9NS69 142 aa15.84■□□□□ 0.13
APOB-202ENST00000399256 TACC3Q9Y6A5 838 aa15.84■□□□□ 0.13
APOB-202ENST00000399256 ARHGAP25P42331 645 aa15.84■□□□□ 0.13
APOB-202ENST00000399256 SKIDA1Q1XH10 827 aa15.84■□□□□ 0.13
APOB-202ENST00000399256 NOM1Q5C9Z4 860 aaKnown RBP15.84■□□□□ 0.13
APOB-202ENST00000399256 GOLGA6L1Q8N7Z2 621 aa15.84■□□□□ 0.13
APOB-202ENST00000399256 FOXP1Q9H334 677 aaPredicted RBP15.84■□□□□ 0.13
APOB-202ENST00000399256 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.84■□□□□ 0.133e-88■■□□□ 11.9
APOB-202ENST00000399256 CTNND2Q9UQB3 1225 aa15.84■□□□□ 0.13
APOB-202ENST00000399256 LAMB4A4D0S4 1761 aa15.84■□□□□ 0.13
APOB-202ENST00000399256 EIF3CLB5ME19 914 aaKnown RBP15.83■□□□□ 0.13
APOB-202ENST00000399256 RPS6KA5O75582 802 aa15.83■□□□□ 0.13
APOB-202ENST00000399256 MSL3Q8N5Y2 521 aaKnown RBP15.83■□□□□ 0.13
APOB-202ENST00000399256 EIF3CQ99613 913 aaKnown RBP15.83■□□□□ 0.13
APOB-202ENST00000399256 TRIM10Q9UDY6 481 aa15.83■□□□□ 0.13
APOB-202ENST00000399256 MYO6Q9UM54 1294 aa15.83■□□□□ 0.13
APOB-202ENST00000399256 GLI3P10071 1580 aa15.83■□□□□ 0.13
APOB-202ENST00000399256 MYH7P12883 1935 aa15.83■□□□□ 0.13
APOB-202ENST00000399256 PKD1L3Q7Z443 1732 aa15.83■□□□□ 0.13
APOB-202ENST00000399256 DPYDQ12882 1025 aa15.83■□□□□ 0.12
APOB-202ENST00000399256 IFIT5Q13325 482 aaKnown RBP15.83■□□□□ 0.12
APOB-202ENST00000399256 RTN1Q16799 776 aa15.83■□□□□ 0.12
APOB-202ENST00000399256 AIDAQ96BJ3 306 aa15.83■□□□□ 0.12
APOB-202ENST00000399256 PAGE5Q96GU1 130 aa15.83■□□□□ 0.12
APOB-202ENST00000399256 CTAGE1Q96RT6 745 aa15.83■□□□□ 0.12
APOB-202ENST00000399256 NUP88Q99567 741 aaPredicted RBP15.83■□□□□ 0.12
APOB-202ENST00000399256 VPS16Q9H269 839 aa15.83■□□□□ 0.12
APOB-202ENST00000399256 PDE6AP16499 860 aa15.83■□□□□ 0.12
APOB-202ENST00000399256 PACS2Q86VP3 889 aa15.83■□□□□ 0.12
APOB-202ENST00000399256 CERKQ8TCT0 537 aa15.83■□□□□ 0.12
APOB-202ENST00000399256 STRN4Q9NRL3 753 aa15.83■□□□□ 0.12
APOB-202ENST00000399256 ABHD10Q9NUJ1 306 aa15.83■□□□□ 0.12
APOB-202ENST00000399256 NUP188Q5SRE5 1749 aa15.83■□□□□ 0.12
APOB-202ENST00000399256 RNF40O75150 1001 aa15.82■□□□□ 0.12
APOB-202ENST00000399256 LIFRP42702 1097 aa15.82■□□□□ 0.12
APOB-202ENST00000399256 TUBB4BP68371 445 aa15.82■□□□□ 0.12
APOB-202ENST00000399256 TMTC1Q8IUR5 882 aa15.82■□□□□ 0.12
APOB-202ENST00000399256 ACBD3Q9H3P7 528 aa15.82■□□□□ 0.12
APOB-202ENST00000399256 CEP131Q9UPN4 1083 aa15.82■□□□□ 0.12
APOB-202ENST00000399256 PPP1R3GB7ZBB8 358 aa15.82■□□□□ 0.12
APOB-202ENST00000399256 N4BP3O15049 544 aa15.82■□□□□ 0.12
APOB-202ENST00000399256 MAGEA9P43362 315 aa15.82■□□□□ 0.12
APOB-202ENST00000399256 TOM1L2Q6ZVM7 507 aa15.82■□□□□ 0.12
APOB-202ENST00000399256 SYNE4Q8N205 404 aa15.82■□□□□ 0.12
APOB-202ENST00000399256 NUP133Q8WUM0 1156 aa15.82■□□□□ 0.12
APOB-202ENST00000399256 GDAP1L1Q96MZ0 367 aa15.82■□□□□ 0.12
APOB-202ENST00000399256 EPB41L4AQ9HCS5 686 aaPredicted RBP15.82■□□□□ 0.12
APOB-202ENST00000399256 HDAC6Q9UBN7 1215 aa15.82■□□□□ 0.12
APOB-202ENST00000399256 GUCA1BQ9UMX6 200 aa15.82■□□□□ 0.12
APOB-202ENST00000399256 ENC1O14682 589 aa15.81■□□□□ 0.12
APOB-202ENST00000399256 AMPD2Q01433 879 aa15.81■□□□□ 0.12
APOB-202ENST00000399256 KRT31Q15323 416 aa15.81■□□□□ 0.12
APOB-202ENST00000399256 TTC31Q49AM3 519 aaPredicted RBP15.81■□□□□ 0.12
APOB-202ENST00000399256 RIC1Q4ADV7 1423 aa15.81■□□□□ 0.12
APOB-202ENST00000399256 CCDC51Q96ER9 411 aa15.81■□□□□ 0.12
APOB-202ENST00000399256 ABCC12Q96J65 1359 aa15.81■□□□□ 0.12
APOB-202ENST00000399256 STRBPQ96SI9 672 aaKnown RBP15.81■□□□□ 0.12
APOB-202ENST00000399256 NAPBQ9H115 298 aa15.81■□□□□ 0.12
APOB-202ENST00000399256 MKRN1Q9UHC7 482 aaKnown RBP15.81■□□□□ 0.12
APOB-202ENST00000399256 PARP4Q9UKK3 1724 aaKnown RBP15.81■□□□□ 0.12
APOB-202ENST00000399256 UBE3CQ15386 1083 aa15.81■□□□□ 0.12
APOB-202ENST00000399256 SYMPKQ92797 1274 aaKnown RBP15.81■□□□□ 0.12
APOB-202ENST00000399256 MED4Q9NPJ6 270 aa15.81■□□□□ 0.12
APOB-202ENST00000399256 TAB2Q9NYJ8 693 aa15.81■□□□□ 0.12
APOB-202ENST00000399256 MYH8P13535 1937 aa15.81■□□□□ 0.12
APOB-202ENST00000399256 CYP26C1Q6V0L0 522 aa15.81■□□□□ 0.12
APOB-202ENST00000399256 LDHAL6AQ6ZMR3 332 aa15.81■□□□□ 0.12
APOB-202ENST00000399256 CCDC148Q8NFR7 591 aa15.81■□□□□ 0.12
APOB-202ENST00000399256 DEXIO95424 95 aa15.8■□□□□ 0.12
APOB-202ENST00000399256 IFNL3Q8IZI9 196 aa15.8■□□□□ 0.12
APOB-202ENST00000399256 AFAP1L1Q8TED9 768 aa15.8■□□□□ 0.12
APOB-202ENST00000399256 RIN2Q8WYP3 895 aaPredicted RBP15.8■□□□□ 0.12
APOB-202ENST00000399256 CHP1Q99653 195 aa15.8■□□□□ 0.12
APOB-202ENST00000399256 BLZF1Q9H2G9 400 aa15.8■□□□□ 0.12
APOB-202ENST00000399256 TFR2Q9UP52 801 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms