RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 PICALMQ13492 652 aa16.36■□□□□ 0.21
RPRD1A-202ENST00000399022 SEPT7Q16181 437 aaKnown RBP16.36■□□□□ 0.21
RPRD1A-202ENST00000399022 FCHSD1Q86WN1 690 aa16.36■□□□□ 0.21
RPRD1A-202ENST00000399022 SDR42E1Q8WUS8 393 aa16.36■□□□□ 0.21
RPRD1A-202ENST00000399022 MMRN2Q9H8L6 949 aa16.36■□□□□ 0.21
RPRD1A-202ENST00000399022 SAMM50Q9Y512 469 aa16.36■□□□□ 0.21
RPRD1A-202ENST00000399022 CLIC4Q9Y696 253 aa16.36■□□□□ 0.21
RPRD1A-202ENST00000399022 SLC35F6Q8N357 371 aa16.36■□□□□ 0.21
RPRD1A-202ENST00000399022 PPP1R1BQ9UD71 204 aaPredicted RBP16.36■□□□□ 0.21
RPRD1A-202ENST00000399022 DEPDC5O75140 1603 aa16.36■□□□□ 0.21
RPRD1A-202ENST00000399022 ZMYND10O75800 440 aa16.36■□□□□ 0.21
RPRD1A-202ENST00000399022 CASP8Q14790 479 aa16.36■□□□□ 0.21
RPRD1A-202ENST00000399022 MCTP2Q6DN12 878 aa16.36■□□□□ 0.21
RPRD1A-202ENST00000399022 SRLQ86TD4 932 aa16.36■□□□□ 0.21
RPRD1A-202ENST00000399022 JPH2Q9BR39 696 aaPredicted RBP16.36■□□□□ 0.21
RPRD1A-202ENST00000399022 UBA5Q9GZZ9 404 aa16.36■□□□□ 0.21
RPRD1A-202ENST00000399022 PUS7LQ9H0K6 701 aaKnown RBP16.36■□□□□ 0.21
RPRD1A-202ENST00000399022 RMND1Q9NWS8 449 aa16.36■□□□□ 0.21
RPRD1A-202ENST00000399022 AATFQ9NY61 560 aaKnown RBP eCLIP16.36■□□□□ 0.21
RPRD1A-202ENST00000399022 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.36■□□□□ 0.21
RPRD1A-202ENST00000399022 SAR1BQ9Y6B6 198 aa16.36■□□□□ 0.21
RPRD1A-202ENST00000399022 COL3A1P02461 1466 aaPredicted RBP16.36■□□□□ 0.21
RPRD1A-202ENST00000399022 GYG1P46976 350 aa16.35■□□□□ 0.21
RPRD1A-202ENST00000399022 POSTNQ15063 836 aa16.35■□□□□ 0.21
RPRD1A-202ENST00000399022 PARP10Q53GL7 1025 aa16.35■□□□□ 0.21
RPRD1A-202ENST00000399022 C8orf74Q6P047 294 aa16.35■□□□□ 0.21
RPRD1A-202ENST00000399022 GIGYF2Q6Y7W6 1299 aaKnown RBP16.35■□□□□ 0.21
RPRD1A-202ENST00000399022 MMS22LQ6ZRQ5 1243 aa16.35■□□□□ 0.21
RPRD1A-202ENST00000399022 ANKS4BQ8N8V4 417 aa16.35■□□□□ 0.21
RPRD1A-202ENST00000399022 TLDC2A0PJX2 215 aa16.35■□□□□ 0.21
RPRD1A-202ENST00000399022 SNAP23O00161 211 aa16.35■□□□□ 0.21
RPRD1A-202ENST00000399022 PSMA7O14818 248 aa16.35■□□□□ 0.21
RPRD1A-202ENST00000399022 RILPL1Q5EBL4 403 aa16.35■□□□□ 0.21
RPRD1A-202ENST00000399022 AKNAD1Q5T1N1 836 aa16.35■□□□□ 0.21
RPRD1A-202ENST00000399022 WDR17Q8IZU2 1322 aa16.35■□□□□ 0.21
RPRD1A-202ENST00000399022 DLC1Q96QB1 1528 aa16.35■□□□□ 0.21
RPRD1A-202ENST00000399022 CUTAO60888 179 aa16.35■□□□□ 0.21
RPRD1A-202ENST00000399022 PDE8BO95263 885 aa16.35■□□□□ 0.21
RPRD1A-202ENST00000399022 DEXIO95424 95 aa16.35■□□□□ 0.21
RPRD1A-202ENST00000399022 PNMA8AQ86V59 439 aaPredicted RBP16.35■□□□□ 0.21
RPRD1A-202ENST00000399022 GJB4Q9NTQ9 266 aa16.35■□□□□ 0.21
RPRD1A-202ENST00000399022 TAB2Q9NYJ8 693 aa16.35■□□□□ 0.21
RPRD1A-202ENST00000399022 HEG1Q9ULI3 1381 aa16.35■□□□□ 0.21
RPRD1A-202ENST00000399022 MAP3K15Q6ZN16 1313 aa16.35■□□□□ 0.21
RPRD1A-202ENST00000399022 NRKQ7Z2Y5 1582 aa16.35■□□□□ 0.21
RPRD1A-202ENST00000399022 RTL9Q8NET4 1388 aa16.35■□□□□ 0.21
RPRD1A-202ENST00000399022 TOB2Q14106 344 aaPredicted RBP16.35■□□□□ 0.21
RPRD1A-202ENST00000399022 VPS54Q9P1Q0 977 aa16.35■□□□□ 0.21
RPRD1A-202ENST00000399022 BAIAP2L1Q9UHR4 511 aa16.35■□□□□ 0.21
RPRD1A-202ENST00000399022 WWC3Q9ULE0 1092 aa16.35■□□□□ 0.21
RPRD1A-202ENST00000399022 CTNND2Q9UQB3 1225 aa16.35■□□□□ 0.21
RPRD1A-202ENST00000399022 SYNRGQ9UMZ2 1314 aa16.34■□□□□ 0.21
RPRD1A-202ENST00000399022 PPLO60437 1756 aa16.34■□□□□ 0.21
RPRD1A-202ENST00000399022 A6NNZ2 444 aa16.34■□□□□ 0.21
RPRD1A-202ENST00000399022 PPFIA4O75335 1185 aa16.34■□□□□ 0.21
RPRD1A-202ENST00000399022 TUBB8Q3ZCM7 444 aa16.34■□□□□ 0.21
RPRD1A-202ENST00000399022 IFNL3Q8IZI9 196 aa16.34■□□□□ 0.21
RPRD1A-202ENST00000399022 JAKMIP2Q96AA8 810 aa16.34■□□□□ 0.21
RPRD1A-202ENST00000399022 PCDHA5Q9Y5H7 936 aa16.34■□□□□ 0.21
RPRD1A-202ENST00000399022 AP5Z1O43299 807 aa16.34■□□□□ 0.21
RPRD1A-202ENST00000399022 BMP15O95972 392 aa16.34■□□□□ 0.21
RPRD1A-202ENST00000399022 CMA1P23946 247 aa16.34■□□□□ 0.21
RPRD1A-202ENST00000399022 RNASE9P60153 205 aaKnown RBP16.34■□□□□ 0.21
RPRD1A-202ENST00000399022 RESTQ13127 1097 aa16.34■□□□□ 0.21
RPRD1A-202ENST00000399022 TMEM266Q2M3C6 531 aa16.34■□□□□ 0.21
RPRD1A-202ENST00000399022 TRMT1LQ7Z2T5 733 aaKnown RBP16.34■□□□□ 0.21
RPRD1A-202ENST00000399022 CLIC6Q96NY7 704 aa16.34■□□□□ 0.21
RPRD1A-202ENST00000399022 RTCBQ9Y3I0 505 aaKnown RBP16.34■□□□□ 0.21
RPRD1A-202ENST00000399022 GCOM1H8Y6P7 765 aaPredicted RBP16.34■□□□□ 0.21
RPRD1A-202ENST00000399022 MYZAPP0CAP1 466 aa16.34■□□□□ 0.21
RPRD1A-202ENST00000399022 NAPAP54920 295 aa16.34■□□□□ 0.21
RPRD1A-202ENST00000399022 TADA2BQ86TJ2 420 aa16.34■□□□□ 0.21
RPRD1A-202ENST00000399022 FAM114A1Q8IWE2 563 aa16.34■□□□□ 0.21
RPRD1A-202ENST00000399022 CARD10Q9BWT7 1032 aa16.34■□□□□ 0.21
RPRD1A-202ENST00000399022 E7EVH7 732 aa16.33■□□□□ 0.21
RPRD1A-202ENST00000399022 CALML4Q96GE6 196 aa16.33■□□□□ 0.21
RPRD1A-202ENST00000399022 SELENOSQ9BQE4 189 aa16.33■□□□□ 0.21
RPRD1A-202ENST00000399022 SAP30BPQ9UHR5 308 aaKnown RBP16.33■□□□□ 0.21
RPRD1A-202ENST00000399022 MROH1Q8NDA8 1641 aa16.33■□□□□ 0.2
RPRD1A-202ENST00000399022 BTBD18B2RXH4 712 aa16.33■□□□□ 0.2
RPRD1A-202ENST00000399022 PPANQ9NQ55 473 aaKnown RBP16.33■□□□□ 0.2
RPRD1A-202ENST00000399022 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.33■□□□□ 0.2
RPRD1A-202ENST00000399022 MAP2P11137 1827 aaKnown RBP16.33■□□□□ 0.2
RPRD1A-202ENST00000399022 MROH5Q6ZUA9 1318 aa16.33■□□□□ 0.2
RPRD1A-202ENST00000399022 FRMD3A2A2Y4 597 aa16.33■□□□□ 0.2
RPRD1A-202ENST00000399022 SMIM23A6NLE4 172 aa16.33■□□□□ 0.2
RPRD1A-202ENST00000399022 H7C1W4 665 aa16.33■□□□□ 0.2
RPRD1A-202ENST00000399022 KCNQ4P56696 695 aa16.33■□□□□ 0.2
RPRD1A-202ENST00000399022 GPIHBP1Q8IV16 184 aa16.33■□□□□ 0.2
RPRD1A-202ENST00000399022 RAB34Q9BZG1 259 aa16.33■□□□□ 0.2
RPRD1A-202ENST00000399022 SEC31BQ9NQW1 1179 aa16.33■□□□□ 0.2
RPRD1A-202ENST00000399022 LDHBP07195 334 aaKnown RBP16.33■□□□□ 0.2
RPRD1A-202ENST00000399022 HIBADHP31937 336 aaKnown RBP16.33■□□□□ 0.2
RPRD1A-202ENST00000399022 FAM98CQ17RN3 349 aaKnown RBP16.33■□□□□ 0.2
RPRD1A-202ENST00000399022 LRCH2Q5VUJ6 765 aa16.33■□□□□ 0.2
RPRD1A-202ENST00000399022 E4F1Q66K89 784 aaPredicted RBP16.33■□□□□ 0.2
RPRD1A-202ENST00000399022 PIK3AP1Q6ZUJ8 805 aa16.33■□□□□ 0.2
RPRD1A-202ENST00000399022 AIFM3Q96NN9 605 aa16.33■□□□□ 0.2
RPRD1A-202ENST00000399022 A0A1W2PQ27 194 aa16.32■□□□□ 0.2
RPRD1A-202ENST00000399022 A0A1W2PQ64 194 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms